Pregenerated sensors for LINC02397 (Homo sapiens)
Ensembl gene IDs: ENSG00000205056Ensembl transcript IDs: ENST00000504409.3
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTTGGCCAAGTGAACAGGGCATGCAAAGACCTTGCTTCCTCTCTGTaGTGTGGGGAACTGAGACTGTGCCGGGCCTGCAAACGCGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: FGQVNRACKDLASSL*CGELRLCRACKRGE Trigger: CTCACCGCGTTTGCAGGCCCGGCACAGTCTCAGTTCCCCACAGCACAGAGAGGAAGCAAGGTCTTTGCATGCCCTGTTCACTTGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | ACAGGGCATGCAAAGACCTTGCTTCCTCTCTGTGCTGTGGGGAACTaGGACTGTGCCGGGCCTGCAAACGCGGTGAGGAAAAATCCATTT | + |
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Preference number: 5 (lower is better) Translates to: TGHAKTLLPLCAVGN*DCAGPANAVRKNPF Trigger: AAATGGATTTTTCCTCACCGCGTTTGCAGGCCCGGCACAGTCTCAGTTCCCCACAGCACAGAGAGGAAGCAAGGTCTTTGCATGCCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 90 bp | TCCAGGATCCCAGGAACCAATCTGGAACAAAGGACAGGTAAGTCTTaGTTGGAAGCTCCAGGTAGTAAGAGAGCTGGGACTCATCCACCG | + |
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Preference number: 5 (lower is better) Translates to: SRIPGTNLEQRTGKS*LEAPGSKRAGTHPP Trigger: CGGTGGATGAGTCCCAGCTCTCTTACTACCTGGAGCTTCCAAGCAAGACTTACCTGTCCTTTGTTCCAGATTGGTTCCTGGGATCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 90 bp | GACTTTCCCATGCAGGGATCTACTTCCCCGATAGCCAGTTCAGCGTaGATACTCATGCCGATGAGCCTAAGAATGTTTGCCTGTCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: DFPMQGSTSPIASSA*ILMPMSLRMFACQR Trigger: TCTCTGACAGGCAAACATTCTTAGGCTCATCGGCATGAGTATCCACGCTGAACTGGCTATCGGGGAAGTAGATCCCTGCATGGGAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | CTGAGACTGTGCCGGGCCTGCAAACGCGGTGAGGAAAAATCCATTTaGATGCTTACTGCTGAATGGTGCTGGGCATTGTCAGCTTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LRLCRACKRGEEKSI*MLTAEWCWALSAFV Trigger: AACAAAAGCTGACAATGCCCAGCACCATTCAGCAGTAAGCATTCAAATGGATTTTTCCTCACCGCGTTTGCAGGCCCGGCACAGTCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 90 bp | TTGAATTGCACATCTAGGGCAATGTTTGGCCAAGTGAACAGGGCATaGAAAGACCTTGCTTCCTCTCTGTGCTGTGGGGAACTGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: LNCTSRAMFGQVNRA*KDLASSLCCGELRL Trigger: CAGTCTCAGTTCCCCACAGCACAGAGAGGAAGCAAGGTCTTTGCATGCCCTGTTCACTTGGCCAAACATTGCCCTAGATGTGCAATTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 90 bp | GACTGTGCCGGGCCTGCAAACGCGGTGAGGAAAAATCCATTTGAATaGTTACTGCTGAATGGTGCTGGGCATTGTCAGCTTTTGTTTACT | + |
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Preference number: 5 (lower is better) Translates to: DCAGPANAVRKNPFE*LLLNGAGHCQLLFT Trigger: AGTAAACAAAAGCTGACAATGCCCAGCACCATTCAGCAGTAAGCATTCAAATGGATTTTTCCTCACCGCGTTTGCAGGCCCGGCACAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 90 bp | AGCTTTGAGGTTGGTTGGACCATTCCTTCAAATAATAGAGGTGACTaGGAAAAGGGGGCAGGCCATGGAAGAGCTTTATACAGGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SFEVGWTIPSNNRGD*EKGAGHGRALYRVL Trigger: CAGCACCCTGTATAAAGCTCTTCCATGGCCTGCCCCCTTTTCGCAGTCACCTCTATTATTTGAAGGAATGGTCCAACCAACCTCAAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 90 bp | TGTACAAATGTGAAGCATCTCAACTACCATGTAAAGGTGACACGATaGCTTGTCTTCCTCCTTCTGGGGTGTGCAAAAAGCCACACTAGG | + |
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Preference number: 5 (lower is better) Translates to: CTNVKHLNYHVKVTR*LVFLLLGCAKSHTR Trigger: CCTAGTGTGGCTTTTTGCACACCCCAGAAGGAGGAAGACAAGCCATCGTGTCACCTTTACATGGTAGTTGAGATGCTTCACATTTGTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | AGTGGAAAACCTTCTGTGAAGTTGGTGGCTATGTATTTACTGCTGTaGTGGTGGTCTTGCTGGACCAGGGTCTTGGTAGTTTTTAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SGKPSVKLVAMYLLL*WWSCWTRVLVVFKV Trigger: CACCTTAAAAACTACCAAGACCCTGGTCCAGCAAGACCACCATCACAGCAGTAAATACATAGCCACCAACTTCACAGAAGGTTTTCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | GGCAGTGATGATTGGTTTAAAGCAAACAAGATCCGTGGTTGTAGCTaGGAATGGGGTGAATTCCATTCAAACTGCATGGCTAAGCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: GSDDWFKANKIRGCS*EWGEFHSNCMAKQG Trigger: CCCTTGCTTAGCCATGCAGTTTGAATGGAATTCACCCCATTCTCAGCTACAACCACGGATCTTGTTTGCTTTAAACCAATCATCACTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | CCATCAGTGATTGCGCCTTGCCTTGTAGTTCTGTCAGAAGAGAAATaGTTTTCTATTCCAGAGACCCTCACAAAATACCACCTGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PSVIAPCLVVLSEEK*FSIPETLTKYHLSL Trigger: GAGGCTCAGGTGGTATTTTGTGAGGGTCTCTGGAATAGAAAATCATTTCTCTTCTGACAGAACTACAAGGCAAGGCGCAATCACTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 90 bp | ACCTTCACTTTTATTTCCCTTGAGGCTTTCCTCTTCTCTTTGTGTTaGTCCAGGATCCCAGGAACCAATCTGGAACAAAGGACAGGTAAG | + |
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Preference number: 5 (lower is better) Translates to: TFTFISLEAFLFSLC*SRIPGTNLEQRTGK Trigger: CTTACCTGTCCTTTGTTCCAGATTGGTTCCTGGGATCCTGGACCAACACAAAGAGAAGAGGAAAGCCTCAAGGGAAATAAAAGTGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 90 bp | ATTTTCATACAATTCTGGATGCCTAGATCAAGGTATCTGCAGGGTTaGCTTGTTCTGAGGCCTCTCTCCTTGGATTGTAGATGGCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: IFIQFWMPRSRYLQG*LVLRPLSLDCRWPF Trigger: AAACGGCCATCTACAATCCAAGGAGAGAGGCCTCAGAACAAGCCAACCCTGCAGATACCTTGATCTAGGCATCCAGAATTGTATGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 90 bp | TTCTCACTTTTTCTGCTCCCATTTGTAATATCTCCACTAGAGTTCTaGAGCAGTAGCAGCAGCAGCAGCACAGTCTTCAATACCACCAAC | + |
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Preference number: 5 (lower is better) Translates to: FSLFLLPFVISPLEF*SSSSSSSTVFNTTN Trigger: GTTGGTGGTATTGAAGACTGTGCTGCTGCTGCTGCTACTGCTCCAGAACTCTAGTGGAGATATTACAAATGGGAGCAGAAAAAGTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | AGTTGCTGGAACCTGACAATGCCGTGTGCGAGTAATAAGCCATCATaGAATGGTGAAAGAGTCAGGGCTCTTGAATTACGCTTGCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: SCWNLTMPCASNKPS*NGERVRALELRLLY Trigger: ATAAAGCAAGCGTAATTCAAGAGCCCTGACTCTTTCACCATTTCATGATGGCTTATTACTCGCACACGGCATTGTCAGGTTCCAGCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | AATTGTCCTGAACACTTAATTGAGTGTCTTTCCCTGGAATTTGTTTaGAGTGAGTCTCCAAGGCTCGAAACTTCTGGGCCTAGCTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: NCPEHLIECLSLEFV*SESPRLETSGPSSH Trigger: ATGAGAGCTAGGCCCAGAAGTTTCGAGCCTTGGAGACTCACTTCAAACAAATTCCAGGGAAAGACACTCAATTAAGTGTTCAGGACAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 90 bp | AGAACTTTCCCCAGGTGTCTCACAGCTTGCAGAAAGAAAGAATATTaGTCTGCTGGGAACTCTTGTTTTTCAGCCTATGCAGTATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RTFPRCLTACRKKEY*SAGNSCFSAYAVFF Trigger: GAAGAATACTGCATAGGCTGAAAAACAAGAGTTCCCAGCAGACCAATATTCTTTCTTTCTGCAAGCTGTGAGACACCTGGGGAAAGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 90 bp | AGAGAAACTACGGCCTTATTAAATTATCTCTGCTCTCGTGTCTGGTaGCTTTATGTCTCTGTTTCTATGTCTGTGTTCTCTCCTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: RETTALLNYLCSRVW*LYVSVSMSVFSPSL Trigger: GAGAGAAGGAGAGAACACAGACATAGAAACAGAGACATAAAGGCACCAGACACGAGAGCAGAGATAATTTAATAAGGCCGTAGTTTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 90 bp | CTTCACAAACATAGATGGTATAGCCTACTACACACCCAGACTGTATaGTATAGTCTATTGCTTCTGGGCTACAAACCTGTACAGCATGTT | + |
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Preference number: 5 (lower is better) Translates to: LHKHRWYSLLHTQTV*YSLLLLGYKPVQHV Trigger: AACATGCTGTACAGGTTTGTAGCCCAGAAGCAATAGACTATACCATACAGTCTGGGTGTGTAGTAGGCTATACCATCTATGTTTGTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 90 bp | CCCCAGGTGTCTCACAGCTTGCAGAAAGAAAGAATATTGGTCTGCTaGGAACTCTTGTTTTTCAGCCTATGCAGTATTCTTCACATATTA | + |
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Preference number: 5 (lower is better) Translates to: PQVSHSLQKERILVC*ELLFFSLCSILHIL Trigger: TAATATGTGAAGAATACTGCATAGGCTGAAAAACAAGAGTTCCCAGCAGACCAATATTCTTTCTTTCTGCAAGCTGTGAGACACCTGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 90 bp | AAAGAAAGAATATTGGTCTGCTGGGAACTCTTGTTTTTCAGCCTATaGAGTATTCTTCACATATTATTCCCTCTGGGGAACATCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: KERILVCWELLFFSL*SILHILFPLGNIRA Trigger: AGCCCTGATGTTCCCCAGAGGGAATAATATGTGAAGAATACTGCATAGGCTGAAAAACAAGAGTTCCCAGCAGACCAATATTCTTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | AATGGTGCTGGGCATTGTCAGCTTTTGTTTACTTCATCTTACATGTaGAGATCGCAGCTGTTCCTTTCAGTAAAAAGAAGTAGGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: NGAGHCQLLFTSSYM*RSQLFLSVKRSRRM Trigger: CATTCTCCTACTTCTTTTTACTGAAAGGAACAGCTGCGATCTTCACATGTAAGATGAAGTAAACAAAAGCTGACAATGCCCAGCACCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | GGTAGCATCCTCTTTCTAAGGCTAACTCACCTCACATTAGCAGTATaGCAGCCAACAGTTCCTAATATAATGATCTTTATCTTTCACCAT | + |
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Preference number: 5 (lower is better) Translates to: GSILFLRLTHLTLAV*QPTVPNIMIFIFHH Trigger: ATGGTGAAAGATAAAGATCATTATATTAGGAACTGTTGGCTGTCATACTGCTAATGTGAGGTGAGTTAGCCTTAGAAAGAGGATGCTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 90 bp | TACCTCTTTAATGACTATGTCTCCAAACAAAACCATGTTCTGAAGTaGTGGGAGTTAAGACTCAAACATATAAATTTGGGCAGGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: YLFNDYVSKQNHVLK*WELRLKHINLGRMQ Trigger: CTGCATCCTGCCCAAATTTATATGTTTGAGTCTTAACTCCCAGCACTTCAGAACATGGTTTTGTTTGGAGACATAGTCATTAAAGAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 90 bp | CATAAAGCCAAGTGTCACTTAATGTCGGGCATGCATTCTGAGAAATaGATCACTAGGCAACTTCATAATTATGTGAACATCATAGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: HKAKCHLMSGMHSEK*ITRQLHNYVNIIEC Trigger: ACACTCTATGATGTTCACATAATTATGAAGTTGCCTAGTGATGCATTTCTCAGAATGCATGCCCGACATTAAGTGACACTTGGCTTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 90 bp | GATGGAATTTGCTTTTTCTGGAGAGATGTCTACCATAAGATGGTTTaGTTACAGTTATGTTCATGTGAACATAAACATCTCCCAGCCACA | + |
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Preference number: 5 (lower is better) Translates to: DGICFFWRDVYHKMV*LQLCSCEHKHLPAT Trigger: TGTGGCTGGGAGATGTTTATGTTCACATGAACATAACTGTAAGCAAACCATCTTATGGTAGACATCTCTCCAGAAAAAGCAAATTCCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | ATGCCCATGAAATTGTCCAAGGGAAGATGGCTAGTAGTAGTAGAATaGGCTTTAGAGTTGGCTATCAACAAATTTAGTGAAAAACCTAGT | + |
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Preference number: 5 (lower is better) Translates to: MPMKLSKGRWLVVVE*ALELAINKFSEKPS Trigger: ACTAGGTTTTTCACTAAATTTGTTGATAGCCAACTCTAAAGCTCATTCTACTACTACTAGCCATCTTCCCTTGGACAATTTCATGGGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 90 bp | CTCTTTAATGACTATGTCTCCAAACAAAACCATGTTCTGAAGTGCTaGGAGTTAAGACTCAAACATATAAATTTGGGCAGGATGCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: LFNDYVSKQNHVLKC*ELRLKHINLGRMQF Trigger: AAACTGCATCCTGCCCAAATTTATATGTTTGAGTCTTAACTCCCAGCACTTCAGAACATGGTTTTGTTTGGAGACATAGTCATTAAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 90 bp | TATTCATGTACTAGTGAGATTATACTTACTCATTTTTCTTTTCAGTaGAGCGATGCCCATGAAATTGTCCAAGGGAAGATGGCTAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: YSCTSEIILTHFSFQ*SDAHEIVQGKMASS Trigger: ACTACTAGCCATCTTCCCTTGGACAATTTCATGGGCATCGCTTCACTGAAAAGAAAAATGAGTAAGTATAATCTCACTAGTACATGAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | CAGGGCATGCAAAGACCTTGCTTCCTCTCTGTGCTGTaGGGAACTGAGACTGTGCCGGGCCTGCAAACGCGG | + |
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Preference number: 6 (lower is better) Translates to: QGMQRPCFLSVL*GTETVPGLQTR Trigger: CCGCGTTTGCAGGCCCGGCACAGTCTCAGTTCCCCACAGCACAGAGAGGAAGCAAGGTCTTTGCATGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | GCAAAGACCTTGCTTCCTCTCTGTGCTGTGGGGAACTaGGACTGTGCCGGGCCTGCAAACGCGGTGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AKTLLPLCAVGN*DCAGPANAVRK Trigger: TTTCCTCACCGCGTTTGCAGGCCCGGCACAGTCTCAGTTCCCCACAGCACAGAGAGGAAGCAAGGTCTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | GTGAACAGGGCATGCAAAGACCTTGCTTCCTCTCTGTaGTGTGGGGAACTGAGACTGTGCCGGGCCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: VNRACKDLASSL*CGELRLCRACK Trigger: TTTGCAGGCCCGGCACAGTCTCAGTTCCCCACAGCACAGAGAGGAAGCAAGGTCTTTGCATGCCCTGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | CTTGCTTCCTCTCTGTGCTGTGGGGAACTGAGACTGTaGCGGGCCTGCAAACGCGGTGAGGAAAAATCCATT | + |
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Preference number: 6 (lower is better) Translates to: LASSLCCGELRL*RACKRGEEKSI Trigger: AATGGATTTTTCCTCACCGCGTTTGCAGGCCCGGCACAGTCTCAGTTCCCCACAGCACAGAGAGGAAGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | ATGACATTTGAGGTAATCCGGGGCCTTCCGGGTGACTaGGAGCCCAGGGAAGGAAACCATGAGCAGTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: MTFEVIRGLPGD*EPREGNHEQWK Trigger: TTTCCACTGCTCATGGTTTCCTTCCCTGGGCTCCCAGTCACCCGGAAGGCCCCGGATTACCTCAAATGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | CTCCATTGTGGACCAGCTCTACACAGTGGGGATACTTaGCTTTCCCATGCAGGGATCTACTTCCCCGATAGC | + |
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Preference number: 6 (lower is better) Translates to: LHCGPALHSGDT*LSHAGIYFPDS Trigger: GCTATCGGGGAAGTAGATCCCTGCATGGGAAAGTCAAGTATCCCCACTGTGTAGAGCTGGTCCACAATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 90 bp | AGGATCCCAGGAACCAATCTGGAACAAAGGACAGGTAAGTCTTGCTaGGAAGCTCCAGGTAGTAAGAGAGCTGGGACTCATCCACCGGTA | + |
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Preference number: 6 (lower is better) Translates to: RIPGTNLEQRTGKSC*EAPGSKRAGTHPPV Trigger: TACCGGTGGATGAGTCCCAGCTCTCTTACTACCTGGAGCTTCCAAGCAAGACTTACCTGTCCTTTGTTCCAGATTGGTTCCTGGGATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | TGCCGGGCCTGCAAACGCGGTGAGGAAAAATCCATTTaGATGCTTACTGCTGAATGGTGCTGGGCATTGTCA | + |
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Preference number: 6 (lower is better) Translates to: CRACKRGEEKSI*MLTAEWCWALS Trigger: TGACAATGCCCAGCACCATTCAGCAGTAAGCATTCAAATGGATTTTTCCTCACCGCGTTTGCAGGCCCGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | GGGGCAGGCCATGGAAGAGCTTTATACAGGGTGCTGTaGCTGCTTCCTATACCACCACAAATCTTCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: GAGHGRALYRVL*LLPIPPQIFRE Trigger: TTCCCTGAAGATTTGTGGTGGTATAGGAAGCAGTCACAGCACCCTGTATAAAGCTCTTCCATGGCCTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | AATGTTTGGCCAAGTGAACAGGGCATGCAAAGACCTTaGTTCCTCTCTGTGCTGTGGGGAACTGAGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: NVWPSEQGMQRP*FLSVLWGTETV Trigger: CACAGTCTCAGTTCCCCACAGCACAGAGAGGAAGCAAGGTCTTTGCATGCCCTGTTCACTTGGCCAAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | ATGCAGGGATCTACTTCCCCGATAGCCAGTTCAGCGTaGATACTCATGCCGATGAGCCTAAGAATGTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: MQGSTSPIASSA*ILMPMSLRMFA Trigger: GGCAAACATTCTTAGGCTCATCGGCATGAGTATCCACGCTGAACTGGCTATCGGGGAAGTAGATCCCTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | TGGCTTGTTCTGAGGCCTCTCTCCTTGGATTGTAGATaGCCGTTTCCTCTCTGTGTCTTCTTCGCATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: WLVLRPLSLDCR*PFPLCVFFAWS Trigger: AGACCATGCGAAGAAGACACAGAGAGGAAACGGCCATCTACAATCCAAGGAGAGAGGCCTCAGAACAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | CTCCCTCTTTACCCTCAGGCGGCCTGGCTATTCAGCTaGGCTCTAGAATCTTCATCTGCTTCCTTTCATTCT | + |
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Preference number: 6 (lower is better) Translates to: LPLYPQAAWLFS*ALESSSASFHS Trigger: AGAATGAAAGGAAGCAGATGAAGATTCTAGAGCCCAGCTGAATAGCCAGGCCGCCTGAGGGTAAAGAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | TATCTGCAGGGTTGGCTTGTTCTGAGGCCTCTCTCCTaGGATTGTAGATGGCCGTTTCCTCTCTGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YLQGWLVLRPLS*DCRWPFPLCVF Trigger: GAAGACACAGAGAGGAAACGGCCATCTACAATCCAAGGAGAGAGGCCTCAGAACAAGCCAACCCTGCAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | GGGCCTGCAAACGCGGTGAGGAAAAATCCATTTGAATaGTTACTGCTGAATGGTGCTGGGCATTGTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GPANAVRKNPFE*LLLNGAGHCQL Trigger: AAGCTGACAATGCCCAGCACCATTCAGCAGTAAGCATTCAAATGGATTTTTCCTCACCGCGTTTGCAGGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | TTGCCTGTCAGAGATAAACACTGCATTTCTGCCTGCTaGACACAGAGTTGCTGGAACCTGACAATGCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: LPVRDKHCISAC*TQSCWNLTMPC Trigger: ACACGGCATTGTCAGGTTCCAGCAACTCTGTGTGCAGCAGGCAGAAATGCAGTGTTTATCTCTGACAGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | CCAGGAACCAATCTGGAACAAAGGACAGGTAAGTCTTaGTTGGAAGCTCCAGGTAGTAAGAGAGCTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: PGTNLEQRTGKS*LEAPGSKRAGT Trigger: AGTCCCAGCTCTCTTACTACCTGGAGCTTCCAAGCAAGACTTACCTGTCCTTTGTTCCAGATTGGTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | CCTTCTGTGAAGTTGGTGGCTATGTATTTACTGCTGTaGTGGTGGTCTTGCTGGACCAGGGTCTTGGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: PSVKLVAMYLLL*WWSCWTRVLVV Trigger: AACTACCAAGACCCTGGTCCAGCAAGACCACCATCACAGCAGTAAATACATAGCCACCAACTTCACAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | ATTGCCAGAGGCTTGGAGATGCAGGCCCCTGGCTTCTaGGATTTCTTGAGGTATTTTCACCTTGTTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: IARGLEMQAPGF*DFLRYFHLVSQ Trigger: TTGGGAAACAAGGTGAAAATACCTCAAGAAATCTCAGAAGCCAGGGGCCTGCATCTCCAAGCCTCTGGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | AAAAGGGGGCAGGCCATGGAAGAGCTTTATACAGGGTaGTGTGACTGCTTCCTATACCACCACAAATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KRGQAMEELYTG*CDCFLYHHKSS Trigger: TGAAGATTTGTGGTGGTATAGGAAGCAGTCACAGCACCCTGTATAAAGCTCTTCCATGGCCTGCCCCCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | GAACCAATCTGGAACAAAGGACAGGTAAGTCTTGCTTaGAAGCTCCAGGTAGTAAGAGAGCTGGGACTCATC | + |
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Preference number: 6 (lower is better) Translates to: EPIWNKGQVSLA*KLQVVRELGLI Trigger: GATGAGTCCCAGCTCTCTTACTACCTGGAGCTTCCAAGCAAGACTTACCTGTCCTTTGTTCCAGATTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | GTGAAGCATCTCAACTACCATGTAAAGGTGACACGATaGCTTGTCTTCCTCCTTCTGGGGTGTGCAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: VKHLNYHVKVTR*LVFLLLGCAKS Trigger: GCTTTTTGCACACCCCAGAAGGAGGAAGACAAGCCATCGTGTCACCTTTACATGGTAGTTGAGATGCTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | GGAACCAATCTGGAACAAAGGACAGGTAAGTCTTGCTaGGAAGCTCCAGGTAGTAAGAGAGCTGGGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: GTNLEQRTGKSC*EAPGSKRAGTH Trigger: ATGAGTCCCAGCTCTCTTACTACCTGGAGCTTCCAAGCAAGACTTACCTGTCCTTTGTTCCAGATTGGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | GATTTTCTATTCCAGAGACCCTCACAAAATACCACCTaGGCCTCATTGGTCCAAAGCGGTCATGTGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: DFLFQRPSQNTT*ASLVQSGHVFT Trigger: GGTGAACACATGACCGCTTTGGACCAATGAGGCTCAGGTGGTATTTTGTGAGGGTCTCTGGAATAGAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | CAGGCCATGGAAGAGCTTTATACAGGGTGCTGTGACTaGTTCCTATACCACCACAAATCTTCAGGGAAAATG | + |
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Preference number: 6 (lower is better) Translates to: QAMEELYTGCCD*FLYHHKSSGKM Trigger: CATTTTCCCTGAAGATTTGTGGTGGTATAGGAAGCAGTCACAGCACCCTGTATAAAGCTCTTCCATGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | GTTGGTTGGACCATTCCTTCAAATAATAGAGGTGACTaGGAAAAGGGGGCAGGCCATGGAAGAGCTTTATAC | + |
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Preference number: 6 (lower is better) Translates to: VGWTIPSNNRGD*EKGAGHGRALY Trigger: GTATAAAGCTCTTCCATGGCCTGCCCCCTTTTCGCAGTCACCTCTATTATTTGAAGGAATGGTCCAACCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | CTAAGGCAGTGTTGTGGAGCTCAGCGTACCTTTAAATaGCAAACCAGAGTCTTTAAGAGTCCAGCCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: LRQCCGAQRTFK*QTRVFKSPAKS Trigger: GGATTTGGCTGGACTCTTAAAGACTCTGGTTTGCCATTTAAAGGTACGCTGAGCTCCACAACACTGCCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | CCTCCTCCAAATGTTTGTGGAGCCCAACAGCTGTCTTaGCAAATCCTGTCACTCAGGATTGGAATGGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: PPPNVCGAQQLS*QILSLRIGMVL Trigger: TAGAACCATTCCAATCCTGAGTGACAGGATTTGCAAAGACAGCTGTTGGGCTCCACAAACATTTGGAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | CAAATATCTAGAGTGAGGATAGAAACCACAAGAAAATaGCCAGAGGCTTGGAGATGCAGGCCCCTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: QISRVRIETTRK*PEAWRCRPLAS Trigger: AGAAGCCAGGGGCCTGCATCTCCAAGCCTCTGGCAATTTTCTTGTGGTTTCTATCCTCACTCTAGATATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | CCAAATGTGGAGAACTTTCCCCAGGTGTCTCACAGCTaGCAGAAAGAAAGAATATTGGTCTGCTGGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: PNVENFPQVSHS*QKERILVCWEL Trigger: GAGTTCCCAGCAGACCAATATTCTTTCTTTCTGCAAGCTGTGAGACACCTGGGGAAAGTTCTCCACATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | GCCTACTACACACCCAGACTGTATGGTATAGTCTATTaGTTCTGGGCTACAAACCTGTACAGCATGTTACAG | + |
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Preference number: 6 (lower is better) Translates to: AYYTPRLYGIVY*FWATNLYSMLQ Trigger: CTGTAACATGCTGTACAGGTTTGTAGCCCAGAAGCAATAGACTATACCATACAGTCTGGGTGTGTAGTAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | TTTCTGCTCCCATTTGTAATATCTCCACTAGAGTTCTaGAGCAGTAGCAGCAGCAGCAGCACAGTCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FLLPFVISPLEF*SSSSSSSTVFN Trigger: ATTGAAGACTGTGCTGCTGCTGCTGCTACTGCTCCAGAACTCTAGTGGAGATATTACAAATGGGAGCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 90 bp | ACTGAAACCTTCACTTTTATTTCCCTTGAGGCTTTCCTCTTCTCTTaGTGTTGGTCCAGGATCCCAGGAACCAATCTGGAACAAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: TETFTFISLEAFLFS*CWSRIPGTNLEQRT Trigger: TGTCCTTTGTTCCAGATTGGTTCCTGGGATCCTGGACCAACACAAAGAGAAGAGGAAAGCCTCAAGGGAAATAAAAGTGAAGGTTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | GAACACTTAATTGAGTGTCTTTCCCTGGAATTTGTTTaGAGTGAGTCTCCAAGGCTCGAAACTTCTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: EHLIECLSLEFV*SESPRLETSGP Trigger: AGGCCCAGAAGTTTCGAGCCTTGGAGACTCACTTCAAACAAATTCCAGGGAAAGACACTCAATTAAGTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | AGCCTACTACACACCCAGACTGTATGGTATAGTCTATaGCTTCTGGGCTACAAACCTGTACAGCATGTTACA | + |
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Preference number: 6 (lower is better) Translates to: SLLHTQTVWYSL*LLGYKPVQHVT Trigger: TGTAACATGCTGTACAGGTTTGTAGCCCAGAAGCAATAGACTATACCATACAGTCTGGGTGTGTAGTAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 90 bp | GAGAACTTTCCCCAGGTGTCTCACAGCTTGCAGAAAGAAAGAATATaGGTCTGCTGGGAACTCTTGTTTTTCAGCCTATGCAGTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: ENFPQVSHSLQKERI*VCWELLFFSLCSIL Trigger: AAGAATACTGCATAGGCTGAAAAACAAGAGTTCCCAGCAGACCAATATTCTTTCTTTCTGCAAGCTGTGAGACACCTGGGGAAAGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | GATTGGTTTAAAGCAAACAAGATCCGTGGTTGTAGCTaGGAATGGGGTGAATTCCATTCAAACTGCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: DWFKANKIRGCS*EWGEFHSNCMA Trigger: AGCCATGCAGTTTGAATGGAATTCACCCCATTCTCAGCTACAACCACGGATCTTGTTTGCTTTAAACCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | TGGGATTGCAATCTCTTTCCTTCTAAGGCAGTGATTTaGTCCAATGCAAAACTTTTCCTCCTCTCCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: WDCNLFPSKAVI*SNAKLFLLSIV Trigger: CACAATGGAGAGGAGGAAAAGTTTTGCATTGGACCAAATCACTGCCTTAGAAGGAAAGAGATTGCAATCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | CATAGATGGTATAGCCTACTACACACCCAGACTGTATaGTATAGTCTATTGCTTCTGGGCTACAAACCTGTA | + |
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Preference number: 6 (lower is better) Translates to: HRWYSLLHTQTV*YSLLLLGYKPV Trigger: TACAGGTTTGTAGCCCAGAAGCAATAGACTATACCATACAGTCTGGGTGTGTAGTAGGCTATACCATCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | TCAGCCTATGCAGTATTCTTCACATATTATTCCCTCTaGGGAACATCAGGGCTAATGCAAGTACACAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SAYAVFFTYYSL*GTSGLMQVHSS Trigger: TGAACTGTGTACTTGCATTAGCCCTGATGTTCCCCAGAGGGAATAATATGTGAAGAATACTGCATAGGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | TGTGGTTTTCACAATGTCTCAGTGGAAAACCTTCTGTaGAGTTGGTGGCTATGTATTTACTGCTGTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: CGFHNVSVENLL*SWWLCIYCCDG Trigger: ACCATCACAGCAGTAAATACATAGCCACCAACTTCACAGAAGGTTTTCCACTGAGACATTGTGAAAACCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | GACTTGCAGAACTCACAGGAATGTGAAACTGGGGTCTaGAACTTAAGCTTCAATGGCTTCAGGGTAAAATTA | + |
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Preference number: 6 (lower is better) Translates to: DLQNSQECETGV*NLSFNGFRVKL Trigger: TAATTTTACCCTGAAGCCATTGAAGCTTAAGTTTCAGACCCCAGTTTCACATTCCTGTGAGTTCTGCAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | TATTTTGGGGCAAATTTCCAGAGCTTTGAGGTTGGTTaGACCATTCCTTCAAATAATAGAGGTGACTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: YFGANFQSFEVG*TIPSNNRGDCE Trigger: TTCGCAGTCACCTCTATTATTTGAAGGAATGGTCCAACCAACCTCAAAGCTCTGGAAATTTGCCCCAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | CAACAAGAAACTCTGACACTGCCGGTAATTCATTCTTaGCCATTGTGGTTGAAATACTCCATCCATCACTGT | + |
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Preference number: 6 (lower is better) Translates to: QQETLTLPVIHS*PLWLKYSIHHC Trigger: ACAGTGATGGATGGAGTATTTCAACCACAATGGCAAAGAATGAATTACCGGCAGTGTCAGAGTTTCTTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | TCTGATATGAAAAGTCCTCATGAGGCAGGGCCATCTTaGGTACGTGCTATGATAAATCTAGTTAGGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SDMKSPHEAGPS*VRAMINLVRQN Trigger: ATTCTGCCTAACTAGATTTATCATAGCACGTACCAAAGATGGCCCTGCCTCATGAGGACTTTTCATATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 90 bp | GGAAATTCAGTGTCTACATGTCCAATTACCCTCTCATTAGCTATTTaGAAATGGCAAATAGAGGAGACTATTTTGGGGGCCCAGGGAATT | + |
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Preference number: 6 (lower is better) Translates to: GNSVSTCPITLSLAI*KWQIEETILGAQGI Trigger: AATTCCCTGGGCCCCCAAAATAGTCTCCTCTATTTGCCATTTCAAAATAGCTAATGAGAGGGTAATTGGACATGTAGACACTGAATTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 90 bp | AAAGCGGTCATGTGTTCACCTTTAAATCAATCAAAGGCCAGAAAATaGGGCAGTGATGATTGGTTTAAAGCAAACAAGATCCGTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: KAVMCSPLNQSKARK*GSDDWFKANKIRGC Trigger: ACAACCACGGATCTTGTTTGCTTTAAACCAATCATCACTGCCCAATTTTCTGGCCTTTGATTGATTTAAAGGTGAACACATGACCGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | TTACATGAGGGAATATTATTATCTAAGGGTCTGATATaGAAAGTCCTCATGAGGCAGGGCCATCTTTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LHEGILLSKGLI*KVLMRQGHLWY Trigger: GTACCAAAGATGGCCCTGCCTCATGAGGACTTTTCATATCAGACCCTTAGATAATAATATTCCCTCATGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | GACTATGTCTCCAAACAAAACCATGTTCTGAAGTGCTaGGAGTTAAGACTCAAACATATAAATTTGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: DYVSKQNHVLKC*ELRLKHINLGR Trigger: CCTGCCCAAATTTATATGTTTGAGTCTTAACTCCCAGCACTTCAGAACATGGTTTTGTTTGGAGACATAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | TCTCACAGCTTGCAGAAAGAAAGAATATTGGTCTGCTaGGAACTCTTGTTTTTCAGCCTATGCAGTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: SHSLQKERILVC*ELLFFSLCSIL Trigger: AAGAATACTGCATAGGCTGAAAAACAAGAGTTCCCAGCAGACCAATATTCTTTCTTTCTGCAAGCTGTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | GGGCATTGTCAGCTTTTGTTTACTTCATCTTACATGTaGAGATCGCAGCTGTTCCTTTCAGTAAAAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GHCQLLFTSSYM*RSQLFLSVKRS Trigger: ACTTCTTTTTACTGAAAGGAACAGCTGCGATCTTCACATGTAAGATGAAGTAAACAAAAGCTGACAATGCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | AGCTTTATGATTTCCCCTACACTTTGGTCTGGGTGGTaGTTGTATTCAATTGGGCTTTCATGGAAATACTAT | + |
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Preference number: 6 (lower is better) Translates to: SFMISPTLWSGW*LYSIGLSWKYY Trigger: ATAGTATTTCCATGAAAGCCCAATTGAATACAATCACCACCCAGACCAAAGTGTAGGGGAAATCATAAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | AAGTGTCACTTAATGTCGGGCATGCATTCTGAGAAATaGATCACTAGGCAACTTCATAATTATGTGAACATC | + |
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Preference number: 6 (lower is better) Translates to: KCHLMSGMHSEK*ITRQLHNYVNI Trigger: GATGTTCACATAATTATGAAGTTGCCTAGTGATGCATTTCTCAGAATGCATGCCCGACATTAAGTGACACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | AAACTTAAGCTTCAATGGCTTCAGGGTAAAATTATTTaGGGGCAAATTTCCAGAGCTTTGAGGTTGGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KLKLQWLQGKII*GQISRALRLVG Trigger: TCCAACCAACCTCAAAGCTCTGGAAATTTGCCCCAAAATAATTTTACCCTGAAGCCATTGAAGCTTAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS GCA 72 bp | AATGACTATGTCTCCAAACAAAACCATGTTCTGAAGTaGTGGGAGTTAAGACTCAAACATATAAATTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: NDYVSKQNHVLK*WELRLKHINLG Trigger: GCCCAAATTTATATGTTTGAGTCTTAACTCCCAGCACTTCAGAACATGGTTTTGTTTGGAGACATAGTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CAA 72 bp | GTATTCCTTCTTCTTGTCTCCAAAGCTGAGTCTTGTTaGCTAGCTATAGAAGAACAGCATGCTATTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: VFLLLVSKAESC*LAIEEQHAIYS Trigger: TGAATAAATAGCATGCTGTTCTTCTATAGCTAGCAAACAAGACTCAGCTTTGGAGACAAGAAGAAGGAATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | AAATTGTCCAAGGGAAGATGGCTAGTAGTAGTAGAATaGGCTTTAGAGTTGGCTATCAACAAATTTAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: KLSKGRWLVVVE*ALELAINKFSE Trigger: TTCACTAAATTTGTTGATAGCCAACTCTAAAGCTCATTCTACTACTACTAGCCATCTTCCCTTGGACAATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS TCA 72 bp | ATTGAGCTCACAAGAGCTCAAGGGTTACAAACTTGCTaGATTCACTTAGACTTTAACTCATTCATCCAATAT | + |
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Preference number: 6 (lower is better) Translates to: IELTRAQGLQTC*IHLDFNSFIQY Trigger: ATATTGGATGAATGAGTTAAAGTCTAAGTGAATTCAGCAAGTTTGTAACCCTTGAGCTCTTGTGAGCTCAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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| CDS CCA 72 bp | GAATTTGCTTTTTCTGGAGAGATGTCTACCATAAGATaGTTTGCTTACAGTTATGTTCATGTGAACATAAAC | + |
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Preference number: 6 (lower is better) Translates to: EFAFSGEMSTIR*FAYSYVHVNIN Trigger: GTTTATGTTCACATGAACATAACTGTAAGCAAACCATCTTATGGTAGACATCTCTCCAGAAAAAGCAAATTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504409.3 |
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