Pregenerated sensors for LINC02383 (Homo sapiens)
Ensembl gene IDs: ENSG00000248143Ensembl transcript IDs: ENST00000508563.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCTGGTCCTTTCTGCCTCTGCTCTGTCAGTCATCCCTCCTGGGCTaGCTTGGAAAGGATCTTGTACTTGGTCAGGTAGGCTCGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GWSFLPLLCQSSLLG*LGKDLVLGQVGSFS Trigger: AGAGAACGAGCCTACCTGACCAAGTACAAGATCCTTTCCAAGTCAGCCCAGGAGGGATGACTGACAGAGCAGAGGCAGAAAGGACCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS GCA 90 bp | CCTTGGGATCAACACTTATCCTGCTCCAGAATGGCTGGTCCTTTCTaGCTCTGCTCTGTCAGTCATCCCTCCTGGGCTGACTTGGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: PWDQHLSCSRMAGPF*LCSVSHPSWADLER Trigger: CCTTTCCAAGTCAGCCCAGGAGGGATGACTGACAGAGCAGAGGCAGAAAGGACCAGCCATTCTGGAGCAGGATAAGTGTTGATCCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS CCA 90 bp | GTCCTTTCTGCCTCTGCTCTGTCAGTCATCCCTCCTGGGCTGACTTaGAAAGGATCTTGTACTTGGTCAGGTAGGCTCGTTCTCTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: VLSASALSVIPPGLT*KGSCTWSGRLVLCS Trigger: ACTGCAGAGAACGAGCCTACCTGACCAAGTACAAGATCCTTTCCAAGTCAGCCCAGGAGGGATGACTGACAGAGCAGAGGCAGAAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS CCA 90 bp | TTTTCTATGCGAGCCCTTGGGATCAACACTTATCCTGCTCCAGAATaGCTGGTCCTTTCTGCCTCTGCTCTGTCAGTCATCCCTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: FSMRALGINTYPAPE*LVLSASALSVIPPG Trigger: CCCAGGAGGGATGACTGACAGAGCAGAGGCAGAAAGGACCAGCCATTCTGGAGCAGGATAAGTGTTGATCCCAAGGGCTCGCATAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS GCA 90 bp | TGTGCACGTGTTTTCTATGCGAGCCCTTGGGATCAACACTTATCCTaGTCCAGAATGGCTGGTCCTTTCTGCCTCTGCTCTGTCAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: CARVFYASPWDQHLS*SRMAGPFCLCSVSH Trigger: ATGACTGACAGAGCAGAGGCAGAAAGGACCAGCCATTCTGGAGCAGGATAAGTGTTGATCCCAAGGGCTCGCATAGAAAACACGTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS GCA 90 bp | TACAAGCAGATTAGGATACTGAGTTTAATGTGCACGTGTTTTCTATaGGAGCCCTTGGGATCAACACTTATCCTGCTCCAGAATGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: YKQIRILSLMCTCFL*EPLGSTLILLQNGW Trigger: CCAGCCATTCTGGAGCAGGATAAGTGTTGATCCCAAGGGCTCGCATAGAAAACACGTGCACATTAAACTCAGTATCCTAATCTGCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS GCA 90 bp | GTAATAATAATAAATTTGAGACCCGGCTCAATAATGATTTTTCTCTaGAATGGTGGCAACTTTAATCTTCCCGAATTCCTACTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: VIIINLRPGSIMIFL*NGGNFNLPEFLLSS Trigger: GGAAGAGAGTAGGAATTCGGGAAGATTAAAGTTGCCACCATTGCAGAGAAAAATCATTATTGAGCCGGGTCTCAAATTTATTATTATTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS CCA 72 bp | GCCTCTGCTCTGTCAGTCATCCCTCCTGGGCTGACTTaGAAAGGATCTTGTACTTGGTCAGGTAGGCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: ASALSVIPPGLT*KGSCTWSGRLV Trigger: AACGAGCCTACCTGACCAAGTACAAGATCCTTTCCAAGTCAGCCCAGGAGGGATGACTGACAGAGCAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS CCA 72 bp | GGTCCTTTCTGCCTCTGCTCTGTCAGTCATCCCTCCTaGGCTGACTTGGAAAGGATCTTGTACTTGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GPFCLCSVSHPS*ADLERILYLVR Trigger: CCTGACCAAGTACAAGATCCTTTCCAAGTCAGCCCAGGAGGGATGACTGACAGAGCAGAGGCAGAAAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS CCA 72 bp | CCCTTGGGATCAACACTTATCCTGCTCCAGAATGGCTaGTCCTTTCTGCCTCTGCTCTGTCAGTCATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PLGSTLILLQNG*SFLPLLCQSSL Trigger: GAGGGATGACTGACAGAGCAGAGGCAGAAAGGACCAGCCATTCTGGAGCAGGATAAGTGTTGATCCCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS CCA 72 bp | CGAGCCCTTGGGATCAACACTTATCCTGCTCCAGAATaGCTGGTCCTTTCTGCCTCTGCTCTGTCAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: RALGINTYPAPE*LVLSASALSVI Trigger: GATGACTGACAGAGCAGAGGCAGAAAGGACCAGCCATTCTGGAGCAGGATAAGTGTTGATCCCAAGGGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS TCA 72 bp | TTTCTGCCTCTGCTCTGTCAGTCATCCCTCCTGGGCTaGCTTGGAAAGGATCTTGTACTTGGTCAGGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: FLPLLCQSSLLG*LGKDLVLGQVG Trigger: GCCTACCTGACCAAGTACAAGATCCTTTCCAAGTCAGCCCAGGAGGGATGACTGACAGAGCAGAGGCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS GCA 72 bp | GTTTTCTATGCGAGCCCTTGGGATCAACACTTATCCTaGTCCAGAATGGCTGGTCCTTTCTGCCTCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VFYASPWDQHLS*SRMAGPFCLCS Trigger: AGAGCAGAGGCAGAAAGGACCAGCCATTCTGGAGCAGGATAAGTGTTGATCCCAAGGGCTCGCATAGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS CCA 72 bp | ATCCCTCCTGGGCTGACTTGGAAAGGATCTTGTACTTaGTCAGGTAGGCTCGTTCTCTGCAGTTCAGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: IPPGLTWKGSCT*SGRLVLCSSGK Trigger: TTTACCTGAACTGCAGAGAACGAGCCTACCTGACCAAGTACAAGATCCTTTCCAAGTCAGCCCAGGAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS CAA 72 bp | CTGAGTTTAATGTGCACGTGTTTTCTATGCGAGCCCTaGGGATCAACACTTATCCTGCTCCAGAATGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSLMCTCFLCEP*GSTLILLQNGW Trigger: CCAGCCATTCTGGAGCAGGATAAGTGTTGATCCCAAGGGCTCGCATAGAAAACACGTGCACATTAAACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS TCA 72 bp | CATAGTGTCCACAACGAGTACTGGGAACTGGAAATCTaGGATCAGGATCAGGATGTAGCACAGTTGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: HSVHNEYWELEI*DQDQDVAQLGS Trigger: AGAACCCAACTGTGCTACATCCTGATCCTGATCTCAGATTTCCAGTTCCCAGTACTCGTTGTGGACACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS CAA 90 bp | ATTAGGATACTGAGTTTAATGTGCACGTGTTTTCTATGCGAGCCCTaGGGATCAACACTTATCCTGCTCCAGAATGGCTGGTCCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: IRILSLMCTCFLCEP*GSTLILLQNGWSFL Trigger: CAGAAAGGACCAGCCATTCTGGAGCAGGATAAGTGTTGATCCCAAGGGCTCGCATAGAAAACACGTGCACATTAAACTCAGTATCCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS GCA 72 bp | ATTAGGATACTGAGTTTAATGTGCACGTGTTTTCTATaGGAGCCCTTGGGATCAACACTTATCCTGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: IRILSLMCTCFL*EPLGSTLILLQ Trigger: CTGGAGCAGGATAAGTGTTGATCCCAAGGGCTCGCATAGAAAACACGTGCACATTAAACTCAGTATCCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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| CDS GCA 72 bp | ATAAATTTGAGACCCGGCTCAATAATGATTTTTCTCTaGAATGGTGGCAACTTTAATCTTCCCGAATTCCTA | + |
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Preference number: 6 (lower is better) Translates to: INLRPGSIMIFL*NGGNFNLPEFL Trigger: TAGGAATTCGGGAAGATTAAAGTTGCCACCATTGCAGAGAAAAATCATTATTGAGCCGGGTCTCAAATTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508563.1 |
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