Pregenerated sensors for LINC02390 (Homo sapiens)
Ensembl gene IDs: ENSG00000256582Ensembl transcript IDs: ENST00000541404.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CAA 72 bp | GATAGGGAGGTTGGGATAGACCTGGAGGAGCAGGGCTaGAGGGAGCTGGCTCCCCTGTTGGGGGTGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DREVGIDLEEQG*RELAPLLGVPL Trigger: CAGAGGCACCCCCAACAGGGGAGCCAGCTCCCTCAAGCCCTGCTCCTCCAGGTCTATCCCAACCTCCCTATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541404.1 |
||
| CDS CAA 90 bp | CTGAAGCTGGATAGGGAGGTTGGGATAGACCTGGAGGAGCAGGGCTaGAGGGAGCTGGCTCCCCTGTTGGGGGTGCCTCTGGGACTCATA | + |
|
Preference number: 6 (lower is better) Translates to: LKLDREVGIDLEEQG*RELAPLLGVPLGLI Trigger: TATGAGTCCCAGAGGCACCCCCAACAGGGGAGCCAGCTCCCTCAAGCCCTGCTCCTCCAGGTCTATCCCAACCTCCCTATCCAGCTTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541404.1 |
||
| CDS CAA 72 bp | GGTGCCTCTGGGACTCATATCTTTAATTCTCTAGGCTaGCCCCTTGCAGCCTTCCCTAAGATGGCAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GASGTHIFNSLG*PLAAFPKMANR Trigger: CCTGTTTGCCATCTTAGGGAAGGCTGCAAGGGGCAAGCCTAGAGAATTAAAGATATGAGTCCCAGAGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541404.1 |
||
| CDS TCA 72 bp | AATCATAATTTGGCCAACCCTTTGTGCGTAGGGCTATaGGGTGTTTTTCCTCCAGATTCTGAGGGTCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: NHNLANPLCVGL*GVFPPDSEGQS Trigger: GCTTTGACCCTCAGAATCTGGAGGAAAAACACCTCATAGCCCTACGCACAAAGGGTTGGCCAAATTATGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541404.1 |
||
| CDS CCA 72 bp | GATTGCCTTGCAAGATATAGAAAGCCTGCATATATGTaGCCTCAGACCATCTGTCCTCATGTCTGCAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: DCLARYRKPAYM*PQTICPHVCRK Trigger: TTTTCTGCAGACATGAGGACAGATGGTCTGAGGCCACATATATGCAGGCTTTCTATATCTTGCAAGGCAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541404.1 |
||