Pregenerated sensors for LINC02373 (Homo sapiens)
Ensembl gene IDs: ENSG00000257507Ensembl transcript IDs: ENST00000549261.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TATTGGCTCACACTTCTGGAGGCTGGGAAGTCCAAGATTGAAAAGTaGATCTTGCCAGGGCCTTCTTGCTGCATCATCCCATGGTGGACA | + |
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Preference number: 5 (lower is better) Translates to: YWLTLLEAGKSKIEK*ILPGPSCCIIPWWT Trigger: TGTCCACCATGGGATGATGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTTGGACTTCCCAGCCTCCAGAAGTGTGAGCCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS TCA 90 bp | AGAGATTTATTGGCTCACACTTCTGGAGGCTGGGAAGTCCAAGATTaGAAAGTGCATCTTGCCAGGGCCTTCTTGCTGCATCATCCCATG | + |
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Preference number: 5 (lower is better) Translates to: RDLLAHTSGGWEVQD*KVHLARAFLLHHPM Trigger: CATGGGATGATGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTTGGACTTCCCAGCCTCCAGAAGTGTGAGCCAATAAATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS CCA 90 bp | AATGACATAGAACAGAACCCTCAGAGATTTATTGGCTCACACTTCTaGAGGCTGGGAAGTCCAAGATTGAAAAGTGCATCTTGCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: NDIEQNPQRFIGSHF*RLGSPRLKSASCQG Trigger: GCCCTGGCAAGATGCACTTTTCAATCTTGGACTTCCCAGCCTCCAGAAGTGTGAGCCAATAAATCTCTGAGGGTTCTGTTCTATGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS TCA 90 bp | TCATCCAGTCCCAAGGATTTAAATACTGTCTATATGTTAACCACTTaGTGGCCTTCATGTATAGAGGCCGGTGTTCATGTTGCCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SSSPKDLNTVYMLTT*WPSCIEAGVHVAVL Trigger: CAGGACGGCAACATGAACACCGGCCTCTATACATGAAGGCCATCAAGTGGTTAACATATAGACAGTATTTAAATCCTTGGGACTGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS CCA 72 bp | TGCATCTTGCCAGGGCCTTCTTGCTGCATCATCCCATaGTGGACAGCATCCCATGGCAGAAGGGCAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: CILPGPSCCIIP*WTASHGRRAKR Trigger: TCTCTTTGCCCTTCTGCCATGGGATGCTGTCCACCATGGGATGATGCAGCAAGAAGGCCCTGGCAAGATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS CAA 72 bp | CTGGAGGCTGGGAAGTCCAAGATTGAAAAGTGCATCTaGCCAGGGCCTTCTTGCTGCATCATCCCATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LEAGKSKIEKCI*PGPSCCIIPWW Trigger: CCACCATGGGATGATGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTTGGACTTCCCAGCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS CAA 90 bp | CTCACACTTCTGGAGGCTGGGAAGTCCAAGATTGAAAAGTGCATCTaGCCAGGGCCTTCTTGCTGCATCATCCCATGGTGGACAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LTLLEAGKSKIEKCI*PGPSCCIIPWWTAS Trigger: GGATGCTGTCCACCATGGGATGATGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTTGGACTTCCCAGCCTCCAGAAGTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS GCA 72 bp | TCCAAGATTGAAAAGTGCATCTTGCCAGGGCCTTCTTaGTGCATCATCCCATGGTGGACAGCATCCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: SKIEKCILPGPS*CIIPWWTASHG Trigger: GCCATGGGATGCTGTCCACCATGGGATGATGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS TCA 72 bp | TTGGCTCACACTTCTGGAGGCTGGGAAGTCCAAGATTaGAAAGTGCATCTTGCCAGGGCCTTCTTGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LAHTSGGWEVQD*KVHLARAFLLH Trigger: ATGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTTGGACTTCCCAGCCTCCAGAAGTGTGAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS GCA 72 bp | AAGATTGAAAAGTGCATCTTGCCAGGGCCTTCTTGCTaGATCATCCCATGGTGGACAGCATCCCATGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KIEKCILPGPSC*IIPWWTASHGR Trigger: TCTGCCATGGGATGCTGTCCACCATGGGATGATGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS GCA 72 bp | ACACTTCTGGAGGCTGGGAAGTCCAAGATTGAAAAGTaGATCTTGCCAGGGCCTTCTTGCTGCATCATCCCA | + |
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Preference number: 6 (lower is better) Translates to: TLLEAGKSKIEK*ILPGPSCCIIP Trigger: TGGGATGATGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTTGGACTTCCCAGCCTCCAGAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS CCA 72 bp | TTCTTGCTGCATCATCCCATGGTGGACAGCATCCCATaGCAGAAGGGCAAAGAGAGGGTGAGAGAGACAAAA | + |
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Preference number: 6 (lower is better) Translates to: FLLHHPMVDSIP*QKGKERVRETK Trigger: TTTTGTCTCTCTCACCCTCTCTTTGCCCTTCTGCCATGGGATGCTGTCCACCATGGGATGATGCAGCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS CAA 72 bp | ATTGGCTCACACTTCTGGAGGCTGGGAAGTCCAAGATaGAAAAGTGCATCTTGCCAGGGCCTTCTTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: IGSHFWRLGSPR*KSASCQGLLAA Trigger: TGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTTGGACTTCCCAGCCTCCAGAAGTGTGAGCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS CAA 90 bp | CAGAGATTTATTGGCTCACACTTCTGGAGGCTGGGAAGTCCAAGATaGAAAAGTGCATCTTGCCAGGGCCTTCTTGCTGCATCATCCCAT | + |
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Preference number: 6 (lower is better) Translates to: QRFIGSHFWRLGSPR*KSASCQGLLAASSH Trigger: ATGGGATGATGCAGCAAGAAGGCCCTGGCAAGATGCACTTTTCAATCTTGGACTTCCCAGCCTCCAGAAGTGTGAGCCAATAAATCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS CAA 90 bp | CTCATCCAGTCCCAAGGATTTAAATACTGTCTATATGTTAACCACTaGATGGCCTTCATGTATAGAGGCCGGTGTTCATGTTGCCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LIQSQGFKYCLYVNH*MAFMYRGRCSCCRP Trigger: AGGACGGCAACATGAACACCGGCCTCTATACATGAAGGCCATCAAGTGGTTAACATATAGACAGTATTTAAATCCTTGGGACTGGATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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| CDS TCA 72 bp | CCCAAGGATTTAAATACTGTCTATATGTTAACCACTTaGTGGCCTTCATGTATAGAGGCCGGTGTTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: PKDLNTVYMLTT*WPSCIEAGVHV Trigger: AACATGAACACCGGCCTCTATACATGAAGGCCATCAAGTGGTTAACATATAGACAGTATTTAAATCCTTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549261.1 |
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