Pregenerated sensors for LINC02388 (Homo sapiens)
Ensembl gene IDs: ENSG00000257259Ensembl transcript IDs: ENST00000550678.1, ENST00000552201.1, ENST00000648243.1, ENST00000654861.1, ENST00000668012.1, ENST00000670826.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCACAAGGACCCTGGACCTGGCCCATGAAACCACTTTTTCCTCCTaGGCCTCTGGGCCTATGGTGGGAGGGGCTGCCATGAAGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: STRTLDLAHETTFSS*ASGPMVGGAAMKVS Trigger: AGAGACCTTCATGGCAGCCCCTCCCACCATAGGCCCAGAGGCCCAGGAGGAAAAAGTGGTTTCATGGGCCAGGTCCAGGGTCCTTGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 90 bp | GGGCACCAAGTCCTAAGGCTGCACACAGCACAAGGACCCTGGACCTaGCCCATGAAACCACTTTTTCCTCCTGGGCCTCTGGGCCTATGG | + |
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Preference number: 5 (lower is better) Translates to: GHQVLRLHTAQGPWT*PMKPLFPPGPLGLW Trigger: CCATAGGCCCAGAGGCCCAGGAGGAAAAAGTGGTTTCATGGGCCAGGTCCAGGGTCCTTGTGCTGTGTGCAGCCTTAGGACTTGGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 90 bp | GACACAGGGCACCAAGTCCTAAGGCTGCACACAGCACAAGGACCCTaGACCTGGCCCATGAAACCACTTTTTCCTCCTGGGCCTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: DTGHQVLRLHTAQGP*TWPMKPLFPPGPLG Trigger: GCCCAGAGGCCCAGGAGGAAAAAGTGGTTTCATGGGCCAGGTCCAGGGTCCTTGTGCTGTGTGCAGCCTTAGGACTTGGTGCCCTGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 90 bp | CTGAAGCCATGGCCTGAGCTCTACATTGGCCCCTTCAGCCACGGCTaGAATGGCTGGGACACAGGGCACCAAGTCCTAAGGCTGCACACA | + |
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Preference number: 5 (lower is better) Translates to: LKPWPELYIGPFSHG*NGWDTGHQVLRLHT Trigger: TGTGTGCAGCCTTAGGACTTGGTGCCCTGTGTCCCAGCCATTCCAGCCGTGGCTGAAGGGGCCAATGTAGAGCTCAGGCCATGGCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 90 bp | CACGTGGAAGCTGTCAAGGTTTGGGGCTTCCACCCTCTGAAGCCATaGCCTGAGCTCTACATTGGCCCCTTCAGCCACGGCTGGAATGGC | + |
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Preference number: 5 (lower is better) Translates to: HVEAVKVWGFHPLKP*PELYIGPFSHGWNG Trigger: GCCATTCCAGCCGTGGCTGAAGGGGCCAATGTAGAGCTCAGGCCATGGCTTCAGAGGGTGGAAGCCCCAAACCTTGACAGCTTCCACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS GCA 90 bp | ATCACACTGATGCAAGAGATGGGTTCCCATGGTCTTGGGCAGCTCTaGCCCTATGGCTTTGTAGGATTCAGCCCTCACCCAGCTGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: ITLMQEMGSHGLGQL*PYGFVGFSPHPAAF Trigger: GAAAGCAGCTGGGTGAGGGCTGAATCCTACAAAGCCATAGGGGCAGAGCTGCCCAAGACCATGGGAACCCATCTCTTGCATCAGTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS GCA 90 bp | ATTCAGCCCTCACCCAGCTGCTTTCACAGGCTGGCATTGAGTGTCTaGAGCTTTTCCAGCAACACAGTGCAAGCTGTCAGTGGATCTACC | + |
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Preference number: 5 (lower is better) Translates to: IQPSPSCFHRLALSV*SFSSNTVQAVSGST Trigger: GGTAGATCCACTGACAGCTTGCACTGTGTTGCTGGAAAAGCTGCAGACACTCAATGCCAGCCTGTGAAAGCAGCTGGGTGAGGGCTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 90 bp | GTGCAAGCTGTCAGTGGATCTACCATTCTGGGGTCTGAAAGATGGTaGCCCTCTTCTCATAGCTGCACTAGGCAGTGCCCACTAGGAACT | + |
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Preference number: 5 (lower is better) Translates to: VQAVSGSTILGSERW*PSSHSCTRQCPLGT Trigger: AGTTCCTAGTGGGCACTGCCTAGTGCAGCTATGAGAAGAGGGCCACCATCTTTCAGACCCCAGAATGGTAGATCCACTGACAGCTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS TCA 90 bp | TTTGTAGGATTCAGCCCTCACCCAGCTGCTTTCACAGGCTGGCATTaGGTGTCTGCAGCTTTTCCAGCAACACAGTGCAAGCTGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: FVGFSPHPAAFTGWH*VSAAFPATQCKLSV Trigger: CACTGACAGCTTGCACTGTGTTGCTGGAAAAGCTGCAGACACTCAATGCCAGCCTGTGAAAGCAGCTGGGTGAGGGCTGAATCCTACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 90 bp | GGCAATGAAGGCAGGATCAGGTTGTTACTGCTTTTGGGGGATCCTTaGTACCTGGCACAACTGTCTAGCAGAGGTGCCACATACGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: GNEGRIRLLLLLGDP*YLAQLSSRGATYVP Trigger: TGGAACGTATGTGGCACCTCTGCTAGACAGTTGTGCCAGGTACCAAGGATCCCCCAAAAGCAGTAACAACCTGATCCTGCCTTCATTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS GCA 90 bp | GCTAATCCTGAGAGACTTGATTCCCAACACGTTCAGGATGAGTTATaGGAGATTCCAGTGGGTCTAGCGTCATCAGGTGTGCTCACATGC | + |
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Preference number: 5 (lower is better) Translates to: ANPERLDSQHVQDEL*EIPVGLASSGVLTC Trigger: GCATGTGAGCACACCTGATGACGCTAGACCCACTGGAATCTCGCATAACTCATCCTGAACGTGTTGGGAATCAAGTCTCTCAGGATTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000550678.1 ENST00000648243.1 ENST00000654861.1 |
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| CDS TCA 90 bp | CACGTCCTCCCAGCAAGCAGGGGAGCTGTCTTGTCATGGGATCTTTaGCACTTAATACGAAGCCTGAAACATAAGGTATGTAGCAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: HVLPASRGAVLSWDL*HLIRSLKHKVCSKG Trigger: TCCCTTGCTACATACCTTATGTTTCAGGCTTCGTATTAAGTGTCAAAGATCCCATGACAAGACAGCTCCCCTGCTTGCTGGGAGGACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670826.1 |
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| CDS CCA 90 bp | AAGGCAGGATCAGGTTGTTACTGCTTTTGGGGGATCCTTGGTACCTaGCACAACTGTCTAGCAGAGGTGCCACATACGTTCCATATGTTA | + |
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Preference number: 5 (lower is better) Translates to: KAGSGCYCFWGILGT*HNCLAEVPHTFHML Trigger: TAACATATGGAACGTATGTGGCACCTCTGCTAGACAGTTGTGCCAGGTACCAAGGATCCCCCAAAAGCAGTAACAACCTGATCCTGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS TCA 90 bp | GTTCAGGGAACTCCATGGTCTGCAGATGTGGACTTAGGTTTCTCTTaGCTGTGTCAGCTGGAGCAAGCAGGTAGAGTATCAGGCATTTAT | + |
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Preference number: 5 (lower is better) Translates to: VQGTPWSADVDLGFS*LCQLEQAGRVSGIY Trigger: ATAAATGCCTGATACTCTACCTGCTTGCTCCAGCTGACACAGTCAAGAGAAACCTAAGTCCACATCTGCAGACCATGGAGTTCCCTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS TCA 90 bp | CAACTGTCTAGCAGAGGTGCCACATACGTTCCATATGTTAATGAATaGATGTGTTTCTGTGGTTGTCAGCACACTGGCAAGCCTCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: QLSSRGATYVPYVNE*MCFCGCQHTGKPQG Trigger: TCCCTGAGGCTTGCCAGTGTGCTGACAACCACAGAAACACATTCATTCATTAACATATGGAACGTATGTGGCACCTCTGCTAGACAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS TCA 90 bp | GCTCTTTCGTTAAATCTGTTTCCCATGGGTGGATGTAAGTGGCAATaGAGGCAGGATCAGGTTGTTACTGCTTTTGGGGGATCCTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: ALSLNLFPMGGCKWQ*RQDQVVTAFGGSLV Trigger: TACCAAGGATCCCCCAAAAGCAGTAACAACCTGATCCTGCCTTCATTGCCACTTACATCCACCCATGGGAAACAGATTTAACGAAAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS TCA 90 bp | TGTGTGGCATTTCCTCCTAAATCCCACAAGCAAAGTGGGCACCTGTaGAAAGAGCAACAAAGAGACCTAACCATGGTTGTCCTGAAATGG | + |
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Preference number: 5 (lower is better) Translates to: CVAFPPKSHKQSGHL*KEQQRDLTMVVLKW Trigger: CCATTTCAGGACAACCATGGTTAGGTCTCTTTGTTGCTCTTTTCACAGGTGCCCACTTTGCTTGTGGGATTTAGGAGGAAATGCCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654861.1 |
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| CDS GCA 90 bp | GCCACAGATTCTGATTCATTTGATCTTGGATGGAATCTAGTCGTTTaGAACTCTGCCAGACACACCAGAGGTTTCAGATGTACCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: ATDSDSFDLGWNLVV*NSARHTRGFRCTLS Trigger: GGACAGGGTACATCTGAAACCTCTGGTGTGTCTGGCAGAGTTGCAAACGACTAGATTCCATCCAAGATCAAATGAATCAGAATCTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670826.1 |
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| CDS TCA 90 bp | ATGCCACCGCACTCCAGCCTTTTCTGGACTACTCTTTGGCTAGTCTaGAAGTTGGGATTCCAAGCATTTAAGAGGTTTTTGTTCAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: MPPHSSLFWTTLWLV*KLGFQAFKRFLFRE Trigger: TTCCCTGAACAAAAACCTCTTAAATGCTTGGAATCCCAACTTTCAGACTAGCCAAAGAGTAGTCCAGAAAAGGCTGGAGTGCGGTGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS TCA 90 bp | CCAAAACAATGCCAAATTTATTGCTGGCCTGGCAAGGAAAAGTTCTaGCAGTCAGCTACAAGGTCAGTGGGTCTCTCCAAGCAGAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: PKQCQIYCWPGKEKF*QSATRSVGLSKQKL Trigger: TAACTTCTGCTTGGAGAGACCCACTGACCTTGTAGCTGACTGTCAGAACTTTTCCTTGCCAGGCCAGCAATAAATTTGGCATTGTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000550678.1 ENST00000648243.1 ENST00000654861.1 |
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| CDS GCA 90 bp | GATTCCAAGCATTTAAGAGGTTTTTGTTCAGGGAACTCCATGGTCTaGAGATGTGGACTTAGGTTTCTCTTGACTGTGTCAGCTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: DSKHLRGFCSGNSMV*RCGLRFLLTVSAGA Trigger: TGCTCCAGCTGACACAGTCAAGAGAAACCTAAGTCCACATCTGCAGACCATGGAGTTCCCTGAACAAAAACCTCTTAAATGCTTGGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS GCA 90 bp | ACCACAGATTCTGATTCATTTGATCTTGGATGGAATCTAGTCGTTTaGAACTCTGCCAGACACACCAGAGGTTTCAGATGTACCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: TTDSDSFDLGWNLVV*NSARHTRGFRCTLS Trigger: GGACAGGGTACATCTGAAACCTCTGGTGTGTCTGGCAGAGTTGCAAACGACTAGATTCCATCCAAGATCAAATGAATCAGAATCTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552201.1 |
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| CDS GCA 90 bp | GTCTTGAGGATTAACATTGGGCTCCTTGCTACTCAAGCAAATTTCTaGAGCTGGCTTGAATTTCTCAGGTATGTAGCAAGGGACAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VLRINIGLLATQANF*SWLEFLRYVARDSR Trigger: TCTGCTGTCCCTTGCTACATACCTGAGAAATTCAAGCCAGCTGCAGAAATTTGCTTGAGTAGCAAGGAGCCCAATGTTAATCCTCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS TCA 90 bp | TCTCTGGGCTTCCATAGTATCATGTACTTCCCACATCAGAGCACATaGATTCCAATTGCTCTTTCGTTAAATCTGTTTCCCATGGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SLGFHSIMYFPHQST*IPIALSLNLFPMGG Trigger: TCCACCCATGGGAAACAGATTTAACGAAAGAGCAATTGGAATTCATGTGCTCTGATGTGGGAAGTACATGATACTATGGAAGCCCAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS TCA 90 bp | TCCTTTTGGCAAAATCTCTCCTTCAGATACATCAGGGCCCTTGAATaGAATGCCACAGATTCTGATTCATTTGATCTTGGATGGAATCTA | + |
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Preference number: 5 (lower is better) Translates to: SFWQNLSFRYIRALE*NATDSDSFDLGWNL Trigger: TAGATTCCATCCAAGATCAAATGAATCAGAATCTGTGGCATTTCATTCAAGGGCCCTGATGTATCTGAAGGAGAGATTTTGCCAAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670826.1 |
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| CDS TCA 72 bp | CCTGGGCCTCTGGGCCTATGGTGGGAGGGGCTGCCATaGAGGTCTCTGACATGGCCTGGAGACATTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PGPLGLWWEGLP*RSLTWPGDIFP Trigger: AGGGAAAATGTCTCCAGGCCATGTCAGAGACCTTCATGGCAGCCCCTCCCACCATAGGCCCAGAGGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 72 bp | TGGCCTGAGCTCTACATTGGCCCCTTCAGCCACGGCTaGAATGGCTGGGACACAGGGCACCAAGTCCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: WPELYIGPFSHG*NGWDTGHQVLR Trigger: CCTTAGGACTTGGTGCCCTGTGTCCCAGCCATTCCAGCCGTGGCTGAAGGGGCCAATGTAGAGCTCAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 72 bp | GCTGTCAAGGTTTGGGGCTTCCACCCTCTGAAGCCATaGCCTGAGCTCTACATTGGCCCCTTCAGCCACGGC | + |
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Preference number: 6 (lower is better) Translates to: AVKVWGFHPLKP*PELYIGPFSHG Trigger: GCCGTGGCTGAAGGGGCCAATGTAGAGCTCAGGCCATGGCTTCAGAGGGTGGAAGCCCCAAACCTTGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS TCA 72 bp | GGCTGCACACAGCACAAGGACCCTGGACCTGGCCCATaGAACCACTTTTTCCTCCTGGGCCTCTGGGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: GCTQHKDPGPGP*NHFFLLGLWAY Trigger: ATAGGCCCAGAGGCCCAGGAGGAAAAAGTGGTTTCATGGGCCAGGTCCAGGGTCCTTGTGCTGTGTGCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 72 bp | AAAGCTGCCCAGGGTGGTGAAAGCTGCCCAGGGTGGTaGACTGAGTCTCTGCAAGTGCCTCACATCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: KAAQGGESCPGW*TESLQVPHISL Trigger: CAGTGAGATGTGAGGCACTTGCAGAGACTCAGTCCACCACCCTGGGCAGCTTTCACCACCCTGGGCAGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000550678.1 ENST00000552201.1 ENST00000648243.1 ENST00000668012.1 ENST00000670826.1 |
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| CDS CCA 72 bp | GGAAAAGCTGCCCAGGGTGGTGAAAGCTGCCCAGGGTaGTGGACTGAGTCTCTGCAAGTGCCTCACATCTCA | + |
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Preference number: 6 (lower is better) Translates to: GKAAQGGESCPG*WTESLQVPHIS Trigger: TGAGATGTGAGGCACTTGCAGAGACTCAGTCCACCACCCTGGGCAGCTTTCACCACCCTGGGCAGCTTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000550678.1 ENST00000552201.1 ENST00000648243.1 ENST00000668012.1 ENST00000670826.1 |
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| CDS TCA 72 bp | ACGTGGAAGCTGTCAAGGTTTGGGGCTTCCACCCTCTaGAGCCATGGCCTGAGCTCTACATTGGCCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TWKLSRFGASTL*SHGLSSTLAPS Trigger: TGAAGGGGCCAATGTAGAGCTCAGGCCATGGCTTCAGAGGGTGGAAGCCCCAAACCTTGACAGCTTCCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS GCA 72 bp | CTGGGGTCTGAAAGATGGTGGCCCTCTTCTCATAGCTaGACTAGGCAGTGCCCACTAGGAACTCTGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LGSERWWPSSHS*TRQCPLGTLCG Trigger: CCCACACAGAGTTCCTAGTGGGCACTGCCTAGTGCAGCTATGAGAAGAGGGCCACCATCTTTCAGACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 72 bp | CACCAAGTCCTAAGGCTGCACACAGCACAAGGACCCTaGACCTGGCCCATGAAACCACTTTTTCCTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: HQVLRLHTAQGP*TWPMKPLFPPG Trigger: CCCAGGAGGAAAAAGTGGTTTCATGGGCCAGGTCCAGGGTCCTTGTGCTGTGTGCAGCCTTAGGACTTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 72 bp | GATGGGTTCCCATGGTCTTGGGCAGCTCTGCCCCTATaGCTTTGTAGGATTCAGCCCTCACCCAGCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: DGFPWSWAALPL*LCRIQPSPSCF Trigger: AAAGCAGCTGGGTGAGGGCTGAATCCTACAAAGCCATAGGGGCAGAGCTGCCCAAGACCATGGGAACCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS GCA 72 bp | ATGCAAGAGATGGGTTCCCATGGTCTTGGGCAGCTCTaGCCCTATGGCTTTGTAGGATTCAGCCCTCACCCA | + |
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Preference number: 6 (lower is better) Translates to: MQEMGSHGLGQL*PYGFVGFSPHP Trigger: TGGGTGAGGGCTGAATCCTACAAAGCCATAGGGGCAGAGCTGCCCAAGACCATGGGAACCCATCTCTTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS TCA 72 bp | TCTCCTTTGACTCCAGGTCTCACAGCCACATCACACTaGTGCAAGAGATGGGTTCCCATGGTCTTGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPLTPGLTATSH*CKRWVPMVLGS Trigger: GCTGCCCAAGACCATGGGAACCCATCTCTTGCATCAGTGTGATGTGGCTGTGAGACCTGGAGTCAAAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS GCA 72 bp | CCCCTATGGCTTTGTAGGATTCAGCCCTCACCCAGCTaGTTTCACAGGCTGGCATTGAGTGTCTGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PLWLCRIQPSPS*FHRLALSVCSF Trigger: AAAGCTGCAGACACTCAATGCCAGCCTGTGAAAGCAGCTGGGTGAGGGCTGAATCCTACAAAGCCATAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 72 bp | GGCAGGATCAGGTTGTTACTGCTTTTGGGGGATCCTTaGTACCTGGCACAACTGTCTAGCAGAGGTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: GRIRLLLLLGDP*YLAQLSSRGAT Trigger: TGTGGCACCTCTGCTAGACAGTTGTGCCAGGTACCAAGGATCCCCCAAAAGCAGTAACAACCTGATCCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS CCA 72 bp | GTCAGTGGATCTACCATTCTGGGGTCTGAAAGATGGTaGCCCTCTTCTCATAGCTGCACTAGGCAGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VSGSTILGSERW*PSSHSCTRQCP Trigger: TGGGCACTGCCTAGTGCAGCTATGAGAAGAGGGCCACCATCTTTCAGACCCCAGAATGGTAGATCCACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS GCA 72 bp | TCACCCAGCTGCTTTCACAGGCTGGCATTGAGTGTCTaGAGCTTTTCCAGCAACACAGTGCAAGCTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SPSCFHRLALSV*SFSSNTVQAVS Trigger: ACTGACAGCTTGCACTGTGTTGCTGGAAAAGCTGCAGACACTCAATGCCAGCCTGTGAAAGCAGCTGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CAA 90 bp | GTGGATGTAAGTGGCAATGAAGGCAGGATCAGGTTGTTACTGCTTTaGGGGGATCCTTGGTACCTGGCACAACTGTCTAGCAGAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VDVSGNEGRIRLLLL*GDPWYLAQLSSRGA Trigger: GGCACCTCTGCTAGACAGTTGTGCCAGGTACCAAGGATCCCCCAAAAGCAGTAACAACCTGATCCTGCCTTCATTGCCACTTACATCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS CAA 90 bp | CTTTGTAGGATTCAGCCCTCACCCAGCTGCTTTCACAGGCTGGCATaGAGTGTCTGCAGCTTTTCCAGCAACACAGTGCAAGCTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LCRIQPSPSCFHRLA*SVCSFSSNTVQAVS Trigger: ACTGACAGCTTGCACTGTGTTGCTGGAAAAGCTGCAGACACTCAATGCCAGCCTGTGAAAGCAGCTGGGTGAGGGCTGAATCCTACAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CAA 90 bp | CCACGTCCTCCCAGCAAGCAGGGGAGCTGTCTTGTCATGGGATCTTaGACACTTAATACGAAGCCTGAAACATATGGCCCCAGAGTGATT | + |
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Preference number: 6 (lower is better) Translates to: PRPPSKQGSCLVMGS*TLNTKPETYGPRVI Trigger: AATCACTCTGGGGCCATATGTTTCAGGCTTCGTATTAAGTGTCAAAGATCCCATGACAAGACAGCTCCCCTGCTTGCTGGGAGGACGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552201.1 |
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| CDS CCA 72 bp | TCAGGTTGTTACTGCTTTTGGGGGATCCTTGGTACCTaGCACAACTGTCTAGCAGAGGTGCCACATACGTTC | + |
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Preference number: 6 (lower is better) Translates to: SGCYCFWGILGT*HNCLAEVPHTF Trigger: GAACGTATGTGGCACCTCTGCTAGACAGTTGTGCCAGGTACCAAGGATCCCCCAAAAGCAGTAACAACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS CCA 72 bp | GTGGCAATGAAGGCAGGATCAGGTTGTTACTGCTTTTaGGGGATCCTTGGTACCTGGCACAACTGTCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: VAMKAGSGCYCF*GILGTWHNCLA Trigger: TGCTAGACAGTTGTGCCAGGTACCAAGGATCCCCCAAAAGCAGTAACAACCTGATCCTGCCTTCATTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS CCA 72 bp | GCAACACAGTGCAAGCTGTCAGTGGATCTACCATTCTaGGGTCTGAAAGATGGTGGCCCTCTTCTCATAGCT | + |
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Preference number: 6 (lower is better) Translates to: ATQCKLSVDLPF*GLKDGGPLLIA Trigger: AGCTATGAGAAGAGGGCCACCATCTTTCAGACCCCAGAATGGTAGATCCACTGACAGCTTGCACTGTGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CAA 72 bp | TGGGTGGATGTAAGTGGCAATGAAGGCAGGATCAGGTaGTTACTGCTTTTGGGGGATCCTTGGTACCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: WVDVSGNEGRIR*LLLLGDPWYLA Trigger: TGCCAGGTACCAAGGATCCCCCAAAAGCAGTAACAACCTGATCCTGCCTTCATTGCCACTTACATCCACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS GCA 72 bp | GAGAGACTTGATTCCCAACACGTTCAGGATGAGTTATaGGAGATTCCAGTGGGTCTAGCGTCATCAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: ERLDSQHVQDEL*EIPVGLASSGV Trigger: CACACCTGATGACGCTAGACCCACTGGAATCTCGCATAACTCATCCTGAACGTGTTGGGAATCAAGTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000550678.1 ENST00000648243.1 ENST00000654861.1 |
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| CDS TCA 72 bp | ACTCCATGGTCTGCAGATGTGGACTTAGGTTTCTCTTaGCTGTGTCAGCTGGAGCAAGCAGGTAGAGTATCA | + |
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Preference number: 6 (lower is better) Translates to: TPWSADVDLGFS*LCQLEQAGRVS Trigger: TGATACTCTACCTGCTTGCTCCAGCTGACACAGTCAAGAGAAACCTAAGTCCACATCTGCAGACCATGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS TCA 72 bp | TGCCAAATTTATTGCTGGCCTGGCAAGGAAAAGTTCTaGCAGTCAGCTACAAGGTCAGTGGGTCTCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: CQIYCWPGKEKF*QSATRSVGLSK Trigger: CTTGGAGAGACCCACTGACCTTGTAGCTGACTGTCAGAACTTTTCCTTGCCAGGCCAGCAATAAATTTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000550678.1 ENST00000648243.1 ENST00000654861.1 |
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| CDS TCA 72 bp | ACATGGCTGGGGAGGTGTCAGAATCATGGCAGGAGGTaGAAGGCACTTTTTATATGGTGGTGGCAAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TWLGRCQNHGRR*KALFIWWWQEK Trigger: TTTCTCTTGCCACCACCATATAAAAAGTGCCTTTCACCTCCTGCCATGATTCTGACACCTCCCCAGCCATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS TCA 72 bp | GCTCCTTGCTACTCAAGCAAATTTCTGCAGCTGGCTTaGATTTCTCAGGTATGTAGCAAGGGACAGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: APCYSSKFLQLA*ISQVCSKGQQK Trigger: CTTCTGCTGTCCCTTGCTACATACCTGAGAAATTCAAGCCAGCTGCAGAAATTTGCTTGAGTAGCAAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS TCA 72 bp | CTGAAATCCAGTTGGAGTTTCCCAAACCTCAATTCTTaGCTTCTGTGCAACCTAAGGCTCAACACCACGTGG | + |
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Preference number: 6 (lower is better) Translates to: LKSSWSFPNLNS*LLCNLRLNTTW Trigger: CCACGTGGTGTTGAGCCTTAGGTTGCACAGAAGTCAAGAATTGAGGTTTGGGAAACTCCAACTGGATTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CAA 72 bp | CTGGCAAGCCTCAGGGAAGCACATCCCAGCAAGCAATaGAGTACATCAACCATTATTTCCCCATTTCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: LASLREAHPSKQ*STSTIISPFQN Trigger: GTTCTGAAATGGGGAAATAATGGTTGATGTACTCAATTGCTTGCTGGGATGTGCTTCCCTGAGGCTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS TCA 72 bp | TTTCCTCCTAAATCCCACAAGCAAAGTGGGCACCTGTaGAAAGAGCAACAAAGAGACCTAACCATGGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: FPPKSHKQSGHL*KEQQRDLTMVV Trigger: GACAACCATGGTTAGGTCTCTTTGTTGCTCTTTTCACAGGTGCCCACTTTGCTTGTGGGATTTAGGAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654861.1 |
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| CDS CAA 72 bp | GTGACTTTCAGATTACCAGGGCTAATCCTGAGAGACTaGATTCCCAACACGTTCAGGATGAGTTATGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: VTFRLPGLILRD*IPNTFRMSYAR Trigger: TCTCGCATAACTCATCCTGAACGTGTTGGGAATCAAGTCTCTCAGGATTAGCCCTGGTAATCTGAAAGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000550678.1 ENST00000648243.1 ENST00000654861.1 |
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| CDS CAA 72 bp | TCTGAAATCCAGTTGGAGTTTCCCAAACCTCAATTCTaGACTTCTGTGCAACCTAAGGCTCAACACCACGTG | + |
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Preference number: 6 (lower is better) Translates to: SEIQLEFPKPQF*TSVQPKAQHHV Trigger: CACGTGGTGTTGAGCCTTAGGTTGCACAGAAGTCAAGAATTGAGGTTTGGGAAACTCCAACTGGATTTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS TCA 72 bp | GGCAGTCAAATTTTAAAGCTCCAAAATGATCTCCTTTaGCTCCAGGTCTCACAGCCACATCACACTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: GSQILKLQNDLL*LQVSQPHHTDA Trigger: TGCATCAGTGTGATGTGGCTGTGAGACCTGGAGTCAAAGGAGATCATTTTGGAGCTTTAAAATTTGACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS TCA 72 bp | CACTCCAGCCTTTTCTGGACTACTCTTTGGCTAGTCTaGAAGTTGGGATTCCAAGCATTTAAGAGGTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: HSSLFWTTLWLV*KLGFQAFKRFL Trigger: CAAAAACCTCTTAAATGCTTGGAATCCCAACTTTCAGACTAGCCAAAGAGTAGTCCAGAAAAGGCTGGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS GCA 72 bp | CATGTACTTCCCACATCAGAGCACATGAATTCCAATTaGTCTTTCGTTAAATCTGTTTCCCATGGGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: HVLPTSEHMNSN*SFVKSVSHGWM Trigger: CATCCACCCATGGGAAACAGATTTAACGAAAGAGCAATTGGAATTCATGTGCTCTGATGTGGGAAGTACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS GCA 72 bp | ATTAACATTGGGCTCCTTGCTACTCAAGCAAATTTCTaGAGCTGGCTTGAATTTCTCAGGTATGTAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: INIGLLATQANF*SWLEFLRYVAR Trigger: CCTTGCTACATACCTGAGAAATTCAAGCCAGCTGCAGAAATTTGCTTGAGTAGCAAGGAGCCCAATGTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CCA 72 bp | TCAATGTCCAAAACAATGCCAAATTTATTGCTGGCCTaGCAAGGAAAAGTTCTGACAGTCAGCTACAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SMSKTMPNLLLA*QGKVLTVSYKV Trigger: GACCTTGTAGCTGACTGTCAGAACTTTTCCTTGCCAGGCCAGCAATAAATTTGGCATTGTTTTGGACATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648243.1 |
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| CDS TCA 72 bp | TGCAGCAAACTTTTGCCTGGGCATCCATACATTTTCTaGAATCCAGTTGGAGTTTCCCAAACCTCAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: CSKLLPGHPYIF*NPVGVSQTSIL Trigger: AAGAATTGAGGTTTGGGAAACTCCAACTGGATTTCAGAAAATGTATGGATGCCCAGGCAAAAGTTTGCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CAA 72 bp | TTTTGCCTGGGCATCCATACATTTTCTGAAATCCAGTaGGAGTTTCCCAAACCTCAATTCTTGACTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FCLGIHTFSEIQ*EFPKPQFLTSV Trigger: CACAGAAGTCAAGAATTGAGGTTTGGGAAACTCCAACTGGATTTCAGAAAATGTATGGATGCCCAGGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668012.1 |
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| CDS CAA 72 bp | TTTGGCAAAATCTCTCCTTCAGATACATCAGGGCCCTaGAATGAAATGCCACAGATTCTGATTCATTTGATC | + |
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Preference number: 6 (lower is better) Translates to: FGKISPSDTSGP*NEMPQILIHLI Trigger: GATCAAATGAATCAGAATCTGTGGCATTTCATTCAAGGGCCCTGATGTATCTGAAGGAGAGATTTTGCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670826.1 |
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| CDS TCA 72 bp | TTCCATAGTATCATGTACTTCCCACATCAGAGCACATaGATTCCAATTGCTCTTTCGTTAAATCTGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: FHSIMYFPHQST*IPIALSLNLFP Trigger: GGGAAACAGATTTAACGAAAGAGCAATTGGAATTCATGTGCTCTGATGTGGGAAGTACATGATACTATGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550678.1 |
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| CDS TCA 72 bp | TCAAATATATCAGACAGAAATTTGAGTTCAGGGCTATaGTTGCACCACATGGTAGAGATGCCACTTCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SNISDRNLSSGL*LHHMVEMPLLD Trigger: ATCAAGAAGTGGCATCTCTACCATGTGGTGCAATCATAGCCCTGAACTCAAATTTCTGTCTGATATATTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000550678.1 ENST00000648243.1 ENST00000654861.1 |
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