RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02394 (Homo sapiens)

Ensembl gene IDs: ENSG00000258332

Ensembl transcript IDs: ENST00000549140.2, ENST00000647598.1

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GGGCCAGTCACCCCAGCCAACACTGTAACACTCTTCTTAGCCTGTTaGCTTAAAGGTAGGAGGAGCCCAAAGTGTCCAGATGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: GPVTPANTVTLFLAC*LKGRRSPKCPDGNL
Trigger: AAGATTGCCATCTGGACACTTTGGGCTCCTCCTACCTTTAAGTCAACAGGCTAAGAAGAGTGTTACAGTGTTGGCTGGGGTGACTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS CCA 90 bp GTGCCGCTTCCACTTCCACCCCTCGATTACTGGACCTGTAAATCCTaGCTATGGGAGAAACAGTATCATGTATTGGAGGCTGATTCAGAG +
Preference number: 5 (lower is better)
Translates to: VPLPLPPLDYWTCKS*LWEKQYHVLEADSE
Trigger: CTCTGAATCAGCCTCCAATACATGATACTGTTTCTCCCATAGCCAGGATTTACAGGTCCAGTAATCGAGGGGTGGAAGTGGAAGCGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS TCA 90 bp TCAACAAATCAAGTGGTGCCTTATTGCTCAGTGAACATTAATAAGTaGGGTGGGGATTGGTGGACAAAGGAGCGGGAATCATTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: STNQVVPYCSVNINK*GGDWWTKERESFSW
Trigger: CCAACTGAATGATTCCCGCTCCTTTGTCCACCAATCCCCACCTCACTTATTAATGTTCACTGAGCAATAAGGCACCACTTGATTTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647598.1
CDS CCA 90 bp TACCACATTTTCTTTATCCACTCATTGGTTGATGGGCACTCAGGTTaGTTTCATATTTTGACAGTTGCTAATTGTGCTGCTGTAAACATT +
Preference number: 5 (lower is better)
Translates to: YHIFFIHSLVDGHSG*FHILTVANCAAVNI
Trigger: AATGTTTACAGCAGCACAATTAGCAACTGTCAAAATATGAAACCAACCTGAGTGCCCATCAACCAATGAGTGGATAAAGAAAATGTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647598.1
CDS GCA 72 bp GCTGATTCAGAGCATACACAGCCCTCTGGAGAACTTTaGCCCAGCCCTGCAGAGTATTGTCACCTAGTTGGC +
Preference number: 6 (lower is better)
Translates to: ADSEHTQPSGEL*PSPAEYCHLVG
Trigger: GCCAACTAGGTGACAATACTCTGCAGGGCTGGGGCAAAGTTCTCCAGAGGGCTGTGTATGCTCTGAATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS CCA 72 bp CCACTTCCACCCCTCGATTACTGGACCTGTAAATCCTaGCTATGGGAGAAACAGTATCATGTATTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: PLPPLDYWTCKS*LWEKQYHVLEA
Trigger: AGCCTCCAATACATGATACTGTTTCTCCCATAGCCAGGATTTACAGGTCCAGTAATCGAGGGGTGGAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS CAA 90 bp TACTGGACCTGTAAATCCTGGCTATGGGAGAAACAGTATCATGTATaGGAGGCTGATTCAGAGCATACACAGCCCTCTGGAGAACTTTGC +
Preference number: 6 (lower is better)
Translates to: YWTCKSWLWEKQYHV*EADSEHTQPSGELC
Trigger: GCAAAGTTCTCCAGAGGGCTGTGTATGCTCTGAATCAGCCTCCAATACATGATACTGTTTCTCCCATAGCCAGGATTTACAGGTCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS CAA 90 bp GCCCAAAGTGTCCAGATGGCAATCTTAACTTCTAGTTTTATGGCATaGTTGTTGTGTCTCCTGGTGGCAGCACTCCTCCTTCTGGAACTA +
Preference number: 6 (lower is better)
Translates to: AQSVQMAILTSSFMA*LLCLLVAALLLLEL
Trigger: TAGTTCCAGAAGGAGGAGTGCTGCCACCAGGAGACACAACAACAATGCCATAAAACTAGAAGTTAAGATTGCCATCTGGACACTTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS TCA 72 bp CTGGCTATGGGAGAAACAGTATCATGTATTGGAGGCTaGTTCAGAGCATACACAGCCCTCTGGAGAACTTTG +
Preference number: 6 (lower is better)
Translates to: LAMGETVSCIGG*FRAYTALWRTL
Trigger: CAAAGTTCTCCAGAGGGCTGTGTATGCTCTGAATCAGCCTCCAATACATGATACTGTTTCTCCCATAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS CCA 72 bp CCACCCCTCGATTACTGGACCTGTAAATCCTGGCTATaGGAGAAACAGTATCATGTATTGGAGGCTGATTCA +
Preference number: 6 (lower is better)
Translates to: PPLDYWTCKSWL*EKQYHVLEADS
Trigger: TGAATCAGCCTCCAATACATGATACTGTTTCTCCCATAGCCAGGATTTACAGGTCCAGTAATCGAGGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS TCA 72 bp CTTATCATTCAGCAACTCCATTGTGGAGTAGTAGACTaGTTTCATCTTGATAGTCTGGGCCAGTCACCCCAG +
Preference number: 6 (lower is better)
Translates to: LIIQQLHCGVVD*FHLDSLGQSPQ
Trigger: CTGGGGTGACTGGCCCAGACTATCAAGATGAAATCAGTCTACTACTCCACAATGGAGTTGCTGAATGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS CAA 72 bp TGTAAATCCTGGCTATGGGAGAAACAGTATCATGTATaGGAGGCTGATTCAGAGCATACACAGCCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: CKSWLWEKQYHV*EADSEHTQPSG
Trigger: TCCAGAGGGCTGTGTATGCTCTGAATCAGCCTCCAATACATGATACTGTTTCTCCCATAGCCAGGATTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS CAA 72 bp GTCCAGATGGCAATCTTAACTTCTAGTTTTATGGCATaGTTGTTGTGTCTCCTGGTGGCAGCACTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: VQMAILTSSFMA*LLCLLVAALLL
Trigger: AAGGAGGAGTGCTGCCACCAGGAGACACAACAACAATGCCATAAAACTAGAAGTTAAGATTGCCATCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549140.2
CDS GCA 72 bp AGAGGGAAGAAATGTTCAGGGAGGGAAAGACAATCCTaGCCAGCTGTTGTAGTAAGAACATTGAATATTAAA +
Preference number: 6 (lower is better)
Translates to: RGKKCSGRERQS*PAVVVRTLNIK
Trigger: TTTAATATTCAATGTTCTTACTACAACAGCTGGGCAGGATTGTCTTTCCCTCCCTGAACATTTCTTCCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549140.2
ENST00000647598.1
CDS CCA 72 bp TTCTTTATCCACTCATTGGTTGATGGGCACTCAGGTTaGTTTCATATTTTGACAGTTGCTAATTGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: FFIHSLVDGHSG*FHILTVANCAA
Trigger: AGCAGCACAATTAGCAACTGTCAAAATATGAAACCAACCTGAGTGCCCATCAACCAATGAGTGGATAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647598.1
CDS CAA 72 bp ACTTCTTTTCCTCTAGGCAGATACCCATTAGTGGGATaGCTGATTTTCAATGTAAGTGTGAAGAATGTTCCC +
Preference number: 6 (lower is better)
Translates to: TSFPLGRYPLVG*LIFNVSVKNVP
Trigger: GGGAACATTCTTCACACTTACATTGAAAATCAGCAATCCCACTAATGGGTATCTGCCTAGAGGAAAAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647598.1
CDS CAA 72 bp TCATTGGTTGATGGGCACTCAGGTTGGTTTCATATTTaGACAGTTGCTAATTGTGCTGCTGTAAACATTTGT +
Preference number: 6 (lower is better)
Translates to: SLVDGHSGWFHI*TVANCAAVNIC
Trigger: ACAAATGTTTACAGCAGCACAATTAGCAACTGTCAAAATATGAAACCAACCTGAGTGCCCATCAACCAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647598.1
CDS CAA 90 bp CATATAATGACTTCTTTTCCTCTAGGCAGATACCCATTAGTGGGATaGCTGATTTTCAATGTAAGTGTGAAGAATGTTCCCTCTCCTTAT +
Preference number: 6 (lower is better)
Translates to: HIMTSFPLGRYPLVG*LIFNVSVKNVPSPY
Trigger: ATAAGGAGAGGGAACATTCTTCACACTTACATTGAAAATCAGCAATCCCACTAATGGGTATCTGCCTAGAGGAAAAGAAGTCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647598.1
CDS TCA 72 bp TGCAAACTTATTTCATTCAACTTCTCTATTCAGAGATaGTGTCACAAGGCCATTTCAGAAGTGTCATATCGC +
Preference number: 6 (lower is better)
Translates to: CKLISFNFSIQR*CHKAISEVSYR
Trigger: GCGATATGACACTTCTGAAATGGCCTTGTGACATCATCTCTGAATAGAGAAGTTGAATGAAATAAGTTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549140.2
ENST00000647598.1
CDS GCA 72 bp TGCTTATCATTCAGCAACTTACTTAGAATAATGGTCTaGAACTCCATCCAGGTTTCTGTGAATGCCATTATT +
Preference number: 6 (lower is better)
Translates to: CLSFSNLLRIMV*NSIQVSVNAII
Trigger: AATAATGGCATTCACAGAAACCTGGATGGAGTTGCAGACCATTATTCTAAGTAAGTTGCTGAATGATAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647598.1