RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02376 (Homo sapiens)

Ensembl gene IDs: ENSG00000256292

Ensembl transcript IDs: ENST00000536330.1, ENST00000660334.1

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TTCAGGCACCACCACAGACTTGGTCATCTCCAGAAGGAGCTGAAGTaGAGAAGCCGGCAGCCAGCAGTCCCTCCATGGGGCCAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: FRHHHRLGHLQKELK*RSRQPAVPPWGQRL
Trigger: GAGCCTTTGGCCCCATGGAGGGACTGCTGGCTGCCGGCTTCTTCACTTCAGCTCCTTCTGGAGATGACCAAGTCTGTGGTGGTGCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536330.1
ENST00000660334.1
CDS CCA 90 bp CAGATGTGGTCTCAGCCCTCAGGGCTTCATACTACCATTGTCCACTaGCTAGAACGCAGTCACATGACAACACCTAGCCACAAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: QMWSQPSGLHTTIVH*LERSHMTTPSHKGG
Trigger: GCCTCCTTTGTGGCTAGGTGTTGTCATGTGACTGCGTTCTAGCCAGTGGACAATGGTAGTATGAAGCCCTGAGGGCTGAGACCACATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS CCA 90 bp TTTGTCCTGATGAACCATCATCTCCCCATGAAACCCAGCATGACCTaGGCCTTGCTTAAATCTTCAGGCACCACCACAGACTTGGTCATC +
Preference number: 5 (lower is better)
Translates to: FVLMNHHLPMKPSMT*ALLKSSGTTTDLVI
Trigger: GATGACCAAGTCTGTGGTGGTGCCTGAAGATTTAAGCAAGGCCCAGGTCATGCTGGGTTTCATGGGGAGATGATGGTTCATCAGGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536330.1
CDS CCA 90 bp CAAACAACGCAATACCATCATCTCCCCATGAAACCCAGCATGACCTaGGCCTTGCTTAAATCTTCAGGCACCACCACAGACTTGGTCATC +
Preference number: 5 (lower is better)
Translates to: QTTQYHHLPMKPSMT*ALLKSSGTTTDLVI
Trigger: GATGACCAAGTCTGTGGTGGTGCCTGAAGATTTAAGCAAGGCCCAGGTCATGCTGGGTTTCATGGGGAGATGATGGTATTGCGTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS CCA 90 bp TGGCTAGAACGCAGTCACATGACAACACCTAGCCACAAAGGAGGCTaGGAAATGAAGTCCACCTTAGCAGCAGACATCAATTCCTTTAAA +
Preference number: 5 (lower is better)
Translates to: WLERSHMTTPSHKGG*EMKSTLAADINSFK
Trigger: TTTAAAGGAATTGATGTCTGCTGCTAAGGTGGACTTCATTTCCCAGCCTCCTTTGTGGCTAGGTGTTGTCATGTGACTGCGTTCTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS GCA 90 bp CCTCCTTCCTTTGCATTTATCCAGTTCCTAGCAGAGAAAATTGTTTaGCGGAGTAATGTTCATCAGCTGCTACTCTTCGAAGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PPSFAFIQFLAEKIV*RSNVHQLLLFEEPV
Trigger: CACTGGCTCTTCGAAGAGTAGCAGCTGATGAACATTACTCCGGCAAACAATTTTCTCTGCTAGGAACTGGATAAATGCAAAGGAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536330.1
ENST00000660334.1
CDS CCA 90 bp GCTGTAGACAGGGATCAGATCTGTCATTCTCTGTCATGTGTGACTTaGCCTATGCTTGTGGATGTGGCTTTACTAGGTTCATTGAGATTG +
Preference number: 5 (lower is better)
Translates to: AVDRDQICHSLSCVT*PMLVDVALLGSLRL
Trigger: CAATCTCAATGAACCTAGTAAAGCCACATCCACAAGCATAGGCCAAGTCACACATGACAGAGAATGACAGATCTGATCCCTGTCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536330.1
ENST00000660334.1
CDS GCA 72 bp GGCAGCCAGCAGTCCCTCCATGGGGCCAAAGGCTCTTaGAGCTCCACCCCGGTTGCCAGTGCCCTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: GSQQSLHGAKGS*SSTPVASALLR
Trigger: CCTGAGCAGGGCACTGGCAACCGGGGTGGAGCTGCAAGAGCCTTTGGCCCCATGGAGGGACTGCTGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS CAA 72 bp CGGCAGCCAGCAGTCCCTCCATGGGGCCAAAGGCTCTaGCAGCTCCACCCCGGTTGCCAGTGCCCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: RQPAVPPWGQRL*QLHPGCQCPAQ
Trigger: CTGAGCAGGGCACTGGCAACCGGGGTGGAGCTGCAAGAGCCTTTGGCCCCATGGAGGGACTGCTGGCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS CCA 72 bp TCTCAGCCCTCAGGGCTTCATACTACCATTGTCCACTaGCTAGAACGCAGTCACATGACAACACCTAGCCAC +
Preference number: 6 (lower is better)
Translates to: SQPSGLHTTIVH*LERSHMTTPSH
Trigger: GTGGCTAGGTGTTGTCATGTGACTGCGTTCTAGCCAGTGGACAATGGTAGTATGAAGCCCTGAGGGCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS CAA 72 bp CATCATCTCCCCATGAAACCCAGCATGACCTGGGCCTaGCTTAAATCTTCAGGCACCACCACAGACTTGGTC +
Preference number: 6 (lower is better)
Translates to: HHLPMKPSMTWA*LKSSGTTTDLV
Trigger: GACCAAGTCTGTGGTGGTGCCTGAAGATTTAAGCAAGGCCCAGGTCATGCTGGGTTTCATGGGGAGATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536330.1
ENST00000660334.1
CDS CAA 90 bp CTGATGAACCATCATCTCCCCATGAAACCCAGCATGACCTGGGCCTaGCTTAAATCTTCAGGCACCACCACAGACTTGGTCATCTCCAGA +
Preference number: 6 (lower is better)
Translates to: LMNHHLPMKPSMTWA*LKSSGTTTDLVISR
Trigger: TCTGGAGATGACCAAGTCTGTGGTGGTGCCTGAAGATTTAAGCAAGGCCCAGGTCATGCTGGGTTTCATGGGGAGATGATGGTTCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536330.1
CDS CAA 90 bp ACGCAATACCATCATCTCCCCATGAAACCCAGCATGACCTGGGCCTaGCTTAAATCTTCAGGCACCACCACAGACTTGGTCATCTCCAGA +
Preference number: 6 (lower is better)
Translates to: TQYHHLPMKPSMTWA*LKSSGTTTDLVISR
Trigger: TCTGGAGATGACCAAGTCTGTGGTGGTGCCTGAAGATTTAAGCAAGGCCCAGGTCATGCTGGGTTTCATGGGGAGATGATGGTATTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS CCA 72 bp ATGAACCATCATCTCCCCATGAAACCCAGCATGACCTaGGCCTTGCTTAAATCTTCAGGCACCACCACAGAC +
Preference number: 6 (lower is better)
Translates to: MNHHLPMKPSMT*ALLKSSGTTTD
Trigger: GTCTGTGGTGGTGCCTGAAGATTTAAGCAAGGCCCAGGTCATGCTGGGTTTCATGGGGAGATGATGGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536330.1
CDS CCA 72 bp CAATACCATCATCTCCCCATGAAACCCAGCATGACCTaGGCCTTGCTTAAATCTTCAGGCACCACCACAGAC +
Preference number: 6 (lower is better)
Translates to: QYHHLPMKPSMT*ALLKSSGTTTD
Trigger: GTCTGTGGTGGTGCCTGAAGATTTAAGCAAGGCCCAGGTCATGCTGGGTTTCATGGGGAGATGATGGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS CCA 72 bp CGCAGTCACATGACAACACCTAGCCACAAAGGAGGCTaGGAAATGAAGTCCACCTTAGCAGCAGACATCAAT +
Preference number: 6 (lower is better)
Translates to: RSHMTTPSHKGG*EMKSTLAADIN
Trigger: ATTGATGTCTGCTGCTAAGGTGGACTTCATTTCCCAGCCTCCTTTGTGGCTAGGTGTTGTCATGTGACTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS CAA 90 bp GGCTGTAGACAGGGATCAGATCTGTCATTCTCTGTCATGTGTGACTaGGCCTATGCTTGTGGATGTGGCTTTACTAGGTTCATTGAGATT +
Preference number: 6 (lower is better)
Translates to: GCRQGSDLSFSVMCD*AYACGCGFTRFIEI
Trigger: AATCTCAATGAACCTAGTAAAGCCACATCCACAAGCATAGGCCAAGTCACACATGACAGAGAATGACAGATCTGATCCCTGTCTACAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536330.1
ENST00000660334.1
CDS TCA 72 bp CTTCATTTCCCCTCTTCACATCCTGCTTGCTTATTATaGAAACAAACAACGCAATACCATCATCTCCCCATG +
Preference number: 6 (lower is better)
Translates to: LHFPSSHPACLL*KQTTQYHHLPM
Trigger: CATGGGGAGATGATGGTATTGCGTTGTTTGTTTTCATAATAAGCAAGCAGGATGTGAAGAGGGGAAATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660334.1
CDS GCA 72 bp TTTGCATTTATCCAGTTCCTAGCAGAGAAAATTGTTTaGCGGAGTAATGTTCATCAGCTGCTACTCTTCGAA +
Preference number: 6 (lower is better)
Translates to: FAFIQFLAEKIV*RSNVHQLLLFE
Trigger: TTCGAAGAGTAGCAGCTGATGAACATTACTCCGGCAAACAATTTTCTCTGCTAGGAACTGGATAAATGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536330.1
ENST00000660334.1