RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02370 (Homo sapiens)

Ensembl gene IDs: ENSG00000230294

Ensembl transcript IDs: ENST00000428272.4

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGGGGGCCAGGAGAGCCCAGGTTGGATGTCATGGTCCCAGACACCTaGTCAGCCGAGAGGGACACCTGCCATCCAGAAGGAGGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: WGPGEPRLDVMVPDT*SAERDTCHPEGGGG
Trigger: CCCACCGCCTCCTTCTGGATGGCAGGTGTCCCTCTCGGCTGAGCAGGTGTCTGGGACCATGACATCCAACCTGGGCTCTCCTGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp GGGCAGCTCTTCTCTGGGGGCCAGGAGAGCCCAGGTTGGATGTCATaGTCCCAGACACCTGCTCAGCCGAGAGGGACACCTGCCATCCAG +
Preference number: 5 (lower is better)
Translates to: GQLFSGGQESPGWMS*SQTPAQPRGTPAIQ
Trigger: CTGGATGGCAGGTGTCCCTCTCGGCTGAGCAGGTGTCTGGGACCATGACATCCAACCTGGGCTCTCCTGGCCCCCAGAGAAGAGCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp ACATGCACTGGGCAGCTCTTCTCTGGGGGCCAGGAGAGCCCAGGTTaGATGTCATGGTCCCAGACACCTGCTCAGCCGAGAGGGACACCT +
Preference number: 5 (lower is better)
Translates to: TCTGQLFSGGQESPG*MSWSQTPAQPRGTP
Trigger: AGGTGTCCCTCTCGGCTGAGCAGGTGTCTGGGACCATGACATCCAACCTGGGCTCTCCTGGCCCCCAGAGAAGAGCTGCCCAGTGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp AATGGTGAGGACTGGGGTACTGGGAGTAGGGACCCTGGGAGAGGCTaGTCCTGGGAACCATGTCAAGGAGCCTGGCGGTCATCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: NGEDWGTGSRDPGRG*SWEPCQGAWRSSGS
Trigger: GCTCCCTGATGACCGCCAGGCTCCTTGACATGGTTCCCAGGACCAGCCTCTCCCAGGGTCCCTACTCCCAGTACCCCAGTCCTCACCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS GCA 90 bp CCCCCTCGAGTTCCACGCCATCCTTGCTCACCCTGCCTGCGCCTCTaGAAGGCACCCTTCTGTGAACGGTTGAGTGAACTCTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PPRVPRHPCSPCLRL*KAPFCERLSELWFL
Trigger: CAGGAACCAGAGTTCACTCAACCGTTCACAGAAGGGTGCCTTGCAGAGGCGCAGGCAGGGTGAGCAAGGATGGCGTGGAACTCGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp GCTGGTGGCCACAGTTGCTTGCAGGACCTAAGGCCACCCACAGCGTaGTGTCCAGCCTGGCTGACCTTACCCTTTTCCGAGGGACCTGAA +
Preference number: 5 (lower is better)
Translates to: AGGHSCLQDLRPPTA*CPAWLTLPFSEGPE
Trigger: TTCAGGTCCCTCGGAAAAGGGTAAGGTCAGCCAGGCTGGACACCACGCTGTGGGTGGCCTTAGGTCCTGCAAGCAACTGTGGCCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp CACGTGAGGGAGAAGAGGAGGTGCTTTCTCCAGAGGAGGGAAGCTTaGTGCAGGCAGCTGCTCCATTCCCTTGGAGCTTGGGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: HVREKRRCFLQRREA*CRQLLHSLGAWAGL
Trigger: CAGCCCAGCCCAAGCTCCAAGGGAATGGAGCAGCTGCCTGCACCAAGCTTCCCTCCTCTGGAGAAAGCACCTCCTCTTCTCCCTCACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp CCATTCATCATGGCTGGGAGGTGGCATGACAGCTGTGGCCTGTCCTaGGGCTGGCAGGGTTCAGCAGGGGCTGAAGGGTCACAAATGGTG +
Preference number: 5 (lower is better)
Translates to: PFIMAGRWHDSCGLS*GWQGSAGAEGSQMV
Trigger: CACCATTTGTGACCCTTCAGCCCCTGCTGAACCCTGCCAGCCCCAGGACAGGCCACAGCTGTCATGCCACCTCCCAGCCATGATGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS TCA 90 bp TCCTGGGAACCATGTCAAGGAGCCTGGCGGTCATCAGGGAGCACGTaGGGGAGAAGAGGAGGTGCTTTCTCCAGAGGAGGGAAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: SWEPCQGAWRSSGST*GRRGGAFSRGGKLG
Trigger: ACCAAGCTTCCCTCCTCTGGAGAAAGCACCTCCTCTTCTCCCTCACGTGCTCCCTGATGACCGCCAGGCTCCTTGACATGGTTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS GCA 90 bp CCGAGAAGTGCAGCCCTTTTGGGTCATGATGGTGTCTGGTTCCCCTaGAGGAGAACATCTGGGCAGCTGTGGCGTTCGCCTTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PRSAALLGHDGVWFP*RRTSGQLWRSPSRE
Trigger: CTCTCTGGAAGGCGAACGCCACAGCTGCCCAGATGTTCTCCTGCAGGGGAACCAGACACCATCATGACCCAAAAGGGCTGCACTTCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp CATGATGGTGTCTGGTTCCCCTGCAGGAGAACATCTGGGCAGCTGTaGCGTTCGCCTTCCAGAGAGACTCCTGTCTCCTCCTACTGGGGA +
Preference number: 5 (lower is better)
Translates to: HDGVWFPCRRTSGQL*RSPSRETPVSSYWG
Trigger: TCCCCAGTAGGAGGAGACAGGAGTCTCTCTGGAAGGCGAACGCCACAGCTGCCCAGATGTTCTCCTGCAGGGGAACCAGACACCATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp AGTTGCTTGCAGGACCTAAGGCCACCCACAGCGTGGTGTCCAGCCTaGCTGACCTTACCCTTTTCCGAGGGACCTGAAGTAGTTGAGGGT +
Preference number: 5 (lower is better)
Translates to: SCLQDLRPPTAWCPA*LTLPFSEGPEVVEG
Trigger: ACCCTCAACTACTTCAGGTCCCTCGGAAAAGGGTAAGGTCAGCCAGGCTGGACACCACGCTGTGGGTGGCCTTAGGTCCTGCAAGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp AGAGGGACACCTGCCATCCAGAAGGAGGCGGTGGGGTTCTCTTCCTaGACACGGAACCTACACGTGACTTCGCTGGTTGTAAAAGTGACA +
Preference number: 5 (lower is better)
Translates to: RGTPAIQKEAVGFSS*TRNLHVTSLVVKVT
Trigger: TGTCACTTTTACAACCAGCGAAGTCACGTGTAGGTTCCGTGTCCAGGAAGAGAACCCCACCGCCTCCTTCTGGATGGCAGGTGTCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 90 bp AAGCAGCCTCCCACTCAATTCACTCAAACAAACAGGCTCTGTGCCTaGGCTGACCCTGCTTTTGAACCCAGCCCAAGGTCAGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: KQPPTQFTQTNRLCA*ADPAFEPSPRSDSS
Trigger: GGAACTGTCTGACCTTGGGCTGGGTTCAAAAGCAGGGTCAGCCCAGGCACAGAGCCTGTTTGTTTGAGTGAATTGAGTGGGAGGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS GCA 90 bp CCCTTTTCCGAGGGACCTGAAGTAGTTGAGGGTGGTCCTGGGACATaGTTGTATATTTTAGAGGTGCAGAGTGTAGAATTTAGAAGTAAA +
Preference number: 5 (lower is better)
Translates to: PFSEGPEVVEGGPGT*LYILEVQSVEFRSK
Trigger: TTTACTTCTAAATTCTACACTCTGCACCTCTAAAATATACAAGCATGTCCCAGGACCACCCTCAACTACTTCAGGTCCCTCGGAAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS GCA 72 bp ATTTATTCCTCGTGCCCTCCCTGCATGGGGCTGTGCTaGTGGCAAGAGCTGGGACCCCCAGTCTCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: IYSSCPPCMGLC*WQELGPPVSRP
Trigger: GGGCCTGGAGACTGGGGGTCCCAGCTCTTGCCAGCAGCACAGCCCCATGCAGGGAGGGCACGAGGAATAAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS GCA 72 bp GGCATTTATTCCTCGTGCCCTCCCTGCATGGGGCTGTaGTGCTGGCAAGAGCTGGGACCCCCAGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GIYSSCPPCMGL*CWQELGPPVSR
Trigger: CCTGGAGACTGGGGGTCCCAGCTCTTGCCAGCAGCACAGCCCCATGCAGGGAGGGCACGAGGAATAAATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CAA 72 bp TGCCTGCGCCTCTGCAAGGCACCCTTCTGTGAACGGTaGAGTGAACTCTGGTTCCTGCCAGGGCCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: CLRLCKAPFCER*SELWFLPGPRL
Trigger: CAGCCGGGGCCCTGGCAGGAACCAGAGTTCACTCAACCGTTCACAGAAGGGTGCCTTGCAGAGGCGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CAA 90 bp CACATGCACTGGGCAGCTCTTCTCTGGGGGCCAGGAGAGCCCAGGTaGGATGTCATGGTCCCAGACACCTGCTCAGCCGAGAGGGACACC +
Preference number: 6 (lower is better)
Translates to: HMHWAALLWGPGEPR*DVMVPDTCSAERDT
Trigger: GGTGTCCCTCTCGGCTGAGCAGGTGTCTGGGACCATGACATCCAACCTGGGCTCTCCTGGCCCCCAGAGAAGAGCTGCCCAGTGCATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS GCA 72 bp GGAGAGCCCAGGTTGGATGTCATGGTCCCAGACACCTaGTCAGCCGAGAGGGACACCTGCCATCCAGAAGGA +
Preference number: 6 (lower is better)
Translates to: GEPRLDVMVPDT*SAERDTCHPEG
Trigger: TCCTTCTGGATGGCAGGTGTCCCTCTCGGCTGAGCAGGTGTCTGGGACCATGACATCCAACCTGGGCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS GCA 72 bp GTTCCACGCCATCCTTGCTCACCCTGCCTGCGCCTCTaGAAGGCACCCTTCTGTGAACGGTTGAGTGAACTC +
Preference number: 6 (lower is better)
Translates to: VPRHPCSPCLRL*KAPFCERLSEL
Trigger: GAGTTCACTCAACCGTTCACAGAAGGGTGCCTTGCAGAGGCGCAGGCAGGGTGAGCAAGGATGGCGTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 72 bp CAGGACCTAAGGCCACCCACAGCGTGGTGTCCAGCCTaGCTGACCTTACCCTTTTCCGAGGGACCTGAAGTA +
Preference number: 6 (lower is better)
Translates to: QDLRPPTAWCPA*LTLPFSEGPEV
Trigger: TACTTCAGGTCCCTCGGAAAAGGGTAAGGTCAGCCAGGCTGGACACCACGCTGTGGGTGGCCTTAGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 72 bp CACAGTTGCTTGCAGGACCTAAGGCCACCCACAGCGTaGTGTCCAGCCTGGCTGACCTTACCCTTTTCCGAG +
Preference number: 6 (lower is better)
Translates to: HSCLQDLRPPTA*CPAWLTLPFSE
Trigger: CTCGGAAAAGGGTAAGGTCAGCCAGGCTGGACACCACGCTGTGGGTGGCCTTAGGTCCTGCAAGCAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 72 bp AAAGTGACACAAGCCTCCTTGCTGCTGCGACGCTGGTaGCCACAGTTGCTTGCAGGACCTAAGGCCACCCAC +
Preference number: 6 (lower is better)
Translates to: KVTQASLLLRRW*PQLLAGPKATH
Trigger: GTGGGTGGCCTTAGGTCCTGCAAGCAACTGTGGCCACCAGCGTCGCAGCAGCAAGGAGGCTTGTGTCACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS GCA 72 bp AAGAGGAGGTGCTTTCTCCAGAGGAGGGAAGCTTGGTaGAGGCAGCTGCTCCATTCCCTTGGAGCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: KRRCFLQRREAW*RQLLHSLGAWA
Trigger: AGCCCAAGCTCCAAGGGAATGGAGCAGCTGCCTGCACCAAGCTTCCCTCCTCTGGAGAAAGCACCTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 72 bp CCGAGAAGTGCAGCCCTTTTGGGTCATGATGGTGTCTaGTTCCCCTGCAGGAGAACATCTGGGCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PRSAALLGHDGV*FPCRRTSGQLW
Trigger: CCACAGCTGCCCAGATGTTCTCCTGCAGGGGAACCAGACACCATCATGACCCAAAAGGGCTGCACTTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 72 bp GTAAAAGTGACACAAGCCTCCTTGCTGCTGCGACGCTaGTGGCCACAGTTGCTTGCAGGACCTAAGGCCACC +
Preference number: 6 (lower is better)
Translates to: VKVTQASLLLRR*WPQLLAGPKAT
Trigger: GGTGGCCTTAGGTCCTGCAAGCAACTGTGGCCACCAGCGTCGCAGCAGCAAGGAGGCTTGTGTCACTTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 72 bp CCTGCCATCCAGAAGGAGGCGGTGGGGTTCTCTTCCTaGACACGGAACCTACACGTGACTTCGCTGGTTGTA +
Preference number: 6 (lower is better)
Translates to: PAIQKEAVGFSS*TRNLHVTSLVV
Trigger: TACAACCAGCGAAGTCACGTGTAGGTTCCGTGTCCAGGAAGAGAACCCCACCGCCTCCTTCTGGATGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 72 bp GAGAAGAGGAGGTGCTTTCTCCAGAGGAGGGAAGCTTaGTGCAGGCAGCTGCTCCATTCCCTTGGAGCTTGG +
Preference number: 6 (lower is better)
Translates to: EKRRCFLQRREA*CRQLLHSLGAW
Trigger: CCAAGCTCCAAGGGAATGGAGCAGCTGCCTGCACCAAGCTTCCCTCCTCTGGAGAAAGCACCTCCTCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CAA 90 bp TTCCACCTCTGCCACATTCTGCAAACCCCGAGAAGTGCAGCCCTTTaGGGTCATGATGGTGTCTGGTTCCCCTGCAGGAGAACATCTGGG +
Preference number: 6 (lower is better)
Translates to: FHLCHILQTPRSAAL*GHDGVWFPCRRTSG
Trigger: CCCAGATGTTCTCCTGCAGGGGAACCAGACACCATCATGACCCAAAAGGGCTGCACTTCTCGGGGTTTGCAGAATGTGGCAGAGGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CAA 72 bp TGCCACATTCTGCAAACCCCGAGAAGTGCAGCCCTTTaGGGTCATGATGGTGTCTGGTTCCCCTGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: CHILQTPRSAAL*GHDGVWFPCRR
Trigger: TCTCCTGCAGGGGAACCAGACACCATCATGACCCAAAAGGGCTGCACTTCTCGGGGTTTGCAGAATGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CCA 72 bp CCCACTCAATTCACTCAAACAAACAGGCTCTGTGCCTaGGCTGACCCTGCTTTTGAACCCAGCCCAAGGTCA +
Preference number: 6 (lower is better)
Translates to: PTQFTQTNRLCA*ADPAFEPSPRS
Trigger: TGACCTTGGGCTGGGTTCAAAAGCAGGGTCAGCCCAGGCACAGAGCCTGTTTGTTTGAGTGAATTGAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CAA 90 bp AATTCACTCAAACAAACAGGCTCTGTGCCTGGGCTGACCCTGCTTTaGAACCCAGCCCAAGGTCAGACAGTTCCCCGTTCCCCATTCATC +
Preference number: 6 (lower is better)
Translates to: NSLKQTGSVPGLTLL*NPAQGQTVPRSPFI
Trigger: GATGAATGGGGAACGGGGAACTGTCTGACCTTGGGCTGGGTTCAAAAGCAGGGTCAGCCCAGGCACAGAGCCTGTTTGTTTGAGTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS GCA 72 bp GAGGGACCTGAAGTAGTTGAGGGTGGTCCTGGGACATaGTTGTATATTTTAGAGGTGCAGAGTGTAGAATTT +
Preference number: 6 (lower is better)
Translates to: EGPEVVEGGPGT*LYILEVQSVEF
Trigger: AAATTCTACACTCTGCACCTCTAAAATATACAAGCATGTCCCAGGACCACCCTCAACTACTTCAGGTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4
CDS CAA 72 bp GGACCTGAAGTAGTTGAGGGTGGTCCTGGGACATGCTaGTATATTTTAGAGGTGCAGAGTGTAGAATTTAGA +
Preference number: 6 (lower is better)
Translates to: GPEVVEGGPGTC*YILEVQSVEFR
Trigger: TCTAAATTCTACACTCTGCACCTCTAAAATATACAAGCATGTCCCAGGACCACCCTCAACTACTTCAGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428272.4