Pregenerated sensors for LINC02384 (Homo sapiens)
Ensembl gene IDs: ENSG00000251301Ensembl transcript IDs: ENST00000360485.3, ENST00000441255.7, ENST00000536094.1, ENST00000536112.1, ENST00000539404.1, ENST00000541707.1, ENST00000542875.1, ENST00000546086.1, ENST00000653144.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCATGGACCCTTGCCACAGCCTCTCAAGGATTCACACTTCACACTaGCAGAGCACTCTCTCACTCCTCCTGGAGATACTGGCTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GMDPCHSLSRIHTSH*QSTLSLLLEILAPS Trigger: AGAAGGAGCCAGTATCTCCAGGAGGAGTGAGAGAGTGCTCTGCCAGTGTGAAGTGTGAATCCTTGAGAGGCTGTGGCAAGGGTCCATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS CCA 90 bp | CAAGGATTCACACTTCACACTGGCAGAGCACTCTCTCACTCCTCCTaGAGATACTGGCTCCTTCTTGACCTGCAGGCAGAGCACCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: QGFTLHTGRALSHSS*RYWLLLDLQAEHQN Trigger: GTTCTGGTGCTCTGCCTGCAGGTCAAGAAGGAGCCAGTATCTCCAGGAGGAGTGAGAGAGTGCTCTGCCAGTGTGAAGTGTGAATCCTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS TCA 90 bp | GCAGCCGGAGCATCTGCTCAATCCAAATCACACTGCCCAGAGGGATaGGAGCCAGAAGTGGATCCAAGTTTTCTGGGTCTTCTGATTCGA | + |
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Preference number: 5 (lower is better) Translates to: AAGASAQSKSHCPEG*EPEVDPSFLGLLIR Trigger: TCGAATCAGAAGACCCAGAAAACTTGGATCCACTTCTGGCTCTCATCCCTCTGGGCAGTGTGATTTGGATTGAGCAGATGCTCCGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360485.3 |
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| CDS TCA 90 bp | TGGCAGAGCACTCTCTCACTCCTCCTGGAGATACTGGCTCCTTCTTaGCCTGCAGGCAGAGCACCAGAACCATGTAAAAATGTGACTCAG | + |
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Preference number: 5 (lower is better) Translates to: WQSTLSLLLEILAPS*PAGRAPEPCKNVTQ Trigger: CTGAGTCACATTTTTACATGGTTCTGGTGCTCTGCCTGCAGGTCAAGAAGGAGCCAGTATCTCCAGGAGGAGTGAGAGAGTGCTCTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS GCA 90 bp | ACAGCCTCCAGCTGTTCTTGTTCTACACATTCAGGCATGGACCCTTaGCACAGCCTCTCAAGGATTCACACTTCACACTGGCAGAGCACT | + |
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Preference number: 5 (lower is better) Translates to: TASSCSCSTHSGMDP*HSLSRIHTSHWQST Trigger: AGTGCTCTGCCAGTGTGAAGTGTGAATCCTTGAGAGGCTGTGGCAAGGGTCCATGCCTGAATGTGTAGAACAAGAACAGCTGGAGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS CCA 90 bp | CCTTTCTCTACTGTAGAGGTCAGCGAGGATGAAGAGAGCCAGAAATaGGCATTGGGTCAGTCAAGCCATGCTTCTGACCTGCAAAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PFSTVEVSEDEESQK*ALGQSSHASDLQSL Trigger: GAGGCTTTGCAGGTCAGAAGCATGGCTTGACTGACCCAATGCCCATTTCTGGCTCTCTTCATCCTCGCTGACCTCTACAGTAGAGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CCA 90 bp | ACACTTCACACTGGCAGAGCACTCTCTCACTCCTCCTGGAGATACTaGCTCCTTCTTGACCTGCAGGCAGAGCACCAGAACCATGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: TLHTGRALSHSSWRY*LLLDLQAEHQNHVK Trigger: TTTTACATGGTTCTGGTGCTCTGCCTGCAGGTCAAGAAGGAGCCAGTATCTCCAGGAGGAGTGAGAGAGTGCTCTGCCAGTGTGAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS TCA 90 bp | CCATTTGCCGGCAAGATAGGAGGGACAAGGAAGAGGAGAGACCACTaGCTTGTGATAAAATGTGAAAGCTGCCCTGCAGATTACCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: PFAGKIGGTRKRRDH*LVIKCESCPADYLG Trigger: GCCAAGGTAATCTGCAGGGCAGCTTTCACATTTTATCACAAGTCAGTGGTCTCTCCTCTTCCTTGTCCCTCCTATCTTGCCGGCAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CCA 90 bp | TCATGTTTGACAGTTCTTGCTGAGAAGACTCAGAGAGCTAGAGGCTaGTACAGCTGGGGCTCCTCAGGCATCTCGATTTCTGTGTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SCLTVLAEKTQRARG*YSWGSSGISISVCS Trigger: AGAACACACAGAAATCGAGATGCCTGAGGAGCCCCAGCTGTACCAGCCTCTAGCTCTCTGAGTCTTCTCAGCAAGAACTGTCAAACATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000536094.1 |
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| CDS TCA 90 bp | GAACTGTTACAAGGCCACCCCTTGCTTCAAGGGAGGTTAGAGCAGTaGATATTCAGCTTCTCCTTTCTCTACTGTAGAGGTCAGCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: ELLQGHPLLQGRLEQ*IFSFSFLYCRGQRG Trigger: TCCTCGCTGACCTCTACAGTAGAGAAAGGAGAAGCTGAATATTCACTGCTCTAACCTCCCTTGAAGCAAGGGGTGGCCTTGTAACAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CCA 90 bp | CTGGGAAGAAAAAGAGGTATAATTGGACTTACAGTTCCACGTGGCTaGGGAGGACTTAGAATCATGGTGGGAGGCAAAAGGTCCTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: LGRKRGIIGLTVPRG*GGLRIMVGGKRSFL Trigger: TAAGAAGGACCTTTTGCCTCCCACCATGATTCTAAGTCCTCCCCAGCCACGTGGAACTGTAAGTCCAATTATACCTCTTTTTCTTCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS CCA 90 bp | AGGCATCTCGATTTCTGTGTGTTCTCCCACATGAGTTCTTCAGCATaGCAGCTTCAATGTAGACTGACTTCTAACATGTCAGCTCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: RHLDFCVFSHMSSSA*QLQCRLTSNMSAQS Trigger: GCTTTGAGCTGACATGTTAGAAGTCAGTCTACATTGAAGCTGCCATGCTGAAGAACTCATGTGGGAGAACACACAGAAATCGAGATGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000536094.1 |
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| CDS TCA 90 bp | ACAGACACACACACACACACTGAGTTTAGATCAACAAGCATATACTaGGTGCCCATTACCAGGTGTCATGCTGGAATTATAGGCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: TDTHTHTEFRSTSIY*VPITRCHAGIIGTG Trigger: ACCTGTGCCTATAATTCCAGCATGACACCTGGTAATGGGCACTCAGTATATGCTTGTTGATCTAAACTCAGTGTGTGTGTGTGTGTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS TCA 90 bp | AAAGGTCCTTCTTACACGGCGGCAGCAAGAGAAACTTTAACTTTCTaGTATCTTCTAAGAGGCAGATTTAGAAACCTCTTCCTGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: KGPSYTAAARETLTF*YLLRGRFRNLFLEK Trigger: TTTCTCCAGGAAGAGGTTTCTAAATCTGCCTCTTAGAAGATATCAGAAAGTTAAAGTTTCTCTTGCTGCCGCCGTGTAAGAAGGACCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000542875.1 |
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| CDS TCA 90 bp | TCCTTGATGCTTCCCTTTAAGCATTTTCCGCAAAAGCTGTCTTCCTaGATCCTGATTGATGTCTTTGTTCTTCATCATCATCGAGATACT | + |
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Preference number: 5 (lower is better) Translates to: SLMLPFKHFPQKLSS*ILIDVFVLHHHRDT Trigger: AGTATCTCGATGATGATGAAGAACAAAGACATCAATCAGGATTCAGGAAGACAGCTTTTGCGGAAAATGCTTAAAGGGAAGCATCAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000539404.1 ENST00000541707.1 ENST00000546086.1 ENST00000653144.1 |
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| CDS CAA 72 bp | GGAAGGGCTTGGTGGGTGGCAGCTTGTCTGCTCCACTaGGCACCAGCTAGGGCACTTGAAGACTGGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GRAWWVAACLLH*APARALEDWGQ Trigger: CTGGCCCCAGTCTTCAAGTGCCCTAGCTGGTGCCAAGTGGAGCAGACAAGCTGCCACCCACCAAGCCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000536094.1 |
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| CDS CCA 72 bp | ACTGGCAGAGCACTCTCTCACTCCTCCTGGAGATACTaGCTCCTTCTTGACCTGCAGGCAGAGCACCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: TGRALSHSSWRY*LLLDLQAEHQN Trigger: GTTCTGGTGCTCTGCCTGCAGGTCAAGAAGGAGCCAGTATCTCCAGGAGGAGTGAGAGAGTGCTCTGCCAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS CCA 72 bp | ACACTTCACACTGGCAGAGCACTCTCTCACTCCTCCTaGAGATACTGGCTCCTTCTTGACCTGCAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TLHTGRALSHSS*RYWLLLDLQAE Trigger: CTCTGCCTGCAGGTCAAGAAGGAGCCAGTATCTCCAGGAGGAGTGAGAGAGTGCTCTGCCAGTGTGAAGTGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS CCA 72 bp | GCTGAGAAGACTCAGAGAGCTAGAGGCTGGTACAGCTaGGGCTCCTCAGGCATCTCGATTTCTGTGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: AEKTQRARGWYS*GSSGISISVCS Trigger: AGAACACACAGAAATCGAGATGCCTGAGGAGCCCCAGCTGTACCAGCCTCTAGCTCTCTGAGTCTTCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000536094.1 |
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| CDS CAA 72 bp | GAGGTCAGCGAGGATGAAGAGAGCCAGAAATGGGCATaGGGTCAGTCAAGCCATGCTTCTGACCTGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: EVSEDEESQKWA*GQSSHASDLQS Trigger: GCTTTGCAGGTCAGAAGCATGGCTTGACTGACCCAATGCCCATTTCTGGCTCTCTTCATCCTCGCTGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CAA 90 bp | CACAGCCTCCAGCTGTTCTTGTTCTACACATTCAGGCATGGACCCTaGCCACAGCCTCTCAAGGATTCACACTTCACACTGGCAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: HSLQLFLFYTFRHGP*PQPLKDSHFTLAEH Trigger: GTGCTCTGCCAGTGTGAAGTGTGAATCCTTGAGAGGCTGTGGCAAGGGTCCATGCCTGAATGTGTAGAACAAGAACAGCTGGAGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS GCA 72 bp | CCTCAGGCAAGTTCCTCAGCCTTTCTAAGCCGTAGCTaGTTTACTCCAAATCACACTGCCCAGAGGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: PQASSSAFLSRS*FTPNHTAQRDE Trigger: CTCATCCCTCTGGGCAGTGTGATTTGGAGTAAAGCAGCTACGGCTTAGAAAGGCTGAGGAACTTGCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CCA 72 bp | CAGCCTCCAGCTGTTCTTGTTCTACACATTCAGGCATaGACCCTTGCCACAGCCTCTCAAGGATTCACACTT | + |
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Preference number: 6 (lower is better) Translates to: QPPAVLVLHIQA*TLATASQGFTL Trigger: AAGTGTGAATCCTTGAGAGGCTGTGGCAAGGGTCCATGCCTGAATGTGTAGAACAAGAACAGCTGGAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000542875.1 |
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| CDS CAA 72 bp | CCTACACCATGCCCAACTTCCTCAGTGCTAGTAGCTTaGGATGTGAGAGGAAGACCACACACACACACACAC | + |
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Preference number: 6 (lower is better) Translates to: PTPCPTSSVLVA*DVRGRPHTHTH Trigger: GTGTGTGTGTGTGTGTGGTCTTCCTCTCACATCCAAAGCTACTAGCACTGAGGAAGTTGGGCATGGTGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS TCA 72 bp | GCATCTGCTCAATCCAAATCACACTGCCCAGAGGGATaGGAGCCAGAAGTGGATCCAAGTTTTCTGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: ASAQSKSHCPEG*EPEVDPSFLGL Trigger: AAGACCCAGAAAACTTGGATCCACTTCTGGCTCTCATCCCTCTGGGCAGTGTGATTTGGATTGAGCAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360485.3 |
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| CDS TCA 72 bp | ACTCTCTCACTCCTCCTGGAGATACTGGCTCCTTCTTaGCCTGCAGGCAGAGCACCAGAACCATGTAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: TLSLLLEILAPS*PAGRAPEPCKN Trigger: ATTTTTACATGGTTCTGGTGCTCTGCCTGCAGGTCAAGAAGGAGCCAGTATCTCCAGGAGGAGTGAGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS CCA 72 bp | TTTATTTTGTTCCTAGTCTGCAATTTGGGAAGGGCTTaGTGGGTGGCAGCTTGTCTGCTCCACTTGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: FILFLVCNLGRA*WVAACLLHLAP Trigger: TGGTGCCAAGTGGAGCAGACAAGCTGCCACCCACCAAGCCCTTCCCAAATTGCAGACTAGGAACAAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536094.1 |
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| CDS CCA 72 bp | CATTTGAAGAAGCCACCTGATATAGTTCCACGTGGCTaGGGAGGACTTAGAATCATGGTGGGAGGCAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: HLKKPPDIVPRG*GGLRIMVGGKR Trigger: CCTTTTGCCTCCCACCATGATTCTAAGTCCTCCCCAGCCACGTGGAACTATATCAGGTGGCTTCTTCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546086.1 |
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| CDS CAA 72 bp | CCGTGTAAGCACAAACACTCTCCTCGCCCTGCCAATTaGCCAGTCTACTGTCTCATGCTATGGTCTCATACA | + |
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Preference number: 6 (lower is better) Translates to: PCKHKHSPRPAN*PVYCLMLWSHT Trigger: TGTATGAGACCATAGCATGAGACAGTAGACTGGCAAATTGGCAGGGCGAGGAGAGTGTTTGTGCTTACACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS TCA 72 bp | GAGGACGCTGAATGTGAAGAAAGAATGCAACCACAGTaGGAGCTCCAGTACAATCCCAGGCTACAACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: EDAECEERMQPQ*ELQYNPRLQLP Trigger: TGGAAGTTGTAGCCTGGGATTGTACTGGAGCTCTCACTGTGGTTGCATTCTTTCTTCACATTCAGCGTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS TCA 72 bp | CCAGAAATGGGCATTGGGTCAGTCAAGCCATGCTTCTaGCCTGCAAAGCCTCCATATCAGACCCAAAAATTC | + |
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Preference number: 6 (lower is better) Translates to: PEMGIGSVKPCF*PAKPPYQTQKF Trigger: GAATTTTTGGGTCTGATATGGAGGCTTTGCAGGTCAGAAGCATGGCTTGACTGACCCAATGCCCATTTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS TCA 72 bp | CAAGGCCACCCCTTGCTTCAAGGGAGGTTAGAGCAGTaGATATTCAGCTTCTCCTTTCTCTACTGTAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: QGHPLLQGRLEQ*IFSFSFLYCRG Trigger: ACCTCTACAGTAGAGAAAGGAGAAGCTGAATATTCACTGCTCTAACCTCCCTTGAAGCAAGGGGTGGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS GCA 72 bp | AACAAGCATATACTGAGTGCCCATTACCAGGTGTCATaGTGGAATTATAGGCACAGGTGGAGCCTCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: NKHILSAHYQVS*WNYRHRWSLRS Trigger: ACTCCTGAGGCTCCACCTGTGCCTATAATTCCAGCATGACACCTGGTAATGGGCACTCAGTATATGCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS GCA 72 bp | CGTGTAAGCACAAACACTCTCCTCGCCCTGCCAATTTaGCAGTCTACTGTCTCATGCTATGGTCTCATACAA | + |
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Preference number: 6 (lower is better) Translates to: RVSTNTLLALPI*QSTVSCYGLIQ Trigger: TTGTATGAGACCATAGCATGAGACAGTAGACTGGCAAATTGGCAGGGCGAGGAGAGTGTTTGTGCTTACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CAA 72 bp | GGCCAGAGTCATCTGAAGGCTGCTTCACTCTCATGTTaGACAGTTCTTGCTGAGAAGACTCAGAGAGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: GQSHLKAASLSC*TVLAEKTQRAR Trigger: TCTAGCTCTCTGAGTCTTCTCAGCAAGAACTGTCAAACATGAGAGTGAAGCAGCCTTCAGATGACTCTGGCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000536094.1 |
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| CDS CAA 90 bp | TTTCTCTTTCCTACACCATGCCCAACTTCCTCAGTGCTAGTAGCTTaGGATGTGAGAGGAAGACCACACACACACACACACACACACACA | + |
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Preference number: 6 (lower is better) Translates to: FLFPTPCPTSSVLVA*DVRGRPHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGGTCTTCCTCTCACATCCAAAGCTACTAGCACTGAGGAAGTTGGGCATGGTGTAGGAAAGAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CAA 90 bp | TTCATTGCCCCGTGTAAGCACAAACACTCTCCTCGCCCTGCCAATTaGCCAGTCTACTGTCTCATGCTATGGTCTCATACAAGGATAAAA | + |
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Preference number: 6 (lower is better) Translates to: FIAPCKHKHSPRPAN*PVYCLMLWSHTRIK Trigger: TTTTATCCTTGTATGAGACCATAGCATGAGACAGTAGACTGGCAAATTGGCAGGGCGAGGAGAGTGTTTGTGCTTACACGGGGCAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS GCA 72 bp | AATGGGCATTGGGTCAGTCAAGCCATGCTTCTGACCTaGAAAGCCTCCATATCAGACCCAAAAATTCACAAG | + |
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Preference number: 6 (lower is better) Translates to: NGHWVSQAMLLT*KASISDPKIHK Trigger: CTTGTGAATTTTTGGGTCTGATATGGAGGCTTTGCAGGTCAGAAGCATGGCTTGACTGACCCAATGCCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CCA 72 bp | TCTCTGAATTCACACCCCAGTTTATCTCTCAGTAGCTaGATAGCCTCAGGCAAGTTCCTCAGCCTTTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: SLNSHPSLSLSS*IASGKFLSLSK Trigger: CTTAGAAAGGCTGAGGAACTTGCCTGAGGCTATCCAGCTACTGAGAGATAAACTGGGGTGTGAATTCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000536094.1 |
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| CDS CCA 72 bp | AAAAGAGGTATAATTGGACTTACAGTTCCACGTGGCTaGGGAGGACTTAGAATCATGGTGGGAGGCAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: KRGIIGLTVPRG*GGLRIMVGGKR Trigger: CCTTTTGCCTCCCACCATGATTCTAAGTCCTCCCCAGCCACGTGGAACTGTAAGTCCAATTATACCTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542875.1 |
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| CDS CAA 72 bp | CCAAGGTCACACAACTGCAGAGAAACTCTCCGGCGTTaGTCTAGCTCTCTTACAAAAGATGCAAAGGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: PRSHNCRETLRR*SSSLTKDAKGV Trigger: AACTCCCTTTGCATCTTTTGTAAGAGAGCTAGACAAACGCCGGAGAGTTTCTCTGCAGTTGTGTGACCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536112.1 |
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| CDS CAA 90 bp | AGCCAGCTAGCACATAGGGTGCCGGCTGCTTCAGATGCAACTTCATaGCCATACACCGTGGTCATGATTTACTATAAAGTAATGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SQLAHRVPAASDATS*PYTVVMIYYKVMLF Trigger: AAACAGCATTACTTTATAGTAAATCATGACCACGGTGTATGGCAATGAAGTTGCATCTGAAGCAGCCGGCACCCTATGTGCTAGCTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360485.3 ENST00000536112.1 |
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| CDS GCA 72 bp | AGAGTAATTTGGTACACGAACTGGTTGTCCCTTCCATaGCACCTCTCCATTGACAGTTATGCTGGAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: RVIWYTNWLSLP*HLSIDSYAGNE Trigger: CTCATTTCCAGCATAACTGTCAATGGAGAGGTGGCATGGAAGGGACAACCAGTTCGTGTACCAAATTACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CAA 72 bp | GCACATAGGGTGCCGGCTGCTTCAGATGCAACTTCATaGCCATACACCGTGGTCATGATTTACTATAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: AHRVPAASDATS*PYTVVMIYYKV Trigger: TACTTTATAGTAAATCATGACCACGGTGTATGGCAATGAAGTTGCATCTGAAGCAGCCGGCACCCTATGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360485.3 ENST00000536112.1 |
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| CDS CAA 90 bp | AGAAACTACCCAAGGTCACACAACTGCAGAGAAACTCTCCGGCGTTaGTCTAGCTCTCTTACAAAAGATGCAAAGGGAGTTTATCATGGT | + |
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Preference number: 6 (lower is better) Translates to: RNYPRSHNCRETLRR*SSSLTKDAKGVYHG Trigger: ACCATGATAAACTCCCTTTGCATCTTTTGTAAGAGAGCTAGACAAACGCCGGAGAGTTTCTCTGCAGTTGTGTGACCTTGGGTAGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536112.1 |
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| CDS TCA 72 bp | AACCTAGCATGGAGAGTCATGCAGTGTCACATCTACTaGATTCTACTAGTTAGAATCAAGTGGGTAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: NLAWRVMQCHIY*ILLVRIKWVRL Trigger: CAGCCTTACCCACTTGATTCTAACTAGTAGAATTCAGTAGATGTGACACTGCATGACTCTCCATGCTAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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| CDS CCA 72 bp | GATTTCTGTGTGTTCTCCCACATGAGTTCTTCAGCATaGCAGCTTCAATGTAGACTGACTTCTAACATGTCA | + |
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Preference number: 6 (lower is better) Translates to: DFCVFSHMSSSA*QLQCRLTSNMS Trigger: TGACATGTTAGAAGTCAGTCTACATTGAAGCTGCCATGCTGAAGAACTCATGTGGGAGAACACACAGAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000536094.1 |
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| CDS CAA 90 bp | TTGATGTCTTTGTTCTTCATCATCATCGAGATACTTAAAAATCATTaGAAGAAGCCACCTGATATAGTTCCACGTGGCTGGGGAGGACTT | + |
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Preference number: 6 (lower is better) Translates to: LMSLFFIIIEILKNH*KKPPDIVPRGWGGL Trigger: AAGTCCTCCCCAGCCACGTGGAACTATATCAGGTGGCTTCTTCAAATGATTTTTAAGTATCTCGATGATGATGAAGAACAAAGACATCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546086.1 |
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| CDS TCA 72 bp | TCTTACACGGCGGCAGCAAGAGAAACTTTAACTTTCTaGTATCTTCTAAGAGGCAGATTTAGAAACCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SYTAAARETLTF*YLLRGRFRNLF Trigger: GAAGAGGTTTCTAAATCTGCCTCTTAGAAGATATCAGAAAGTTAAAGTTTCTCTTGCTGCCGCCGTGTAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441255.7 ENST00000542875.1 |
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| CDS TCA 72 bp | TTAAGCATTTTCCGCAAAAGCTGTCTTCCTGAATCCTaGTTGATGTCTTTGTTCTTCATCATCATCGAGATA | + |
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Preference number: 6 (lower is better) Translates to: LSIFRKSCLPES*LMSLFFIIIEI Trigger: TATCTCGATGATGATGAAGAACAAAGACATCAATCAGGATTCAGGAAGACAGCTTTTGCGGAAAATGCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000539404.1 ENST00000541707.1 ENST00000546086.1 ENST00000653144.1 |
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| CDS TCA 72 bp | ACCACTCTTAAACTTTCAAATATCAACACCAATCCTTaGTGCTTCCCTTTAAGCATTTTCCGCAAAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: TTLKLSNINTNP*CFPLSIFRKSC Trigger: ACAGCTTTTGCGGAAAATGCTTAAAGGGAAGCATCAAGGATTGGTGTTGATATTTGAAAGTTTAAGAGTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000539404.1 ENST00000541707.1 ENST00000546086.1 ENST00000653144.1 |
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| CDS CCA 72 bp | CTGTTCATCTATAATTCTGCTCTACCATTTTTAGATTaGCATATTGTCTCAAAGTTGCAAGCTGACTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LFIYNSALPFLD*HIVSKLQADCY Trigger: ATAGCAGTCAGCTTGCAACTTTGAGACAATATGCCAATCTAAAAATGGTAGAGCAGAATTATAGATGAACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441255.7 |
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