Pregenerated sensors for LINC02396 (Homo sapiens)
Ensembl gene IDs: ENSG00000258135Ensembl transcript IDs: ENST00000546911.5, ENST00000550636.1, ENST00000551922.5, ENST00000552628.1, ENST00000552768.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCACAAGAGGTGAATGGGCCAGGCCAGCTCAGGCATCAGGCTGCTTaGTCCCTCCTGGGTATAGCCGGGCCTCAGCTGTGGCAGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: PQEVNGPGQLRHQAA*SLLGIAGPQLWQPF Trigger: GAAAGGCTGCCACAGCTGAGGCCCGGCTATACCCAGGAGGGAGCAAGCAGCCTGATGCCTGAGCTGGCCTGGCCCATTCACCTCTTGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS GCA 90 bp | CTCCTTCCAGGCCCACGCCATGGCAGTCCCTCCCACTCCGCAGTCTaGTTTTGTTGCCAGCTCTGTCTGGGGCAAGTGTGGGTTGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: LLPGPRHGSPSHSAV*FCCQLCLGQVWVGG Trigger: ACCGCCAACCCACACTTGCCCCAGACAGAGCTGGCAACAAAAGCAGACTGCGGAGTGGGAGGGACTGCCATGGCGTGGGCCTGGAAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CCA 90 bp | TCTGGCCGCAGGCATTGCCTCTCTCCTCCTTCCAGGCCCACGCCATaGCAGTCCCTCCCACTCCGCAGTCTGCTTTTGTTGCCAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SGRRHCLSPPSRPTP*QSLPLRSLLLLPAL Trigger: CAGAGCTGGCAACAAAAGCAGACTGCGGAGTGGGAGGGACTGCCATGGCGTGGGCCTGGAAGGAGGAGAGAGGCAATGCCTGCGGCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CCA 90 bp | CCAGCCGGGAATATTTTCAGGGCTGCTCTGAGGGGAGCGAAGGTCTaGCCGCAGGCATTGCCTCTCTCCTCCTTCCAGGCCCACGCCATG | + |
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Preference number: 5 (lower is better) Translates to: PAGNIFRAALRGAKV*PQALPLSSFQAHAM Trigger: CATGGCGTGGGCCTGGAAGGAGGAGAGAGGCAATGCCTGCGGCCAGACCTTCGCTCCCCTCAGAGCAGCCCTGAAAATATTCCCGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS TCA 90 bp | CCCCGCGTAGGCACCATCAGCTCAAGAGGGTTTCAGCGACAACACTaGGGCTGGGAGTCGGGGAGGAGTTGGGAGGGTCTCAGACCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PRVGTISSRGFQRQH*GWESGRSWEGLRPP Trigger: AGGAGGTCTGAGACCCTCCCAACTCCTCCCCGACTCCCAGCCTCAGTGTTGTCGCTGAAACCCTCTTGAGCTGATGGTGCCTACGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 90 bp | ATAGCCGGGCCTCAGCTGTGGCAGCCTTTCACACCCTTCAAAGCCTaGCATCACCCTGCAGGCCCCTGGCCCCTACCCTTCTCACTGTTC | + |
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Preference number: 5 (lower is better) Translates to: IAGPQLWQPFTPFKA*HHPAGPWPLPFSLF Trigger: GAACAGTGAGAAGGGTAGGGGCCAGGGGCCTGCAGGGTGATGGCAGGCTTTGAAGGGTGTGAAAGGCTGCCACAGCTGAGGCCCGGCTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS CCA 90 bp | ATGGCTCTTGTGGAGGGTCAGAGCCCGGCTCTGGAGCAGGCTGCGTaGGTCCCAATCCTGGCCCTGCACAAGACGCTTGACTTCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: MALVEGQSPALEQAA*VPILALHKTLDFSV Trigger: CACAGAGAAGTCAAGCGTCTTGTGCAGGGCCAGGATTGGGACCCACGCAGCCTGCTCCAGAGCCGGGCTCTGACCCTCCACAAGAGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546911.5 ENST00000550636.1 ENST00000551922.5 ENST00000552768.1 |
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| CDS CCA 90 bp | CATCAGGCTGCTTGCTCCCTCCTGGGTATAGCCGGGCCTCAGCTGTaGCAGCCTTTCACACCCTTCAAAGCCTGCCATCACCCTGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: HQAACSLLGIAGPQL*QPFTPFKACHHPAG Trigger: GCCTGCAGGGTGATGGCAGGCTTTGAAGGGTGTGAAAGGCTGCCACAGCTGAGGCCCGGCTATACCCAGGAGGGAGCAAGCAGCCTGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS TCA 90 bp | CCGTGGAGAGGCAAAGACCAGCCGGGAATATTTTCAGGGCTGCTCTaGGGGGAGCGAAGGTCTGGCCGCAGGCATTGCCTCTCTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PWRGKDQPGIFSGLL*GERRSGRRHCLSPP Trigger: AGGAGGAGAGAGGCAATGCCTGCGGCCAGACCTTCGCTCCCCTCAGAGCAGCCCTGAAAATATTCCCGGCTGGTCTTTGCCTCTCCACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS TCA 90 bp | AAACGCGGGACAAGAAGCCGAAGCCTCGGGCAGGCATCGGCATTCTaGGTCGCCATGCTTCCCAGCTGCAGGAATTGCTGGGTCAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: KRGTRSRSLGQASAF*VAMLPSCRNCWVRC Trigger: ACACCTGACCCAGCAATTCCTGCAGCTGGGAAGCATGGCGACTCAGAATGCCGATGCCTGCCCGAGGCTTCGGCTTCTTGTCCCGCGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS GCA 90 bp | TGTGACCGTGGAGAGGCAAAGACCAGCCGGGAATATTTTCAGGGCTaGTCTGAGGGGAGCGAAGGTCTGGCCGCAGGCATTGCCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: CDRGEAKTSREYFQG*SEGSEGLAAGIASL Trigger: GAGAGAGGCAATGCCTGCGGCCAGACCTTCGCTCCCCTCAGAGCAGCCCTGAAAATATTCCCGGCTGGTCTTTGCCTCTCCACGGTCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 90 bp | TGCTGGGCTGGTGGTGGAGGTGTGGGACTCCTTAGCTCATTAGCATaGAGACAGTGGCTGAACCCTGGAGTCAGTGAGCACCCCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: CWAGGGGVGLLSSLA*RQWLNPGVSEHPHC Trigger: GCAGTGGGGGTGCTCACTGACTCCAGGGTTCAGCCACTGTCTGCATGCTAATGAGCTAAGGAGTCCCACACCTCCACCACCAGCCCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CCA 90 bp | TCACCCACAGTAAGAAGGTTCTCAGGTTGGGCCACAAGAGGTGAATaGGCCAGGCCAGCTCAGGCATCAGGCTGCTTGCTCCCTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SPTVRRFSGWATRGE*ARPAQASGCLLPPG Trigger: CCCAGGAGGGAGCAAGCAGCCTGATGCCTGAGCTGGCCTGGCCCATTCACCTCTTGTGGCCCAACCTGAGAACCTTCTTACTGTGGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CCA 90 bp | GGTGGTGGAGGTGTGGGACTCCTTAGCTCATTAGCATGCAGACAGTaGCTGAACCCTGGAGTCAGTGAGCACCCCCACTGCAGAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GGGGVGLLSSLACRQ*LNPGVSEHPHCRVR Trigger: CCTCACTCTGCAGTGGGGGTGCTCACTGACTCCAGGGTTCAGCCACTGTCTGCATGCTAATGAGCTAAGGAGTCCCACACCTCCACCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 90 bp | CAAGAAGCCGAAGCCTCGGGCAGGCATCGGCATTCTGAGTCGCCATaGTTCCCAGCTGCAGGAATTGCTGGGTCAGGTGTGAAACCACAT | + |
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Preference number: 5 (lower is better) Translates to: QEAEASGRHRHSESP*FPAAGIAGSGVKPH Trigger: ATGTGGTTTCACACCTGACCCAGCAATTCCTGCAGCTGGGAAGCATGGCGACTCAGAATGCCGATGCCTGCCCGAGGCTTCGGCTTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS TCA 90 bp | CCTCTCTGTAGAATTCCCCCTGCCATCTTCATCACGAGGCTGCTGTaGCCGTGGAGAGGCAAAGACCAGCCGGGAATATTTTCAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLCRIPPAIFITRLL*PWRGKDQPGIFSGL Trigger: CAGCCCTGAAAATATTCCCGGCTGGTCTTTGCCTCTCCACGGTCACAGCAGCCTCGTGATGAAGATGGCAGGGGGAATTCTACAGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 90 bp | ATTCTCACCAATAACCCCCTGACACACAGACCCGCACACCCAGCCTaGACCACTCTCTGCCTCCTCACCGTGCAAGAAAAGAGAGAACCT | + |
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Preference number: 5 (lower is better) Translates to: ILTNNPLTHRPAHPA*TTLCLLTVQEKREP Trigger: AGGTTCTCTCTTTTCTTGCACGGTGAGGAGGCAGAGAGTGGTGCAGGCTGGGTGTGCGGGTCTGTGTGTCAGGGGGTTATTGGTGAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS TCA 90 bp | CTGAGTCCCTGGGAGAATGATACCATTATGAAAAGGGAAAGGAGCTaGGGTGCTTGGGCGGGGGTCAGGTTGAGTTTGAGGGCCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: LSPWENDTIMKRERS*GAWAGVRLSLRACR Trigger: CCTACAGGCCCTCAAACTCAACCTGACCCCCGCCCAAGCACCTCAGCTCCTTTCCCTTTTCATAATGGTATCATTCTCCCAGGGACTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 90 bp | CTTGGTAGGCCTGGCACAGGCCCTGGGTTCTGTTGCCATCGCATGTaGCGCTATGTGCATACATTTCCGTTTCTCCACCAGATGGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: LGRPGTGPGFCCHRM*RYVHTFPFLHQMES Trigger: ACTTTCCATCTGGTGGAGAAACGGAAATGTATGCACATAGCGGCACATGCGATGGCAACAGAACCCAGGGCCTGTGCCAGGCCTACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000551922.5 |
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| CDS GCA 90 bp | CCTGTCCTCTCTGTAGAATTCCCCCTGCCATCTTCATCACGAGGCTaGTGTGACCGTGGAGAGGCAAAGACCAGCCGGGAATATTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: PVLSVEFPLPSSSRG*CDRGEAKTSREYFQ Trigger: CTGAAAATATTCCCGGCTGGTCTTTGCCTCTCCACGGTCACAGCAGCCTCGTGATGAAGATGGCAGGGGGAATTCTACAGAGAGGACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 90 bp | GCCCTCGAAAAGTCAGTTCTTTCCCCAGGGTCTCACGGGTTCTGTTaGCATCGCATGTGCCGCTATGTGCATACATTTCCGTTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: ALEKSVLSPGSHGFC*HRMCRYVHTFPFLH Trigger: GTGGAGAAACGGAAATGTATGCACATAGCGGCACATGCGATGGCAACAGAACCCGTGAGACCCTGGGGAAAGAACTGACTTTTCGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552628.1 |
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| CDS TCA 90 bp | GGCATCAAAAAGGGCAAAGGTGTGAAGACTGAGTCCCTGGGAGAATaGTACCATTATGAAAAGGGAAAGGAGCTGAGGTGCTTGGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: GIKKGKGVKTESLGE*YHYEKGKELRCLGG Trigger: CCCGCCCAAGCACCTCAGCTCCTTTCCCTTTTCATAATGGTATCATTCTCCCAGGGACTCAGTCTTCACACCTTTGCCCTTTTTGATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 90 bp | TCAGTTCTTTCCCCAGGGTCTCACGGGTTCTGTTGCCATCGCATGTaGCGCTATGTGCATACATTTCCGTTTCTCCACCAGATGGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: SVLSPGSHGFCCHRM*RYVHTFPFLHQMES Trigger: ACTTTCCATCTGGTGGAGAAACGGAAATGTATGCACATAGCGGCACATGCGATGGCAACAGAACCCGTGAGACCCTGGGGAAAGAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552628.1 |
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| CDS GCA 90 bp | GTGCCGCTATGTGCATACATTTCCGTTTCTCCACCAGATGGAAAGTaGCTTAAAGATATGGGTTGTGTATCTCAAGCCTTCCTGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VPLCAYISVSPPDGK*LKDMGCVSQAFLLH Trigger: ATGGAGCAGGAAGGCTTGAGATACACAACCCATATCTTTAAGGCACTTTCCATCTGGTGGAGAAACGGAAATGTATGCACATAGCGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000550636.1 ENST00000551922.5 ENST00000552628.1 |
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| CDS CCA 72 bp | GTGGAGGGTCAGAGCCCGGCTCTGGAGCAGGCTGCGTaGGTCCCAATCCTGGCCCTGCACAAGACGCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: VEGQSPALEQAA*VPILALHKTLD Trigger: GTCAAGCGTCTTGTGCAGGGCCAGGATTGGGACCCACGCAGCCTGCTCCAGAGCCGGGCTCTGACCCTCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546911.5 ENST00000550636.1 ENST00000551922.5 ENST00000552768.1 |
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| CDS GCA 72 bp | GTGAATGGGCCAGGCCAGCTCAGGCATCAGGCTGCTTaGTCCCTCCTGGGTATAGCCGGGCCTCAGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VNGPGQLRHQAA*SLLGIAGPQLW Trigger: CCACAGCTGAGGCCCGGCTATACCCAGGAGGGAGCAAGCAGCCTGATGCCTGAGCTGGCCTGGCCCATTCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS CCA 72 bp | GCCCGGCTCTGGAGCAGGCTGCGTGGGTCCCAATCCTaGCCCTGCACAAGACGCTTGACTTCTCTGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: ARLWSRLRGSQS*PCTRRLTSLCL Trigger: GAGGCACAGAGAAGTCAAGCGTCTTGTGCAGGGCCAGGATTGGGACCCACGCAGCCTGCTCCAGAGCCGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546911.5 ENST00000550636.1 ENST00000551922.5 ENST00000552768.1 |
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| CDS CAA 72 bp | GGTGAATGGGCCAGGCCAGCTCAGGCATCAGGCTGCTaGCTCCCTCCTGGGTATAGCCGGGCCTCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GEWARPAQASGC*LPPGYSRASAV Trigger: CACAGCTGAGGCCCGGCTATACCCAGGAGGGAGCAAGCAGCCTGATGCCTGAGCTGGCCTGGCCCATTCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS GCA 72 bp | GGCCCACGCCATGGCAGTCCCTCCCACTCCGCAGTCTaGTTTTGTTGCCAGCTCTGTCTGGGGCAAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GPRHGSPSHSAV*FCCQLCLGQVW Trigger: CCACACTTGCCCCAGACAGAGCTGGCAACAAAAGCAGACTGCGGAGTGGGAGGGACTGCCATGGCGTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CCA 72 bp | GTGGAGATGTCCTGTAGGCAGTTGGCCAGAGGTTCCTaGTGCCCAGGAGAGAGGTCCGGGCAAGGCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VEMSCRQLARGS*CPGERSGQGLL Trigger: GAGGAGGCCTTGCCCGGACCTCTCTCCTGGGCACCAGGAACCTCTGGCCAACTGCCTACAGGACATCTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CAA 90 bp | GCCACAAGAGGTGAATGGGCCAGGCCAGCTCAGGCATCAGGCTGCTaGCTCCCTCCTGGGTATAGCCGGGCCTCAGCTGTGGCAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ATRGEWARPAQASGC*LPPGYSRASAVAAF Trigger: AAAGGCTGCCACAGCTGAGGCCCGGCTATACCCAGGAGGGAGCAAGCAGCCTGATGCCTGAGCTGGCCTGGCCCATTCACCTCTTGTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS CAA 72 bp | CCATGGCAGTCCCTCCCACTCCGCAGTCTGCTTTTGTaGCCAGCTCTGTCTGGGGCAAGTGTGGGTTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PWQSLPLRSLLL*PALSGASVGWR Trigger: CCGCCAACCCACACTTGCCCCAGACAGAGCTGGCAACAAAAGCAGACTGCGGAGTGGGAGGGACTGCCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS TCA 72 bp | GGCAAAGACCAGCCGGGAATATTTTCAGGGCTGCTCTaGGGGGAGCGAAGGTCTGGCCGCAGGCATTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GKDQPGIFSGLL*GERRSGRRHCL Trigger: GAGGCAATGCCTGCGGCCAGACCTTCGCTCCCCTCAGAGCAGCCCTGAAAATATTCCCGGCTGGTCTTTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 72 bp | GAAGCCTCGGGCAGGCATCGGCATTCTGAGTCGCCATaGTTCCCAGCTGCAGGAATTGCTGGGTCAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: EASGRHRHSESP*FPAAGIAGSGV Trigger: CACACCTGACCCAGCAATTCCTGCAGCTGGGAAGCATGGCGACTCAGAATGCCGATGCCTGCCCGAGGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS CCA 72 bp | GCTTGCTCCCTCCTGGGTATAGCCGGGCCTCAGCTGTaGCAGCCTTTCACACCCTTCAAAGCCTGCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: ACSLLGIAGPQL*QPFTPFKACHH Trigger: GTGATGGCAGGCTTTGAAGGGTGTGAAAGGCTGCCACAGCTGAGGCCCGGCTATACCCAGGAGGGAGCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000552628.1 |
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| CDS GCA 72 bp | GGAGAGGCAAAGACCAGCCGGGAATATTTTCAGGGCTaGTCTGAGGGGAGCGAAGGTCTGGCCGCAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: GEAKTSREYFQG*SEGSEGLAAGI Trigger: AATGCCTGCGGCCAGACCTTCGCTCCCCTCAGAGCAGCCCTGAAAATATTCCCGGCTGGTCTTTGCCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CCA 72 bp | AATATTTTCAGGGCTGCTCTGAGGGGAGCGAAGGTCTaGCCGCAGGCATTGCCTCTCTCCTCCTTCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: NIFRAALRGAKV*PQALPLSSFQA Trigger: GGCCTGGAAGGAGGAGAGAGGCAATGCCTGCGGCCAGACCTTCGCTCCCCTCAGAGCAGCCCTGAAAATATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CAA 72 bp | GACACGTTGGGGCCGAGGCCGGTGAGAAGAATGCATTaGACCCCGCGTAGGCACCATCAGCTCAAGAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: DTLGPRPVRRMH*TPRRHHQLKRV Trigger: AACCCTCTTGAGCTGATGGTGCCTACGCGGGGTCAAATGCATTCTTCTCACCGGCCTCGGCCCCAACGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CCA 72 bp | GTAAGAAGGTTCTCAGGTTGGGCCACAAGAGGTGAATaGGCCAGGCCAGCTCAGGCATCAGGCTGCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VRRFSGWATRGE*ARPAQASGCLL Trigger: GAGCAAGCAGCCTGATGCCTGAGCTGGCCTGGCCCATTCACCTCTTGTGGCCCAACCTGAGAACCTTCTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CCA 72 bp | GGTGTGGGACTCCTTAGCTCATTAGCATGCAGACAGTaGCTGAACCCTGGAGTCAGTGAGCACCCCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: GVGLLSSLACRQ*LNPGVSEHPHC Trigger: GCAGTGGGGGTGCTCACTGACTCCAGGGTTCAGCCACTGTCTGCATGCTAATGAGCTAAGGAGTCCCACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CAA 72 bp | CACATTCCAAAACTCTCAGCCGCATCAGCTCACTCCTaGGTAGGCCTGGCACAGGCCCTGGGTTCTGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: HIPKLSAASAHS*VGLAQALGSVA Trigger: GGCAACAGAACCCAGGGCCTGTGCCAGGCCTACCAAGGAGTGAGCTGATGCGGCTGAGAGTTTTGGAATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550636.1 ENST00000551922.5 |
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| CDS CAA 90 bp | AGGTTACATGACACGTTGGGGCCGAGGCCGGTGAGAAGAATGCATTaGACCCCGCGTAGGCACCATCAGCTCAAGAGGGTTTCAGCGACA | + |
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Preference number: 6 (lower is better) Translates to: RLHDTLGPRPVRRMH*TPRRHHQLKRVSAT Trigger: TGTCGCTGAAACCCTCTTGAGCTGATGGTGCCTACGCGGGGTCAAATGCATTCTTCTCACCGGCCTCGGCCCCAACGTGTCATGTAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS TCA 72 bp | CACAGTAAGAAGGTTCTCAGGTTGGGCCACAAGAGGTaGATGGGCCAGGCCAGCTCAGGCATCAGGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: HSKKVLRLGHKR*MGQASSGIRLL Trigger: AAGCAGCCTGATGCCTGAGCTGGCCTGGCCCATTCACCTCTTGTGGCCCAACCTGAGAACCTTCTTACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS TCA 72 bp | ATTAGCATGCAGACAGTGGCTGAACCCTGGAGTCAGTaGGCACCCCCACTGCAGAGTGAGGCCAAGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ISMQTVAEPWSQ*APPLQSEAKER Trigger: TCTCTCCTTGGCCTCACTCTGCAGTGGGGGTGCTCACTGACTCCAGGGTTCAGCCACTGTCTGCATGCTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 72 bp | TCTGTAGAATTCCCCCTGCCATCTTCATCACGAGGCTaGTGTGACCGTGGAGAGGCAAAGACCAGCCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SVEFPLPSSSRG*CDRGEAKTSRE Trigger: TTCCCGGCTGGTCTTTGCCTCTCCACGGTCACAGCAGCCTCGTGATGAAGATGGCAGGGGGAATTCTACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 72 bp | TCCCCAGGGTCTCACGGGTTCTGTTGCCATCGCATGTaGCGCTATGTGCATACATTTCCGTTTCTCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: SPGSHGFCCHRM*RYVHTFPFLHQ Trigger: CTGGTGGAGAAACGGAAATGTATGCACATAGCGGCACATGCGATGGCAACAGAACCCGTGAGACCCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552628.1 |
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| CDS CAA 72 bp | CACATTCCAAAACTCTCAGCCGCATCAGCTCACTCCTaGGTAGGCCTGGCACAGGCCCTCTGCACGTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: HIPKLSAASAHS*VGLAQALCTLE Trigger: TTCTAACGTGCAGAGGGCCTGTGCCAGGCCTACCAAGGAGTGAGCTGATGCGGCTGAGAGTTTTGGAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552628.1 |
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| CDS TCA 72 bp | AGAATTCCCCCTGCCATCTTCATCACGAGGCTGCTGTaGCCGTGGAGAGGCAAAGACCAGCCGGGAATATTT | + |
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Preference number: 6 (lower is better) Translates to: RIPPAIFITRLL*PWRGKDQPGIF Trigger: AAATATTCCCGGCTGGTCTTTGCCTCTCCACGGTCACAGCAGCCTCGTGATGAAGATGGCAGGGGGAATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CAA 90 bp | GGCCCTCGAAAAGTCAGTTCTTTCCCCAGGGTCTCACGGGTTCTGTaGCCATCGCATGTGCCGCTATGTGCATACATTTCCGTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GPRKVSSFPRVSRVL*PSHVPLCAYISVSP Trigger: TGGAGAAACGGAAATGTATGCACATAGCGGCACATGCGATGGCAACAGAACCCGTGAGACCCTGGGGAAAGAACTGACTTTTCGAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552628.1 |
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| CDS GCA 72 bp | AAGTCAGTTCTTTCCCCAGGGTCTCACGGGTTCTGTTaGCATCGCATGTGCCGCTATGTGCATACATTTCCG | + |
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Preference number: 6 (lower is better) Translates to: KSVLSPGSHGFC*HRMCRYVHTFP Trigger: CGGAAATGTATGCACATAGCGGCACATGCGATGGCAACAGAACCCGTGAGACCCTGGGGAAAGAACTGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552628.1 |
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| CDS TCA 72 bp | TGGGAGAATGATACCATTATGAAAAGGGAAAGGAGCTaGGGTGCTTGGGCGGGGGTCAGGTTGAGTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: WENDTIMKRERS*GAWAGVRLSLR Trigger: CCTCAAACTCAACCTGACCCCCGCCCAAGCACCTCAGCTCCTTTCCCTTTTCATAATGGTATCATTCTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS CAA 72 bp | AAAGTCAGTTCTTTCCCCAGGGTCTCACGGGTTCTGTaGCCATCGCATGTGCCGCTATGTGCATACATTTCC | + |
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Preference number: 6 (lower is better) Translates to: KVSSFPRVSRVL*PSHVPLCAYIS Trigger: GGAAATGTATGCACATAGCGGCACATGCGATGGCAACAGAACCCGTGAGACCCTGGGGAAAGAACTGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552628.1 |
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| CDS CCA 72 bp | CCGTTTCTCCACCAGATGGAAAGTGCCTTAAAGATATaGGTTGTGTATCTCAAGCCTTCCTGCTCCATCCCT | + |
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Preference number: 6 (lower is better) Translates to: PFLHQMESALKI*VVYLKPSCSIP Trigger: AGGGATGGAGCAGGAAGGCTTGAGATACACAACCCATATCTTTAAGGCACTTTCCATCTGGTGGAGAAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000550636.1 ENST00000551922.5 ENST00000552628.1 |
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| CDS TCA 72 bp | CATTTTACAGATGTGGAAGCACAAGGCCAAAGAGGTTaGGTGACTAACACGAGGTTACATGACACGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: HFTDVEAQGQRG*VTNTRLHDTLG Trigger: CCCCAACGTGTCATGTAACCTCGTGTTAGTCACTCAACCTCTTTGGCCTTGTGCTTCCACATCTGTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS TCA 72 bp | CAGAGCCAGCCATCTAACACATGCTGTAAACATGTTTaGTCACTAGAAAATAAGACACGTGATCCAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: QSQPSNTCCKHV*SLENKTRDPGA Trigger: TGCCCCTGGATCACGTGTCTTATTTTCTAGTGATCAAACATGTTTACAGCATGTGTTAGATGGCTGGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550636.1 |
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| CDS GCA 72 bp | TGTGCATACATTTCCGTTTCTCCACCAGATGGAAAGTaGCTTAAAGATATGGGTTGTGTATCTCAAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CAYISVSPPDGK*LKDMGCVSQAF Trigger: GAAGGCTTGAGATACACAACCCATATCTTTAAGGCACTTTCCATCTGGTGGAGAAACGGAAATGTATGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000550636.1 ENST00000551922.5 ENST00000552628.1 |
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| CDS GCA 72 bp | CTCTGTAAAATTTCCGTTTCTCCACCAGATGGAAAGTaGCTTAAAGATATGGGTTGTGTATCTCAAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LCKISVSPPDGK*LKDMGCVSQAF Trigger: GAAGGCTTGAGATACACAACCCATATCTTTAAGGCACTTTCCATCTGGTGGAGAAACGGAAATTTTACAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546911.5 |
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