Pregenerated sensors for LINC02393 (Homo sapiens)
Ensembl gene IDs: ENSG00000256597Ensembl transcript IDs: ENST00000536342.1, ENST00000614177.2, ENST00000662498.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CACATGGATGGAGAGTGGGCAAGAGAGACATTCCCAAAGGGAATTTaGGTGCCAGTAGCAGAAGGAACAACCTTTCCAGGGCAGGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: HMDGEWARETFPKGI*VPVAEGTTFPGQAE Trigger: TTCTGCCTGCCCTGGAAAGGTTGTTCCTTCTGCTACTGGCACCCAAATTCCCTTTGGGAATGTCTCTCTTGCCCACTCTCCATCCATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS TCA 90 bp | TCTGTCTTTTCCCTCGCCCTGATCTTGAAACTTCTGCACGGCCACTaGATTTGCATGTGTGCATCACCTGGTCTCCATGGCAATGGAACC | + |
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Preference number: 5 (lower is better) Translates to: SVFSLALILKLLHGH*ICMCASPGLHGNGT Trigger: GGTTCCATTGCCATGGAGACCAGGTGATGCACACATGCAAATTCAGTGGCCGTGCAGAAGTTTCAAGATCAGGGCGAGGGAAAAGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614177.2 |
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| CDS GCA 90 bp | CGCCCTGATCTTGAAACTTCTGCACGGCCACTGAATTTGCATGTGTaGATCACCTGGTCTCCATGGCAACCTATAGAACTTCCAAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: RPDLETSARPLNLHV*ITWSPWQPIELPRQ Trigger: TTGCCTTGGAAGTTCTATAGGTTGCCATGGAGACCAGGTGATGCACACATGCAAATTCAGTGGCCGTGCAGAAGTTTCAAGATCAGGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662498.1 |
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| CDS CCA 90 bp | CTTCCGTGCTCAGTGGTAAAGGCTGACAGATCAGATCAAGGATCCTaGGAGGGAGCCTATAGAACTTCCAAGGCAATGTTGGGCTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LPCSVVKADRSDQGS*EGAYRTSKAMLGLF Trigger: AAACAAGCCCAACATTGCCTTGGAAGTTCTATAGGCTCCCTCCCAGGATCCTTGATCTGATCTGTCAGCCTTTACCACTGAGCACGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614177.2 |
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| CDS GCA 90 bp | GTATCTGTCTCTCTTTTGTTGTGGTGTCAAAGTCTGTTTAGGTTATaGGGTGCCCATATCCCCTGTTATCAGCACCCTCTCATGCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: VSVSLLLWCQSLFRL*GAHIPCYQHPLMLS Trigger: ACTGAGCATGAGAGGGTGCTGATAACAGGGGATATGGGCACCGCATAACCTAAACAGACTTTGACACCACAACAAAAGAGAGACAGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536342.1 |
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| CDS GCA 90 bp | TCTGAGGGCAAACTCCAAAGTTTGATGAATATGATGTTCAGCCCCTaGAGAACCTTGCTTGTTAGTGTTGCCTCTGCAGTGTCATTTACT | + |
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Preference number: 5 (lower is better) Translates to: SEGKLQSLMNMMFSP*RTLLVSVASAVSFT Trigger: AGTAAATGACACTGCAGAGGCAACACTAACAAGCAAGGTTCTGCAGGGGCTGAACATCATATTCATCAAACTTTGGAGTTTGCCCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS GCA 90 bp | ACACACACAGAGAGATCAGCTTTGAAGAAGACTGAATTCTCTCCCTaGACAAATGAAGCCTCAATTGTTCCACCCTATGCTGCAATAGCA | + |
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Preference number: 5 (lower is better) Translates to: THTERSALKKTEFSP*TNEASIVPPYAAIA Trigger: TGCTATTGCAGCATAGGGTGGAACAATTGAGGCTTCATTTGTGCAGGGAGAGAATTCAGTCTTCTTCAAAGCTGATCTCTCTGTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CCA 90 bp | TGTTCCACCCTATGCTGCAATAGCACTAACTCCTCTCAGGTAACATaGCCATACTCTTCTGTTCTCCCTGGTAAGATCAATACCAAATAT | + |
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Preference number: 5 (lower is better) Translates to: CSTLCCNSTNSSQVT*PYSSVLPGKINTKY Trigger: ATATTTGGTATTGATCTTACCAGGGAGAACAGAAGAGTATGGCCATGTTACCTGAGAGGAGTTAGTGCTATTGCAGCATAGGGTGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS GCA 90 bp | GACATATCTCTGACTGTGATGACCATCATCTCTTGTAAGGGATTTTaGAGCCAACTCTCTCATTATAGTGTCATCTTGAGTATGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: DISLTVMTIISCKGF*SQLSHYSVILSMEK Trigger: CTTCTCCATACTCAAGATGACACTATAATGAGAGAGTTGGCTGCAAAATCCCTTACAAGAGATGATGGTCATCACAGTCAGAGATATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS TCA 72 bp | TCCCTCGCCCTGATCTTGAAACTTCTGCACGGCCACTaGATTTGCATGTGTGCATCACCTGGTCTCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: SLALILKLLHGH*ICMCASPGLHG Trigger: GCCATGGAGACCAGGTGATGCACACATGCAAATTCAGTGGCCGTGCAGAAGTTTCAAGATCAGGGCGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CCA 72 bp | CTGAGCAGAGGAAGGCATTGGCCCCACCTAAACACATaGATGGAGAGTGGGCAAGAGAGACATTCCCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSRGRHWPHLNT*MESGQERHSQR Trigger: CCTTTGGGAATGTCTCTCTTGCCCACTCTCCATCCATGTGTTTAGGTGGGGCCAATGCCTTCCTCTGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CCA 72 bp | GGAGAGTGGGCAAGAGAGACATTCCCAAAGGGAATTTaGGTGCCAGTAGCAGAAGGAACAACCTTTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GEWARETFPKGI*VPVAEGTTFPG Trigger: CCCTGGAAAGGTTGTTCCTTCTGCTACTGGCACCCAAATTCCCTTTGGGAATGTCTCTCTTGCCCACTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CAA 72 bp | CGCCCTGATCTTGAAACTTCTGCACGGCCACTGAATTaGCATGTGTGCATCACCTGGTCTCCATGGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: RPDLETSARPLN*HVCITWSPWQW Trigger: CCATTGCCATGGAGACCAGGTGATGCACACATGCAAATTCAGTGGCCGTGCAGAAGTTTCAAGATCAGGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614177.2 |
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| CDS CAA 72 bp | CGCCCTGATCTTGAAACTTCTGCACGGCCACTGAATTaGCATGTGTGCATCACCTGGTCTCCATGGCAACCT | + |
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Preference number: 6 (lower is better) Translates to: RPDLETSARPLN*HVCITWSPWQP Trigger: AGGTTGCCATGGAGACCAGGTGATGCACACATGCAAATTCAGTGGCCGTGCAGAAGTTTCAAGATCAGGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662498.1 |
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| CDS CAA 90 bp | ACACATGGATGGAGAGTGGGCAAGAGAGACATTCCCAAAGGGAATTaGGGTGCCAGTAGCAGAAGGAACAACCTTTCCAGGGCAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: THGWRVGKRDIPKGN*GASSRRNNLSRAGR Trigger: TCTGCCTGCCCTGGAAAGGTTGTTCCTTCTGCTACTGGCACCCAAATTCCCTTTGGGAATGTCTCTCTTGCCCACTCTCCATCCATGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CAA 90 bp | CTTTTCCCTCGCCCTGATCTTGAAACTTCTGCACGGCCACTGAATTaGCATGTGTGCATCACCTGGTCTCCATGGCAATGGAACCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: LFPRPDLETSARPLN*HVCITWSPWQWNQV Trigger: TACTTGGTTCCATTGCCATGGAGACCAGGTGATGCACACATGCAAATTCAGTGGCCGTGCAGAAGTTTCAAGATCAGGGCGAGGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614177.2 |
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| CDS GCA 72 bp | GCGGTGCCCATATCCCCTGTTATCAGCACCCTCTCATaGTCAGTTCTTCTCATCTACATACACAAGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AVPISPVISTLS*SVLLIYIHKSP Trigger: TGGACTCTTGTGTATGTAGATGAGAAGAACTGAGCATGAGAGGGTGCTGATAACAGGGGATATGGGCACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536342.1 |
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| CDS GCA 72 bp | ATATTGACACAGAAGTCGATAGATCAGGAATTCCCCTaGTCCAGGAGGGGGATCTCTGAGGGCAAACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ILTQKSIDQEFP*SRRGISEGKLQ Trigger: TTGGAGTTTGCCCTCAGAGATCCCCCTCCTGGAGCAGGGGAATTCCTGATCTATCGACTTCTGTGTCAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CAA 72 bp | TCCAGGAGGGGGATCTCTGAGGGCAAACTCCAAAGTTaGATGAATATGATGTTCAGCCCCTGCAGAACCTTG | + |
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Preference number: 6 (lower is better) Translates to: SRRGISEGKLQS*MNMMFSPCRTL Trigger: CAAGGTTCTGCAGGGGCTGAACATCATATTCATCAAACTTTGGAGTTTGCCCTCAGAGATCCCCCTCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS GCA 72 bp | CTTGAAACTTCTGCACGGCCACTGAATTTGCATGTGTaGATCACCTGGTCTCCATGGCAATGGAACCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: LETSARPLNLHV*ITWSPWQWNQV Trigger: TACTTGGTTCCATTGCCATGGAGACCAGGTGATGCACACATGCAAATTCAGTGGCCGTGCAGAAGTTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614177.2 |
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| CDS GCA 72 bp | CTGAATTTCCAAACCACATTTCCACCCAGGCTGCACTaGCTGTGCTTTGACATATCTCTGACTGTGATGACC | + |
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Preference number: 6 (lower is better) Translates to: LNFQTTFPPRLH*LCFDISLTVMT Trigger: GGTCATCACAGTCAGAGATATGTCAAAGCACAGGCAGTGCAGCCTGGGTGGAAATGTGGTTTGGAAATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CCA 72 bp | TCAGTGGTAAAGGCTGACAGATCAGATCAAGGATCCTaGGAGGGAGCCTATAGAACTTCCAAGGCAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: SVVKADRSDQGS*EGAYRTSKAML Trigger: CAACATTGCCTTGGAAGTTCTATAGGCTCCCTCCCAGGATCCTTGATCTGATCTGTCAGCCTTTACCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614177.2 |
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| CDS TCA 72 bp | TGGAAAGGAGTACATTGGCTTCAGAAATGGCTTCGTTaGGGTACTCAAGGGGCCTCATCAGGATTTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: WKGVHWLQKWLR*GTQGASSGFCS Trigger: GGAACAAAATCCTGATGAGGCCCCTTGAGTACCTCAACGAAGCCATTTCTGAAGCCAATGTACTCCTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS GCA 72 bp | TCTCTTTTGTTGTGGTGTCAAAGTCTGTTTAGGTTATaGGGTGCCCATATCCCCTGTTATCAGCACCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLLLWCQSLFRL*GAHIPCYQHPL Trigger: GAGAGGGTGCTGATAACAGGGGATATGGGCACCGCATAACCTAAACAGACTTTGACACCACAACAAAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536342.1 |
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| CDS CAA 72 bp | GCTTCGTTGAGGTACTCAAGGGGCCTCATCAGGATTTaGTTCCCCAAAGTCTTTATCCCACAGACATTTATG | + |
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Preference number: 6 (lower is better) Translates to: ASLRYSRGLIRI*FPKVFIPQTFM Trigger: CATAAATGTCTGTGGGATAAAGACTTTGGGGAACAAAATCCTGATGAGGCCCCTTGAGTACCTCAACGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CCA 72 bp | CTATGCTGCAATAGCACTAACTCCTCTCAGGTAACATaGCCATACTCTTCTGTTCTCCCTGGTAAGATCAAT | + |
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Preference number: 6 (lower is better) Translates to: LCCNSTNSSQVT*PYSSVLPGKIN Trigger: ATTGATCTTACCAGGGAGAACAGAAGAGTATGGCCATGTTACCTGAGAGGAGTTAGTGCTATTGCAGCATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CAA 72 bp | TTCATTGTGGCCAAACAACGCATTTGGAAGCTTCTGTaGTACGTGGGATTCAAATCTAGCCACGAAAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: FIVAKQRIWKLL*YVGFKSSHERV Trigger: GACTCTTTCGTGGCTAGATTTGAATCCCACGTACAACAGAAGCTTCCAAATGCGTTGTTTGGCCACAATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536342.1 |
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| CDS CAA 72 bp | AGTTTGATGAATATGATGTTCAGCCCCTGCAGAACCTaGCTTGTTAGTGTTGCCTCTGCAGTGTCATTTACT | + |
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Preference number: 6 (lower is better) Translates to: SLMNMMFSPCRT*LVSVASAVSFT Trigger: AGTAAATGACACTGCAGAGGCAACACTAACAAGCAAGGTTCTGCAGGGGCTGAACATCATATTCATCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS GCA 72 bp | CTGACTGTGATGACCATCATCTCTTGTAAGGGATTTTaGAGCCAACTCTCTCATTATAGTGTCATCTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LTVMTIISCKGF*SQLSHYSVILS Trigger: ACTCAAGATGACACTATAATGAGAGAGTTGGCTGCAAAATCCCTTACAAGAGATGATGGTCATCACAGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CCA 72 bp | TGTCATTGTTCTACAGTATCTGTCTCTCTTTTGTTGTaGTGTCAAAGTCTGTTTAGGTTATGCGGTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: CHCSTVSVSLLL*CQSLFRLCGAH Trigger: ATGGGCACCGCATAACCTAAACAGACTTTGACACCACAACAAAAGAGAGACAGATACTGTAGAACAATGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536342.1 |
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| CDS CCA 72 bp | CACACACCCACACAAGAATATGTTAACTGTCATAACTaGAAAGGAGTACATTGGCTTCAGAAATGGCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: HTPTQEYVNCHN*KGVHWLQKWLR Trigger: ACGAAGCCATTTCTGAAGCCAATGTACTCCTTTCCAGTTATGACAGTTAACATATTCTTGTGTGGGTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000614177.2 ENST00000662498.1 |
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| CDS CCA 72 bp | CCATTCAAGGGATATTTCAATAAGGATTCTTCATTGTaGCCAAACAACGCATTTGGAAGCTTCTGTTGTACG | + |
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Preference number: 6 (lower is better) Translates to: PFKGYFNKDSSL*PNNAFGSFCCT Trigger: CGTACAACAGAAGCTTCCAAATGCGTTGTTTGGCCACAATGAAGAATCCTTATTGAAATATCCCTTGAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536342.1 |
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