Pregenerated sensors for LINC02372 (Homo sapiens)
Ensembl gene IDs: ENSG00000249873Ensembl transcript IDs: ENST00000507482.7, ENST00000541348.2, ENST00000544727.2, ENST00000654468.1, ENST00000667878.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCAGCAGGTGCCTGGCGTGGCCTTTGCGCCCCCTGCTGGTCGTTCTaGCAGCACACAGCCTCCTGCCTTGCCAGTGTGAAACCCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAGAWRGLCAPCWSF*QHTASCLASVKPGA Trigger: AGCACCGGGTTTCACACTGGCAAGGCAGGAGGCTGTGTGCTGCCAGAACGACCAGCAGGGGGCGCAAAGGCCACGCCAGGCACCTGCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 90 bp | TTGCGCCCCCTGCTGGTCGTTCTGGCAGCACACAGCCTCCTGCCTTaGCAGTGTGAAACCCGGTGCTGTCTTGTTCCCCGGGTGGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LRPLLVVLAAHSLLP*QCETRCCLVPRVEC Trigger: GCATTCCACCCGGGGAACAAGACAGCACCGGGTTTCACACTGGCAAGGCAGGAGGCTGTGTGCTGCCAGAACGACCAGCAGGGGGCGCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000507482.7 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 90 bp | AAAGATACTTCATGGGTCCTCTACTGCCGACTGTCTGGGCTGCAGTaGCCTGGCACATTTCCTTGCAGAGAAAGGACAGCAGGAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KDTSWVLYCRLSGLQ*PGTFPCRERTAGVG Trigger: GCCCACTCCTGCTGTCCTTTCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGTATCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000507482.7 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 90 bp | TGCACAAAGATACTTCATGGGTCCTCTACTGCCGACTGTCTGGGCTaGAGTGCCCTGGCACATTTCCTTGCAGAGAAAGGACAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CTKILHGSSTADCLG*SALAHFLAEKGQQE Trigger: CTCCTGCTGTCCTTTCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGTATCTTTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000507482.7 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 90 bp | AGTGATAATGACCTTCATGGGTCCTCTACTGCCGACTGTCTGGGCTaGAGTGCCCTGGCACATTTCCTTGCAGAGAAAGGACAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SDNDLHGSSTADCLG*SALAHFLAEKGQQE Trigger: CTCCTGCTGTCCTTTCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGGTCATTATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541348.2 |
||
| CDS CCA 90 bp | AAAGCAGTGATAATGACCTTCATGGGTCCTCTACTGCCGACTGTCTaGGCTGCAGTGCCCTGGCACATTTCCTTGCAGAGAAAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: KAVIMTFMGPLLPTV*AAVPWHISLQRKDS Trigger: GCTGTCCTTTCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGGTCATTATCACTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541348.2 |
||
| CDS CCA 90 bp | TTCTTTGCACAAAGATACTTCATGGGTCCTCTACTGCCGACTGTCTaGGCTGCAGTGCCCTGGCACATTTCCTTGCAGAGAAAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFAQRYFMGPLLPTV*AAVPWHISLQRKDS Trigger: GCTGTCCTTTCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGTATCTTTGTGCAAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000507482.7 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CCA 90 bp | TCCTGCCTTGCCAGTGTGAAACCCGGTGCTGTCTTGTTCCCCGGGTaGAATGCAAGAGAATGCTTGGGAAGAACTTTGTTACCCAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: SCLASVKPGAVLFPG*NARECLGRTLLPNE Trigger: TTCATTGGGTAACAAAGTTCTTCCCAAGCATTCTCTTGCATTCCACCCGGGGAACAAGACAGCACCGGGTTTCACACTGGCAAGGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654468.1 |
||
| CDS TCA 90 bp | GTTTCTGCCACTGCTGCTTTTCAAAGGATTTGGTGGAGAAGAAGCTaGAAACCCACCACAATACCAAGCCACACAGGTAAGTTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSATAAFQRIWWRRS*KPTTIPSHTGKFTC Trigger: GCAGGTGAACTTACCTGTGTGGCTTGGTATTGTGGTGGGTTTTCAGCTTCTTCTCCACCAAATCCTTTGAAAAGCAGCAGTGGCAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 90 bp | GAAGTAAGAGAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATaGTGGGCTTCTGCTCCTAGGTTTCCAGCTGATATCTGCATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EVREESTHPGFQRSL*WASAPRFPADICIV Trigger: GACAATGCAGATATCAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTCTCTTACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654468.1 |
||
| CDS CCA 90 bp | GTAAGAGAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATGCTaGGCTTCTGCTCCTAGGTTTCCAGCTGATATCTGCATTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VREESTHPGFQRSLC*ASAPRFPADICIVC Trigger: ACAGACAATGCAGATATCAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTCTCTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654468.1 |
||
| CDS GCA 90 bp | GAAGTAAGAGAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATaGTGGGCTTCTGCTCCTAGGTTTCCAGGTCTTAATTTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVREESTHPGFQRSL*WASAPRFPGLNFLS Trigger: GGACAAGAAATTAAGACCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTCTCTTACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507482.7 |
||
| CDS CCA 90 bp | GTAAGAGAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATGCTaGGCTTCTGCTCCTAGGTTTCCAGGTCTTAATTTCTTGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VREESTHPGFQRSLC*ASAPRFPGLNFLSM Trigger: CATGGACAAGAAATTAAGACCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTCTCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507482.7 |
||
| CDS CCA 90 bp | AGATCTGTGCATCATGCTGATATTCACATTTCCACCCCACCGTTTTaGGAAGTAAGAGAGGAATCCACGCATCCAGGCTTTCAGAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RSVHHADIHISTPPF*EVREESTHPGFQRS Trigger: AGATCTCTGAAAGCCTGGATGCGTGGATTCCTCTCTTACTTCCCAAAACGGTGGGGTGGAAATGTGAATATCAGCATGATGCACAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CCA 90 bp | GTAAGAGAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATGCTaGGCTTCTGCTCCTAGGTTTCCAGCTGCTTTTTACATATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VREESTHPGFQRSLC*ASAPRFPAAFYISA Trigger: TGCAGATATGTAAAAAGCAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTCTCTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541348.2 ENST00000667878.1 |
||
| CDS TCA 90 bp | AGAAATTCAGTTCGCTGGACATCTGCAGAGATCTGTGCATCATGCTaGTATTCACATTTCCACCCCACCGTTTTGGGAAGTAAGAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RNSVRWTSAEICASC*YSHFHPTVLGSKRG Trigger: TCCTCTCTTACTTCCCAAAACGGTGGGGTGGAAATGTGAATATCAGCATGATGCACAGATCTCTGCAGATGTCCAGCGAACTGAATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 90 bp | GAAGTAAGAGAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATaGTGGGCTTCTGCTCCTAGGTTTCCAGCTTTTTACATATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EVREESTHPGFQRSL*WASAPRFPAFYISA Trigger: TGCAGATATGTAAAAAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTCTCTTACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000544727.2 |
||
| CDS GCA 90 bp | GAAGTAAGAGAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATaGTGGGCTTCTGCTCCTAGGTTTCCAGCTGCTTTTTACATATCT | + |
|
Preference number: 5 (lower is better) Translates to: EVREESTHPGFQRSL*WASAPRFPAAFYIS Trigger: AGATATGTAAAAAGCAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTCTCTTACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541348.2 ENST00000667878.1 |
||
| CDS CCA 90 bp | GTAAGAGAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATGCTaGGCTTCTGCTCCTAGGTTTCCAGCTTTTTACATATCTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VREESTHPGFQRSLC*ASAPRFPAFYISAL Trigger: CAATGCAGATATGTAAAAAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTCTCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000544727.2 |
||
| CDS CCA 90 bp | TTAAAGCAACATTTAAAGCACGGTATTTCCCATGTTGTGGATGCTTaGTGTGCTGAAGACAGCTCAGGGTACTGCATGCAAAGGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKQHLKHGISHVVDA*CAEDSSGYCMQRWF Trigger: AAACCACCTTTGCATGCAGTACCCTGAGCTGTCTTCAGCACACCAAGCATCCACAACATGGGAAATACCGTGCTTTAAATGTTGCTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS TCA 90 bp | AGTCTTCTTCACCCACTCAGTATCTCCGTTAACAGATACTGGGTGTaGCTTCATTTTGTGGGAGTGTTTTCATGGATAAGAGACAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLLHPLSISVNRYWV*LHFVGVFSWIRDRT Trigger: TGTCCTGTCTCTTATCCATGAAAACACTCCCACAAAATGAAGTCACACCCAGTATCTGTTAACGGAGATACTGAGTGGGTGAAGAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS TCA 90 bp | TGGAAGACTCTTAGGTACGTGTGTTCAGCCAGATTTCTATGTGTATaGACATCACAACCAAAACCCACATTCCCCTTGGAACTCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WKTLRYVCSARFLCV*TSQPKPTFPLELIK Trigger: TTTGATGAGTTCCAAGGGGAATGTGGGTTTTGGTTGTGATGTTCATACACATAGAAATCTGGCTGAACACACGTACCTAAGAGTCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654468.1 ENST00000667878.1 |
||
| CDS CCA 72 bp | CCAGCAGGTGCCTGGCGTGGCCTTTGCGCCCCCTGCTaGTCGTTCTGGCAGCACACAGCCTCCTGCCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PAGAWRGLCAPC*SFWQHTASCLA Trigger: GGCAAGGCAGGAGGCTGTGTGCTGCCAGAACGACCAGCAGGGGGCGCAAAGGCCACGCCAGGCACCTGCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | AGGCCAGCAGGTGCCTGGCGTGGCCTTTGCGCCCCCTaGTGGTCGTTCTGGCAGCACACAGCCTCCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RPAGAWRGLCAP*WSFWQHTASCL Trigger: AAGGCAGGAGGCTGTGTGCTGCCAGAACGACCAGCAGGGGGCGCAAAGGCCACGCCAGGCACCTGCTGGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CCA 72 bp | GCCTGGCGTGGCCTTTGCGCCCCCTGCTGGTCGTTCTaGCAGCACACAGCCTCCTGCCTTGCCAGTGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AWRGLCAPCWSF*QHTASCLASVK Trigger: TTTCACACTGGCAAGGCAGGAGGCTGTGTGCTGCCAGAACGACCAGCAGGGGGCGCAAAGGCCACGCCAGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CAA 72 bp | GTTTTCTCTGAGGCCAGCAGGTGCCTGGCGTGGCCTTaGCGCCCCCTGCTGGTCGTTCTGGCAGCACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VFSEASRCLAWP*RPLLVVLAAHS Trigger: GCTGTGTGCTGCCAGAACGACCAGCAGGGGGCGCAAAGGCCACGCCAGGCACCTGCTGGCCTCAGAGAAAAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | CTGCTGGTCGTTCTGGCAGCACACAGCCTCCTGCCTTaGCAGTGTGAAACCCGGTGCTGTCTTGTTCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLVVLAAHSLLP*QCETRCCLVPR Trigger: CCGGGGAACAAGACAGCACCGGGTTTCACACTGGCAAGGCAGGAGGCTGTGTGCTGCCAGAACGACCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000507482.7 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CAA 72 bp | CCGACTGTCTGGGCTGCAGTGCCCTGGCACATTTCCTaGCAGAGAAAGGACAGCAGGAGTGGGCTTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PTVWAAVPWHIS*QRKDSRSGLPG Trigger: ACCAGGAAGCCCACTCCTGCTGTCCTTTCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CAA 90 bp | CCTCTACTGCCGACTGTCTGGGCTGCAGTGCCCTGGCACATTTCCTaGCAGAGAAAGGACAGCAGGAGTGGGCTTCCTGGTTCCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLPTVWAAVPWHIS*QRKDSRSGLPGSLS Trigger: AGAAAGGGAACCAGGAAGCCCACTCCTGCTGTCCTTTCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | GCACACAGCCTCCTGCCTTGCCAGTGTGAAACCCGGTaGTGTCTTGTTCCCCGGGTGGAATGCAAGAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: AHSLLPCQCETR*CLVPRVECKRM Trigger: CATTCTCTTGCATTCCACCCGGGGAACAAGACAGCACCGGGTTTCACACTGGCAAGGCAGGAGGCTGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000507482.7 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CAA 72 bp | GCCTCCTGCCTTGCCAGTGTGAAACCCGGTGCTGTCTaGTTCCCCGGGTGGAATGCAAGAGAATGCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASCLASVKPGAV*FPGWNARECLG Trigger: TCCCAAGCATTCTCTTGCATTCCACCCGGGGAACAAGACAGCACCGGGTTTCACACTGGCAAGGCAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | GACCTTCATGGGTCCTCTACTGCCGACTGTCTGGGCTaGAGTGCCCTGGCACATTTCCTTGCAGAGAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DLHGSSTADCLG*SALAHFLAEKG Trigger: TCCTTTCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541348.2 |
||
| CDS CAA 90 bp | CAGCACACAGCCTCCTGCCTTGCCAGTGTGAAACCCGGTGCTGTCTaGTTCCCCGGGTGGAATGCAAGAGAATGCTTGGGAAGAACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QHTASCLASVKPGAV*FPGWNARECLGRTL Trigger: CAAAGTTCTTCCCAAGCATTCTCTTGCATTCCACCCGGGGAACAAGACAGCACCGGGTTTCACACTGGCAAGGCAGGAGGCTGTGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | ATACTTCATGGGTCCTCTACTGCCGACTGTCTGGGCTaGAGTGCCCTGGCACATTTCCTTGCAGAGAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ILHGSSTADCLG*SALAHFLAEKG Trigger: TCCTTTCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000507482.7 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CCA 72 bp | CAAAGATACTTCATGGGTCCTCTACTGCCGACTGTCTaGGCTGCAGTGCCCTGGCACATTTCCTTGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QRYFMGPLLPTV*AAVPWHISLQR Trigger: TCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGTATCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000507482.7 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CCA 72 bp | ATAATGACCTTCATGGGTCCTCTACTGCCGACTGTCTaGGCTGCAGTGCCCTGGCACATTTCCTTGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: IMTFMGPLLPTV*AAVPWHISLQR Trigger: TCTCTGCAAGGAAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGGTCATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541348.2 |
||
| CDS TCA 72 bp | TTGTGGCCGGGTCAAAAACAAACTAGACAGGGACCCTaGGGGAGGGAGATTTCGCTGACATCTGTAGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWPGQKQTRQGP*GREISLTSVGR Trigger: CCTACCTACAGATGTCAGCGAAATCTCCCTCCCTCAGGGTCCCTGTCTAGTTTGTTTTTGACCCGGCCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541348.2 |
||
| CDS GCA 72 bp | CTTTCTTTGCACAAAGATACTTCATGGGTCCTCTACTaGCGACTGTCTGGGCTGCAGTGCCCTGGCACATTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLHKDTSWVLY*RLSGLQCPGTF Trigger: AAATGTGCCAGGGCACTGCAGCCCAGACAGTCGGCAGTAGAGGACCCATGAAGTATCTTTGTGCAAAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000507482.7 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | GGTGCTGTCTTGTTCCCCGGGTGGAATGCAAGAGAATaGTTGGGAAGAACTTTGTTACCCAATGAAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GAVLFPGWNARE*LGRTLLPNEAS Trigger: GGAGGCTTCATTGGGTAACAAAGTTCTTCCCAAGCATTCTCTTGCATTCCACCCGGGGAACAAGACAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654468.1 |
||
| CDS CCA 72 bp | GCCAGTGTGAAACCCGGTGCTGTCTTGTTCCCCGGGTaGAATGCAAGAGAATGCTTGGGAAGAACTTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ASVKPGAVLFPG*NARECLGRTLL Trigger: TAACAAAGTTCTTCCCAAGCATTCTCTTGCATTCCACCCGGGGAACAAGACAGCACCGGGTTTCACACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | GAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATaGTGGGCTTCTGCTCCTAGGTTTCCAGCTGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: EESTHPGFQRSL*WASAPRFPAAF Trigger: AAAAGCAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000541348.2 ENST00000667878.1 |
||
| CDS GCA 72 bp | GAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATaGTGGGCTTCTGCTCCTAGGTTTCCAGCTGATATC | + |
|
Preference number: 6 (lower is better) Translates to: EESTHPGFQRSL*WASAPRFPADI Trigger: GATATCAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654468.1 |
||
| CDS CCA 72 bp | GAATCCACGCATCCAGGCTTTCAGAGATCTTTATGCTaGGCTTCTGCTCCTAGGTTTCCAGCTGATATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ESTHPGFQRSLC*ASAPRFPADIC Trigger: GCAGATATCAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654468.1 |
||
| CDS TCA 72 bp | GTTCGCTGGACATCTGCAGAGATCTGTGCATCATGCTaGTATTCACATTTCCACCCCACCGTTTTGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: VRWTSAEICASC*YSHFHPTVLGS Trigger: ACTTCCCAAAACGGTGGGGTGGAAATGTGAATATCAGCATGATGCACAGATCTCTGCAGATGTCCAGCGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | GAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATaGTGGGCTTCTGCTCCTAGGTTTCCAGGTCTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: EESTHPGFQRSL*WASAPRFPGLN Trigger: ATTAAGACCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507482.7 |
||
| CDS GCA 72 bp | ATGCTTGGTGTGCTGAAGACAGCTCAGGGTACTGCATaGAAAGGTGGTTTCTCAATGAAGTGGGTAAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: MLGVLKTAQGTA*KGGFSMKWVKH Trigger: GTGCTTTACCCACTTCATTGAGAAACCACCTTTGCATGCAGTACCCTGAGCTGTCTTCAGCACACCAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | GAGGAATCCACGCATCCAGGCTTTCAGAGATCTTTATaGTGGGCTTCTGCTCCTAGGTTTCCAGCTTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: EESTHPGFQRSL*WASAPRFPAFY Trigger: GTAAAAAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000544727.2 |
||
| CDS CCA 72 bp | GAATCCACGCATCCAGGCTTTCAGAGATCTTTATGCTaGGCTTCTGCTCCTAGGTTTCCAGCTGCTTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: ESTHPGFQRSLC*ASAPRFPAAFY Trigger: GTAAAAAGCAGCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541348.2 ENST00000667878.1 |
||
| CDS CCA 72 bp | GAATCCACGCATCCAGGCTTTCAGAGATCTTTATGCTaGGCTTCTGCTCCTAGGTTTCCAGGTCTTAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: ESTHPGFQRSLC*ASAPRFPGLNF Trigger: GAAATTAAGACCTGGAAACCTAGGAGCAGAAGCCCAGCATAAAGATCTCTGAAAGCCTGGATGCGTGGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507482.7 |
||
| CDS CCA 72 bp | CATCATGCTGATATTCACATTTCCACCCCACCGTTTTaGGAAGTAAGAGAGGAATCCACGCATCCAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: HHADIHISTPPF*EVREESTHPGF Trigger: AAAGCCTGGATGCGTGGATTCCTCTCTTACTTCCCAAAACGGTGGGGTGGAAATGTGAATATCAGCATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS TCA 72 bp | CAGAAAGTCATGGAAGTTTCATCCGCTCTCTTTTCCTaGTCACTGGGCAGCACAGGTTATAACCACTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QKVMEVSSALFS*SLGSTGYNHSC Trigger: ACAAGAGTGGTTATAACCTGTGCTGCCCAGTGATCAGGAAAAGAGAGCGGATGAAACTTCCATGACTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS TCA 72 bp | CTTAGGTACGTGTGTTCAGCCAGATTTCTATGTGTATaGACATCACAACCAAAACCCACATTCCCCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LRYVCSARFLCV*TSQPKPTFPLE Trigger: TTCCAAGGGGAATGTGGGTTTTGGTTGTGATGTTCATACACATAGAAATCTGGCTGAACACACGTACCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654468.1 ENST00000667878.1 |
||
| CDS CAA 90 bp | TTTAATTGGGTTATTTGTTTCTGCCACTGCTGCTTTTCAAAGGATTaGGTGGAGAAGAAGCTGAAAACCCACCACAATACCAAGCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: FNWVICFCHCCFSKD*VEKKLKTHHNTKPH Trigger: GTGTGGCTTGGTATTGTGGTGGGTTTTCAGCTTCTTCTCCACCAAATCCTTTGAAAAGCAGCAGTGGCAGAAACAAATAACCCAATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CAA 90 bp | GGACTAGAGGGTGTGAGTAACGTACAAATCACAGGTTTCAGGGGCTaGATTCTTAAACACAGGCATTCGGCTGATTCTTTAATTGTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: GLEGVSNVQITGFRG*ILKHRHSADSLIVN Trigger: GTTAACAATTAAAGAATCAGCCGAATGCCTGTGTTTAAGAATCAAGCCCCTGAAACCTGTGATTTGTACGTTACTCACACCCTCTAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654468.1 ENST00000667878.1 |
||
| CDS CAA 90 bp | TTGGAACTCATCAAATTGATGACCAAGAAGTTCTCCCAGCATCTCTaGCTAATAGGACTAGAGGGTGTGAGTAACGTACAAATCACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LELIKLMTKKFSQHL*LIGLEGVSNVQITG Trigger: ACCTGTGATTTGTACGTTACTCACACCCTCTAGTCCTATTAGCAAGAGATGCTGGGAGAACTTCTTGGTCATCAATTTGATGAGTTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654468.1 ENST00000667878.1 |
||
| CDS GCA 72 bp | AAAGGTGGTTTCTCAATGAAGTGGGTAAAGCACTTCTaGCCTGAAAATGGCTTCAGGAAGAAAACAGTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: KGGFSMKWVKHF*PENGFRKKTVR Trigger: TCTAACTGTTTTCTTCCTGAAGCCATTTTCAGGGCAGAAGTGCTTTACCCACTTCATTGAGAAACCACCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000507482.7 ENST00000541348.2 ENST00000544727.2 ENST00000654468.1 ENST00000667878.1 |
||
| CDS CAA 72 bp | GCTCCTAGGTTTCCAGCTGCTTTTTACATATCTGCATaGTCTGTAGGAATAAGCCACTTTGCAAATAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: APRFPAAFYISA*SVGISHFANSE Trigger: CTCACTATTTGCAAAGTGGCTTATTCCTACAGACAATGCAGATATGTAAAAAGCAGCTGGAAACCTAGGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541348.2 ENST00000667878.1 |
||
| CDS CAA 72 bp | ATCAAATTGATGACCAAGAAGTTCTCCCAGCATCTCTaGCTAATAGGACTAGAGGGTGTGAGTAACGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: IKLMTKKFSQHL*LIGLEGVSNVQ Trigger: TTGTACGTTACTCACACCCTCTAGTCCTATTAGCAAGAGATGCTGGGAGAACTTCTTGGTCATCAATTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654468.1 ENST00000667878.1 |
||
| CDS CAA 72 bp | TCTGCTCCTAGGTTTCCAGCTTTTTACATATCTGCATaGTCTGTAGGAATAAGCCACTTTGCAAATAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SAPRFPAFYISA*SVGISHFANSE Trigger: CTCACTATTTGCAAAGTGGCTTATTCCTACAGACAATGCAGATATGTAAAAAGCTGGAAACCTAGGAGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000544727.2 |
||