Pregenerated sensors for LINC02380 (Homo sapiens)
Ensembl gene IDs: ENSG00000248505Ensembl transcript IDs: ENST00000510956.2, ENST00000658472.1, ENST00000661383.1, ENST00000664387.1, ENST00000664465.1, ENST00000667013.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGCTGGCAAGTCGGGCACCAGAGGGATCAACTCATGCACAAGGCTaGTGCAGCCTGCATAAAAGTGTGCAAGTAGACCTGGTTGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: GLASRAPEGSTHAQG*CSLHKSVQVDLVAK Trigger: CTTTGCAACCAGGTCTACTTGCACACTTTTATGCAGGCTGCAGCAGCCTTGTGCATGAGTTGATCCCTCTGGTGCCCGACTTGCCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS GCA 90 bp | CTGGCAAGTCGGGCACCAGAGGGATCAACTCATGCACAAGGCTGCTaGAGCCTGCATAAAAGTGTGCAAGTAGACCTGGTTGCAAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: LASRAPEGSTHAQGC*SLHKSVQVDLVAKD Trigger: GTCCTTTGCAACCAGGTCTACTTGCACACTTTTATGCAGGCTGCAGCAGCCTTGTGCATGAGTTGATCCCTCTGGTGCCCGACTTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS TCA 90 bp | ATTCTTCAGAAGCTGATCAAAATTCCCTGCCTCCCTCAGGGTAGCTaGGCCTCGGAACAGCGGGAGCACTGCGCCATCTTAAATACCCTG | + |
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Preference number: 5 (lower is better) Translates to: ILQKLIKIPCLPQGS*ASEQREHCAILNTL Trigger: CAGGGTATTTAAGATGGCGCAGTGCTCCCGCTGTTCCGAGGCTCAGCTACCCTGAGGGAGGCAGGGAATTTTGATCAGCTTCTGAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS TCA 90 bp | TTCCAAGATGTCCCTGAGGTCATGGGCACTCAGTCCAGCTCTTCTTaGCATGCCCTCATACAGTCAGACTTTAAGCCAAAACCCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: FQDVPEVMGTQSSSS*HALIQSDFKPKPWL Trigger: AAGCCAGGGTTTTGGCTTAAAGTCTGACTGTATGAGGGCATGTCAAGAAGAGCTGGACTGAGTGCCCATGACCTCAGGGACATCTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510956.2 |
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| CDS TCA 90 bp | AGTCAGGCAGGATCAAATGCTGCACAGTATCACACAGCGTGCTTGTaGTTCCATGGTATCAGAAATGCAGGGCTTGGACATTTGAGCATG | + |
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Preference number: 5 (lower is better) Translates to: SQAGSNAAQYHTACL*FHGIRNAGLGHLSM Trigger: CATGCTCAAATGTCCAAGCCCTGCATTTCTGATACCATGGAATCACAAGCACGCTGTGTGATACTGTGCAGCATTTGATCCTGCCTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510956.2 ENST00000664387.1 ENST00000664465.1 ENST00000667013.1 |
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| CDS CCA 90 bp | CTTTTCCATCTTCTACATATAGCTTCCAAGATGTCCCTGAGGTCATaGGCACTCAGTCCAGCTCTTCTTGACATGCCCTCATACAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: LFHLLHIASKMSLRS*ALSPALLDMPSYSQ Trigger: CTGACTGTATGAGGGCATGTCAAGAAGAGCTGGACTGAGTGCCCATGACCTCAGGGACATCTTGGAAGCTATATGTAGAAGATGGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000510956.2 ENST00000664465.1 |
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| CDS CCA 90 bp | CTTTTCCATCTTCTACATATAGCTTCCAAGATGTCCCTGAGGTCATaGGCACTCAGTCCAGCTGGCTTGTTCAACTCTGACACATGCACA | + |
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Preference number: 5 (lower is better) Translates to: LFHLLHIASKMSLRS*ALSPAGLFNSDTCT Trigger: TGTGCATGTGTCAGAGTTGAACAAGCCAGCTGGACTGAGTGCCCATGACCTCAGGGACATCTTGGAAGCTATATGTAGAAGATGGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658472.1 ENST00000664387.1 ENST00000667013.1 |
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| CDS TCA 90 bp | CTTCTGAACCTCAGGAGACTCATCAGAAACCCGAGCTCTGCCATTTaGTTTCTATTAATGCCATGTAAGTCTCTCCATCCCCGAGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: LLNLRRLIRNPSSAI*FLLMPCKSLHPRGN Trigger: ATTACCTCGGGGATGGAGAGACTTACATGGCATTAATAGAAATCAAATGGCAGAGCTCGGGTTTCTGATGAGTCTCCTGAGGTTCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000510956.2 ENST00000658472.1 ENST00000661383.1 ENST00000664387.1 ENST00000667013.1 |
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| CDS TCA 90 bp | GCTTTGAGATGGGACATCAGTCTTTTCCTGCCTTCAGACTCAAACTaGAATATTGGCTCTTCTTGGGTCTCCAGCTTGCCAACTGCATAT | + |
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Preference number: 5 (lower is better) Translates to: ALRWDISLFLPSDSN*NIGSSWVSSLPTAY Trigger: ATATGCAGTTGGCAAGCTGGAGACCCAAGAAGAGCCAATATTTCAGTTTGAGTCTGAAGGCAGGAAAAGACTGATGTCCCATCTCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664387.1 |
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| CDS TCA 90 bp | CAGGACCTCTTGGCCCATGGTGAGTTCACCTTGGACAGACTCCTTTaGAGAGATAAGCTATCTAGGATAAGAAGAGAACTTGCTGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: QDLLAHGEFTLDRLL*RDKLSRIRRELAGN Trigger: ATTTCCAGCAAGTTCTCTTCTTATCCTAGATAGCTTATCTCTTCAAAGGAGTCTGTCCAAGGTGAACTCACCATGGGCCAAGAGGTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS TCA 90 bp | ACTGGGGGAAATTTTTCAAACCAGTCATATGCTTCCACAGATGATTaGGATGTACTTCTCTCACCAGCTAAGAGCCACGGAGACAGACAG | + |
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Preference number: 5 (lower is better) Translates to: TGGNFSNQSYASTDD*DVLLSPAKSHGDRQ Trigger: CTGTCTGTCTCCGTGGCTCTTAGCTGGTGAGAGAAGTACATCTCAATCATCTGTGGAAGCATATGACTGGTTTGAAAAATTTCCCCCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000658472.1 |
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| CDS GCA 90 bp | TCTCCCGGGTTACGCCAGCCCATGCTCCTTTTTCATTCCAATTGCTaGATTTCTAGAGGATCATACTGCCATTTTTCTCTTCTCTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: SPGLRQPMLLFHSNC*ISRGSYCHFSLLCL Trigger: TAGACAGAGAAGAGAAAAATGGCAGTATGATCCTCTAGAAATGCAGCAATTGGAATGAAAAAGGAGCATGGGCTGGCGTAACCCGGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS CCA 90 bp | AGGATCAAATGCTGCACAGTATCACACAGCGTGCTTGTGATTCCATaGTATCAGAAATGCAGGGCTTGGACATTTGAGCATGAATGCTGT | + |
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Preference number: 5 (lower is better) Translates to: RIKCCTVSHSVLVIP*YQKCRAWTFEHECC Trigger: ACAGCATTCATGCTCAAATGTCCAAGCCCTGCATTTCTGATACCATGGAATCACAAGCACGCTGTGTGATACTGTGCAGCATTTGATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510956.2 ENST00000664387.1 ENST00000664465.1 ENST00000667013.1 |
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| CDS GCA 90 bp | TGCACAGTATCACACAGCGTGCTTGTGATTCCATGGTATCAGAAATaGAGGGCTTGGACATTTGAGCATGAATGCTGTCAGATTCAAACT | + |
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Preference number: 5 (lower is better) Translates to: CTVSHSVLVIPWYQK*RAWTFEHECCQIQT Trigger: AGTTTGAATCTGACAGCATTCATGCTCAAATGTCCAAGCCCTGCATTTCTGATACCATGGAATCACAAGCACGCTGTGTGATACTGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510956.2 ENST00000664387.1 ENST00000664465.1 ENST00000667013.1 |
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| CDS CCA 90 bp | GACACATGCACAGGGACTGCTCCTTGGACTAAAAGTCAAGAAATCTaGAAACTTCTGACTCCAACACAAATGAGCCATGTGACCTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: DTCTGTAPWTKSQEI*KLLTPTQMSHVTLN Trigger: ATTCAAGGTCACATGGCTCATTTGTGTTGGAGTCAGAAGTTTCCAGATTTCTTGACTTTTAGTCCAAGGAGCAGTCCCTGTGCATGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000510956.2 ENST00000658472.1 ENST00000661383.1 ENST00000664387.1 ENST00000667013.1 |
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| CDS GCA 90 bp | CTTCAGACTCAAACTGAAATATTGGCTCTTCTTGGGTCTCCAGCTTaGCAACTGCATATCTTAGGACATTCTATTGGCTGTTTCTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: LQTQTEILALLGSPA*QLHILGHSIGCFSR Trigger: TCTAGAGAAACAGCCAATAGAATGTCCTAAGATATGCAGTTGGCAAGCTGGAGACCCAAGAAGAGCCAATATTTCAGTTTGAGTCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664387.1 |
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| CDS CAA 72 bp | AGCCTCGGAACAGCGGGAGCACTGCGCCATCCTTCCTaGAGTGAGAACAAGAGGGAACTCCCTCTGCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SLGTAGALRHPS*SENKRELPLPD Trigger: GTCAGGCAGAGGGAGTTCCCTCTTGTTCTCACTCAAGGAAGGATGGCGCAGTGCTCCCGCTGTTCCGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510956.2 ENST00000658472.1 ENST00000664387.1 |
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| CDS TCA 72 bp | AAGCTGATCAAAATTCCCTGCCTCCCTCAGGGTAGCTaGGCCTCGGAACAGCGGGAGCACTGCGCCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: KLIKIPCLPQGS*ASEQREHCAIL Trigger: AAGGATGGCGCAGTGCTCCCGCTGTTCCGAGGCTCAGCTACCCTGAGGGAGGCAGGGAATTTTGATCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000510956.2 ENST00000658472.1 ENST00000664387.1 |
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| CDS TCA 72 bp | AAGCTGATCAAAATTCCCTGCCTCCCTCAGGGTAGCTaGGCCTCGGAACAGCGGGAGCACTGCGCCATCTTA | + |
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Preference number: 6 (lower is better) Translates to: KLIKIPCLPQGS*ASEQREHCAIL Trigger: TAAGATGGCGCAGTGCTCCCGCTGTTCCGAGGCTCAGCTACCCTGAGGGAGGCAGGGAATTTTGATCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS GCA 72 bp | CTTCCCACCCCTAAGCCCCAACATGTTAATCAGATGTaGAGTCCCAGAGGCAGGACCTCTTGGCCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPTPKPQHVNQM*SPRGRTSWPMV Trigger: CACCATGGGCCAAGAGGTCCTGCCTCTGGGACTGCACATCTGATTAACATGTTGGGGCTTAGGGGTGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS CAA 72 bp | ATGTCCCTGAGGTCATGGGCACTCAGTCCAGCTGGCTaGTTCAACTCTGACACATGCACAGGGACTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: MSLRSWALSPAG*FNSDTCTGTAP Trigger: AGGAGCAGTCCCTGTGCATGTGTCAGAGTTGAACAAGCCAGCTGGACTGAGTGCCCATGACCTCAGGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658472.1 ENST00000664387.1 ENST00000667013.1 |
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| CDS GCA 72 bp | AGTCGGGCACCAGAGGGATCAACTCATGCACAAGGCTaGTGCAGCCTGCATAAAAGTGTGCAAGTAGACCTG | + |
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Preference number: 6 (lower is better) Translates to: SRAPEGSTHAQG*CSLHKSVQVDL Trigger: CAGGTCTACTTGCACACTTTTATGCAGGCTGCAGCAGCCTTGTGCATGAGTTGATCCCTCTGGTGCCCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS CCA 72 bp | GTGCAAGTAGACCTGGTTGCAAAGGACAAGAGGGTGTaGGGCATCAACCCCTCCCATGACAACTTCCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: VQVDLVAKDKRV*GINPSHDNFQR Trigger: CCTTTGGAAGTTGTCATGGGAGGGGTTGATGCCCCACACCCTCTTGTCCTTTGCAACCAGGTCTACTTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS CAA 90 bp | GCTTCCAAGATGTCCCTGAGGTCATGGGCACTCAGTCCAGCTGGCTaGTTCAACTCTGACACATGCACAGGGACTGCTCCTTGGACTAAA | + |
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Preference number: 6 (lower is better) Translates to: ASKMSLRSWALSPAG*FNSDTCTGTAPWTK Trigger: TTTAGTCCAAGGAGCAGTCCCTGTGCATGTGTCAGAGTTGAACAAGCCAGCTGGACTGAGTGCCCATGACCTCAGGGACATCTTGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658472.1 ENST00000664387.1 ENST00000667013.1 |
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| CDS CAA 90 bp | TTTGACACAGTCTGGGAAGGCTCCTGCTCTCTAGGAGCTGGGCTTTaGCAAGAGATGCCTTCCTTGAGTGAGAACAAGAGGGAACTCCCT | + |
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Preference number: 6 (lower is better) Translates to: FDTVWEGSCSLGAGL*QEMPSLSENKRELP Trigger: AGGGAGTTCCCTCTTGTTCTCACTCAAGGAAGGCATCTCTTGCAAAAGCCCAGCTCCTAGAGAGCAGGAGCCTTCCCAGACTGTGTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667013.1 |
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| CDS CAA 72 bp | GTGAGAACAAGAGGGAACTCCCTCTGCCTGACTGCTTaGAGATGGGACATCAGTCTTTTCCTGCCTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: VRTRGNSLCLTA*RWDISLFLPSD Trigger: GTCTGAAGGCAGGAAAAGACTGATGTCCCATCTCAAAGCAGTCAGGCAGAGGGAGTTCCCTCTTGTTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000510956.2 ENST00000664387.1 ENST00000667013.1 |
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| CDS TCA 72 bp | GTCCCTGAGGTCATGGGCACTCAGTCCAGCTCTTCTTaGCATGCCCTCATACAGTCAGACTTTAAGCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: VPEVMGTQSSSS*HALIQSDFKPK Trigger: TTTTGGCTTAAAGTCTGACTGTATGAGGGCATGTCAAGAAGAGCTGGACTGAGTGCCCATGACCTCAGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000510956.2 ENST00000664465.1 |
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| CDS CCA 72 bp | CTTCTACATATAGCTTCCAAGATGTCCCTGAGGTCATaGGCACTCAGTCCAGCTCTTCTTGACATGCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LLHIASKMSLRS*ALSPALLDMPS Trigger: TGAGGGCATGTCAAGAAGAGCTGGACTGAGTGCCCATGACCTCAGGGACATCTTGGAAGCTATATGTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000510956.2 ENST00000664465.1 |
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| CDS CCA 72 bp | CTTCTACATATAGCTTCCAAGATGTCCCTGAGGTCATaGGCACTCAGTCCAGCTGGCTTGTTCAACTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLHIASKMSLRS*ALSPAGLFNSD Trigger: GTCAGAGTTGAACAAGCCAGCTGGACTGAGTGCCCATGACCTCAGGGACATCTTGGAAGCTATATGTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658472.1 ENST00000664387.1 ENST00000667013.1 |
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| CDS CCA 72 bp | AGAGGCAGGACCTCTTGGCCCATGGTGAGTTCACCTTaGACAGACTCCTTTGAAGAGATAAGCTATCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: RGRTSWPMVSSP*TDSFEEISYLG Trigger: TCCTAGATAGCTTATCTCTTCAAAGGAGTCTGTCCAAGGTGAACTCACCATGGGCCAAGAGGTCCTGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS CCA 72 bp | AAGGTTCCCACCCAAAGAAGGGCCCATCGGGATTACTaGGGGAAATTTTTCAAACCAGTCATATGCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: KVPTQRRAHRDY*GKFFKPVICFH Trigger: GTGGAAGCATATGACTGGTTTGAAAAATTTCCCCCAGTAATCCCGATGGGCCCTTCTTTGGGTGGGAACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658472.1 |
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| CDS TCA 72 bp | GGATCAAATGCTGCACAGTATCACACAGCGTGCTTGTaGTTCCATGGTATCAGAAATGCAGGGCTTGGACAT | + |
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Preference number: 6 (lower is better) Translates to: GSNAAQYHTACL*FHGIRNAGLGH Trigger: ATGTCCAAGCCCTGCATTTCTGATACCATGGAATCACAAGCACGCTGTGTGATACTGTGCAGCATTTGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510956.2 ENST00000664387.1 ENST00000664465.1 ENST00000667013.1 |
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| CDS TCA 72 bp | TGGGACATCAGTCTTTTCCTGCCTTCAGACTCAAACTaGAATATTGGCTCTTCTTGGGTCTCCAGCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: WDISLFLPSDSN*NIGSSWVSSLP Trigger: TGGCAAGCTGGAGACCCAAGAAGAGCCAATATTTCAGTTTGAGTCTGAAGGCAGGAAAAGACTGATGTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664387.1 |
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| CDS GCA 72 bp | TCACACAGCGTGCTTGTGATTCCATGGTATCAGAAATaGAGGGCTTGGACATTTGAGCATGAATGCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SHSVLVIPWYQK*RAWTFEHECCQ Trigger: CTGACAGCATTCATGCTCAAATGTCCAAGCCCTGCATTTCTGATACCATGGAATCACAAGCACGCTGTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510956.2 ENST00000664387.1 ENST00000664465.1 ENST00000667013.1 |
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| CDS CCA 72 bp | TGCTGCACAGTATCACACAGCGTGCTTGTGATTCCATaGTATCAGAAATGCAGGGCTTGGACATTTGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: CCTVSHSVLVIP*YQKCRAWTFEH Trigger: ATGCTCAAATGTCCAAGCCCTGCATTTCTGATACCATGGAATCACAAGCACGCTGTGTGATACTGTGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510956.2 ENST00000664387.1 ENST00000664465.1 ENST00000667013.1 |
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| CDS CAA 90 bp | GAAATCTGGAAACTTCTGACTCCAACACAAATGAGCCATGTGACCTaGAATGTGTCATCTCACCCTTCTGAACCTCAGGAGACTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: EIWKLLTPTQMSHVT*NVSSHPSEPQETHQ Trigger: CTGATGAGTCTCCTGAGGTTCAGAAGGGTGAGATGACACATTCAAGGTCACATGGCTCATTTGTGTTGGAGTCAGAAGTTTCCAGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000510956.2 ENST00000658472.1 ENST00000661383.1 ENST00000664387.1 ENST00000667013.1 |
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| CDS CAA 90 bp | GATGGGACATCAGTCTTTTCCTGCCTTCAGACTCAAACTGAAATATaGGCTCTTCTTGGGTCTCCAGCTTGCCAACTGCATATCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: DGTSVFSCLQTQTEI*ALLGSPACQLHILG Trigger: TCCTAAGATATGCAGTTGGCAAGCTGGAGACCCAAGAAGAGCCAATATTTCAGTTTGAGTCTGAAGGCAGGAAAAGACTGATGTCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664387.1 |
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| CDS CCA 72 bp | CAGTCTTTTCCTGCCTTCAGACTCAAACTGAAATATTaGCTCTTCTTGGGTCTCCAGCTTGCCAACTGCATA | + |
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Preference number: 6 (lower is better) Translates to: QSFPAFRLKLKY*LFLGLQLANCI Trigger: TATGCAGTTGGCAAGCTGGAGACCCAAGAAGAGCCAATATTTCAGTTTGAGTCTGAAGGCAGGAAAAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664387.1 |
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| CDS CAA 72 bp | AAACTTCTGACTCCAACACAAATGAGCCATGTGACCTaGAATGTGTCATCTCACCCTTCTGAACCTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KLLTPTQMSHVT*NVSSHPSEPQE Trigger: CTCCTGAGGTTCAGAAGGGTGAGATGACACATTCAAGGTCACATGGCTCATTTGTGTTGGAGTCAGAAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000510956.2 ENST00000658472.1 ENST00000661383.1 ENST00000664387.1 ENST00000667013.1 |
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| CDS CAA 72 bp | TCAGTCTTTTCCTGCCTTCAGACTCAAACTGAAATATaGGCTCTTCTTGGGTCTCCAGCTTGCCAACTGCAT | + |
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Preference number: 6 (lower is better) Translates to: SVFSCLQTQTEI*ALLGSPACQLH Trigger: ATGCAGTTGGCAAGCTGGAGACCCAAGAAGAGCCAATATTTCAGTTTGAGTCTGAAGGCAGGAAAAGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664387.1 |
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| CDS CCA 72 bp | ACAGGGACTGCTCCTTGGACTAAAAGTCAAGAAATCTaGAAACTTCTGACTCCAACACAAATGAGCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: TGTAPWTKSQEI*KLLTPTQMSHV Trigger: CACATGGCTCATTTGTGTTGGAGTCAGAAGTTTCCAGATTTCTTGACTTTTAGTCCAAGGAGCAGTCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000510956.2 ENST00000658472.1 ENST00000661383.1 ENST00000664387.1 ENST00000667013.1 |
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| CDS TCA 72 bp | TTGGCCCATGGTGAGTTCACCTTGGACAGACTCCTTTaGAGAGATAAGCTATCTAGGATAAGAAGAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: LAHGEFTLDRLL*RDKLSRIRREL Trigger: AAGTTCTCTTCTTATCCTAGATAGCTTATCTCTTCAAAGGAGTCTGTCCAAGGTGAACTCACCATGGGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS GCA 72 bp | CAAACTGAAATATTGGCTCTTCTTGGGTCTCCAGCTTaGCAACTGCATATCTTAGGACATTCTATTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: QTEILALLGSPA*QLHILGHSIGC Trigger: ACAGCCAATAGAATGTCCTAAGATATGCAGTTGGCAAGCTGGAGACCCAAGAAGAGCCAATATTTCAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664387.1 |
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| CDS TCA 72 bp | AATTTTTCAAACCAGTCATATGCTTCCACAGATGATTaGGATGTACTTCTCTCACCAGCTAAGAGCCACGGA | + |
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Preference number: 6 (lower is better) Translates to: NFSNQSYASTDD*DVLLSPAKSHG Trigger: TCCGTGGCTCTTAGCTGGTGAGAGAAGTACATCTCAATCATCTGTGGAAGCATATGACTGGTTTGAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658472.1 |
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| CDS GCA 72 bp | TTACGCCAGCCCATGCTCCTTTTTCATTCCAATTGCTaGATTTCTAGAGGATCATACTGCCATTTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LRQPMLLFHSNC*ISRGSYCHFSL Trigger: AAGAGAAAAATGGCAGTATGATCCTCTAGAAATGCAGCAATTGGAATGAAAAAGGAGCATGGGCTGGCGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS CAA 90 bp | GATTCATCTGAGCTGGGCATGATTCAGCTACTCAAGATATTGAATTaGGGAAATATGTGTGTCTTCAGACTTTTTCCTCTCTCTGTATGG | + |
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Preference number: 6 (lower is better) Translates to: DSSELGMIQLLKILN*GNMCVFRLFPLSVW Trigger: CCATACAGAGAGAGGAAAAAGTCTGAAGACACACATATTTCCCAAATTCAATATCTTGAGTAGCTGAATCATGCCCAGCTCAGATGAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661383.1 |
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| CDS GCA 72 bp | GTCAGATTCAAACTTCACTATGAAGGTCAACCATGTTaGTATAGAAAAACAAGATCCACTTTTGCTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: VRFKLHYEGQPC*YRKTRSTFAPT Trigger: GGTGGGAGCAAAAGTGGATCTTGTTTTTCTATAGCAACATGGTTGACCTTCATAGTGAAGTTTGAATCTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000510956.2 ENST00000664387.1 ENST00000664465.1 ENST00000667013.1 |
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| CDS CAA 72 bp | GCTGTCCCTTTTCTAAGTAGTTATTTGGAGATTAAATaGATGGAGATGACAGAGGCTTTTCCATCTTCTACA | + |
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Preference number: 6 (lower is better) Translates to: AVPFLSSYLEIK*MEMTEAFPSST Trigger: TGTAGAAGATGGAAAAGCCTCTGTCATCTCCATCAATTTAATCTCCAAATAACTACTTAGAAAAGGGACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000510956.2 ENST00000658472.1 ENST00000664387.1 ENST00000664465.1 ENST00000667013.1 |
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