Pregenerated sensors for LINC02392 (Homo sapiens)
Ensembl gene IDs: ENSG00000258183Ensembl transcript IDs: ENST00000549313.1, ENST00000549470.5, ENST00000658748.1, ENST00000658788.1, ENST00000670390.1
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAAACTTCTGGGCTCACAGGCTCAAGCAATCCTACTTCAGCCTCCTaGGAAGCTGAGACTACAGGTGTGCACCACTGCATCCGGCTAATT | + |
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Preference number: 5 (lower is better) Translates to: QTSGLTGSSNPTSAS*EAETTGVHHCIRLI Trigger: AATTAGCCGGATGCAGTGGTGCACACCTGTAGTCTCAGCTTCTCAGGAGGCTGAAGTAGGATTGCTTGAGCCTGTGAGCCCAGAAGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658788.1 ENST00000670390.1 |
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| CDS TCA 72 bp | GGGCTCACAGGCTCAAGCAATCCTACTTCAGCCTCCTaGGAAGCTGAGACTACAGGTGTGCACCACTGCATC | + |
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Preference number: 6 (lower is better) Translates to: GLTGSSNPTSAS*EAETTGVHHCI Trigger: GATGCAGTGGTGCACACCTGTAGTCTCAGCTTCTCAGGAGGCTGAAGTAGGATTGCTTGAGCCTGTGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658788.1 ENST00000670390.1 |
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| CDS CCA 72 bp | GAGGCACTGTGCCCAGCCAAGCTTGGTATTCTCACATaGAGAGTTGAACCCAGGCTGCCTGGGTCAGATGTA | + |
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Preference number: 6 (lower is better) Translates to: EALCPAKLGILT*RVEPRLPGSDV Trigger: TACATCTGACCCAGGCAGCCTGGGTTCAACTCTCCATGTGAGAATACCAAGCTTGGCTGGGCACAGTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000549470.5 ENST00000658788.1 ENST00000670390.1 |
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| CDS TCA 72 bp | CTTATCTGCATCTGTAGTTTCAGCTGCTTGGGAGACTaGGGCCGGAGAATCGCTCGAACCCAGGAAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LICICSFSCLGD*GRRIARTQEAE Trigger: CTCTGCTTCCTGGGTTCGAGCGATTCTCCGGCCTCAGTCTCCCAAGCAGCTGAAACTACAGATGCAGATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549313.1 |
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| CDS CCA 72 bp | ATAGGCTCTCACTCTGCCATTCAGGCTCTAATGCAGTaGTGTGATCGTAACTCACTGCCGTCTCAAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: IGSHSAIQALMQ*CDRNSLPSQTS Trigger: AGAAGTTTGAGACGGCAGTGAGTTACGATCACACCACTGCATTAGAGCCTGAATGGCAGAGTGAGAGCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658788.1 ENST00000670390.1 |
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| CDS TCA 72 bp | ATGCTTGACATAATGGATACCCCATTTACCCTGATGTaGTTATGCATTGTGTGCCTGTTTCAAAATATCTCA | + |
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Preference number: 6 (lower is better) Translates to: MLDIMDTPFTLM*LCIVCLFQNIS Trigger: TGAGATATTTTGAAACAGGCACACAATGCATAATCACATCAGGGTAAATGGGGTATCCATTATGTCAAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658748.1 |
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