Pregenerated sensors for LINC02398 (Homo sapiens)

Ensembl gene IDs: ENSG00000256287

Ensembl transcript IDs: ENST00000536666.1

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AATGTGCGAGGCCCTTTAGAAGCTGATATGCAATGTCACCAGGGCTaGCTGTGGCTGGAAGGTCTGAAGAAACTGTTTCCTCTTCTGCCA	+
Preference number: 5 (lower is better) Translates to: NVRGPLEADMQCHQG*LWLEGLKKLFPLLP Trigger: TGGCAGAAGAGGAAACAGTTTCTTCAGACCTTCCAGCCACAGTCAGCCCTGGTGACATTGCATATCAGCTTCTAAAGGGCCTCGCACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536666.1
CDS TCA 72 bp	GGCCCTTTAGAAGCTGATATGCAATGTCACCAGGGCTaGCTGTGGCTGGAAGGTCTGAAGAAACTGTTTCCT	+
Preference number: 6 (lower is better) Translates to: GPLEADMQCHQG*LWLEGLKKLFP Trigger: AGGAAACAGTTTCTTCAGACCTTCCAGCCACAGTCAGCCCTGGTGACATTGCATATCAGCTTCTAAAGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536666.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu