Pregenerated sensors for LINC02368 (Homo sapiens)
Ensembl gene IDs: ENSG00000256659Ensembl transcript IDs: ENST00000541258.2, ENST00000653338.1, ENST00000654850.1, ENST00000662521.1, ENST00000665570.1, ENST00000668356.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTAGGGCTGGGAAAAGGCACAGCCAGGACACAGCCCAGACCGTCTaGCTGAAGGCCCCAGAGAAGCTCCTAACTGCCGTGTCATCCCTG | + |
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Preference number: 5 (lower is better) Translates to: GRAGKRHSQDTAQTV*LKAPEKLLTAVSSL Trigger: CAGGGATGACACGGCAGTTAGGAGCTTCTCTGGGGCCTTCAGGCAGACGGTCTGGGCTGTGTCCTGGCTGTGCCTTTTCCCAGCCCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654850.1 ENST00000665570.1 |
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| CDS GCA 90 bp | GGTAGGGCTGGGAAAAGGCACAGCCAGGACACAGCCCAGACCGTCTaGCTGAAGGCCCCAGAGAAGCTCCTAACTGCCGTGTCATCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GRAGKRHSQDTAQTV*LKAPEKLLTAVSSC Trigger: GCAGGATGACACGGCAGTTAGGAGCTTCTCTGGGGCCTTCAGGCAGACGGTCTGGGCTGTGTCCTGGCTGTGCCTTTTCCCAGCCCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000662521.1 ENST00000668356.1 |
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| CDS GCA 90 bp | GGTAGGGCTGGGAAAAGGCACAGCCAGGACACAGCCCAGACCGTCTaGCTGAAGGCCCCAGAGAAGCTCCTAACTGCCGTGTCATCCCTT | + |
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Preference number: 5 (lower is better) Translates to: GRAGKRHSQDTAQTV*LKAPEKLLTAVSSL Trigger: AAGGGATGACACGGCAGTTAGGAGCTTCTCTGGGGCCTTCAGGCAGACGGTCTGGGCTGTGTCCTGGCTGTGCCTTTTCCCAGCCCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541258.2 |
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| CDS GCA 90 bp | CACAGCCCAGACCGTCTGCCTGAAGGCCCCAGAGAAGCTCCTAACTaGCGTGTCATCATGCACACACGGGTATTGCCAGCCTGCACGCTC | + |
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Preference number: 5 (lower is better) Translates to: HSPDRLPEGPREAPN*RVIMHTRVLPACTL Trigger: GAGCGTGCAGGCTGGCAATACCCGTGTGTGCATGATGACACGGCAGTTAGGAGCTTCTCTGGGGCCTTCAGGCAGACGGTCTGGGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653338.1 |
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| CDS GCA 90 bp | GGTAGGGCTGGGAAAAGGCACAGCCAGGACACAGCCCAGACCGTCTaGCTGAAGGCCCCAGAGAAGCTCCTAACTGCCGTGTCATCATGC | + |
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Preference number: 5 (lower is better) Translates to: GRAGKRHSQDTAQTV*LKAPEKLLTAVSSC Trigger: GCATGATGACACGGCAGTTAGGAGCTTCTCTGGGGCCTTCAGGCAGACGGTCTGGGCTGTGTCCTGGCTGTGCCTTTTCCCAGCCCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653338.1 |
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| CDS GCA 90 bp | CTGCTGGTTCCGGGAAGCGCTGCTATCACAGAAAAACACACCCGCTaGTCCAGCCCTGTGGGAATACGGCACCGCATCTGCCTGTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LLVPGSAAITEKHTR*SSPVGIRHRICLWS Trigger: AGACCACAGGCAGATGCGGTGCCGTATTCCCACAGGGCTGGAGCAGCGGGTGTGTTTTTCTGTGATAGCAGCGCTTCCCGGAACCAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000662521.1 ENST00000665570.1 |
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| CDS CCA 90 bp | TTCCATGGCATTAGGGAGGCGGAAGGGAACTCCCTTTCTGCTTCCTaGAATCCAGGCTGGCTTGGTGACTTGCCGACCACAGAACGCTGT | + |
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Preference number: 5 (lower is better) Translates to: FHGIREAEGNSLSAS*NPGWLGDLPTTERC Trigger: ACAGCGTTCTGTGGTCGGCAAGTCACCAAGCCAGCCTGGATTCCAGGAAGCAGAAAGGGAGTTCCCTTCCGCCTCCCTAATGCCATGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665570.1 |
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| CDS TCA 90 bp | TACCAGCGGTGTGACCTTGGGCAAAGGATGAGCTTTCTCTCTGCCTaGAGTCCCTCACCAGTGACATGGGGTCCAGTGGAAGCTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: YQRCDLGQRMSFLSA*SPSPVTWGPVEAPF Trigger: GAATGGAGCTTCCACTGGACCCCATGTCACTGGTGAGGGACTTCAGGCAGAGAGAAAGCTCATCCTTTGCCCAAGGTCACACCGCTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000662521.1 ENST00000665570.1 ENST00000668356.1 |
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| CDS GCA 90 bp | CCCTTCAGGTCAAATAACGTGTACCCTGCTGGTTCCGGGAAGCGCTaGTATCACAGAAAAACACACCCGCTGCTCCAGCCCTGTGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: PFRSNNVYPAGSGKR*YHRKTHPLLQPCGN Trigger: ATTCCCACAGGGCTGGAGCAGCGGGTGTGTTTTTCTGTGATAGCAGCGCTTCCCGGAACCAGCAGGGTACACGTTATTTGACCTGAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541258.2 ENST00000653338.1 |
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| CDS CCA 90 bp | GAAGCGCTGCTATCACAGAAAAACACACCCGCTGCTCCAGCCCTGTaGGAATACGGCACCGCATCTGCCTGTGGTCTCTGTCCAAATTTC | + |
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Preference number: 5 (lower is better) Translates to: EALLSQKNTPAAPAL*EYGTASACGLCPNF Trigger: GAAATTTGGACAGAGACCACAGGCAGATGCGGTGCCGTATTCCCACAGGGCTGGAGCAGCGGGTGTGTTTTTCTGTGATAGCAGCGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000662521.1 ENST00000665570.1 |
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| CDS CCA 90 bp | TTTGACGCCTCTCAGCCTCAGAGCATAGAGGACGGTTCTGGCCACTaGCCAGCCTTCTCCCAAGGTCAAGGACATGAAACTGGCATGATG | + |
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Preference number: 5 (lower is better) Translates to: FDASQPQSIEDGSGH*PAFSQGQGHETGMM Trigger: CATCATGCCAGTTTCATGTCCTTGACCTTGGGAGAAGGCTGGCCAGTGGCCAGAACCGTCCTCTATGCTCTGAGGCTGAGAGGCGTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000541258.2 ENST00000654850.1 |
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| CDS GCA 90 bp | AAGCTCCATTCTGTGGGTACGTGGAGAAACTTAAATGAGATGCTGTaGATGGGGTCAGGCTCGTGGCTGGCCCCACATAGAGGAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: KLHSVGTWRNLNEML*MGSGSWLAPHRGVP Trigger: GGGAACTCCTCTATGTGGGGCCAGCCACGAGCCTGACCCCATGCACAGCATCTCATTTAAGTTTCTCCACGTACCCACAGAATGGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654850.1 |
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| CDS TCA 90 bp | GTTCTTTGGGGGCTCAAAGGTAATGTGTGTCACAGAGCTTTGCTTTaGCGCCTCTCAGCCTCAGAGCATAGAGGACGGTTCTGGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: VLWGLKGNVCHRALL*RLSASEHRGRFWPL Trigger: CAGTGGCCAGAACCGTCCTCTATGCTCTGAGGCTGAGAGGCGTCAAAGCAAAGCTCTGTGACACACATTACCTTTGAGCCCCCAAAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541258.2 ENST00000654850.1 |
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| CDS GCA 90 bp | GCTCCTAACTGCCGTGTCATCATGCACACACGGGTATTGCCAGCCTaGACGCTCCCAAGGAGGTTCATACTCCTGTCTAGATATGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: APNCRVIMHTRVLPA*TLPRRFILLSRYVK Trigger: CTTCACATATCTAGACAGGAGTATGAACCTCCTTGGGAGCGTGCAGGCTGGCAATACCCGTGTGTGCATGATGACACGGCAGTTAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653338.1 |
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| CDS TCA 90 bp | CAGCCTGCACGCTCCCAAGGAGGTTCATACTCCTGTCTAGATATGTaGAGAGACTGCACCCTATTTTGCACCCTTGCTCGTGGTCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: QPARSQGGSYSCLDM*RDCTLFCTLARGQV Trigger: AACCTGACCACGAGCAAGGGTGCAAAATAGGGTGCAGTCTCTTCACATATCTAGACAGGAGTATGAACCTCCTTGGGAGCGTGCAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653338.1 |
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| CDS GCA 90 bp | TTCATGTTCTTTGGGGGCTCAAAGGTAATGTGTGTCACAGAGCTTTaGTTTGACGCCTCTCAGCCTCAGAGCATAGAGGACGGTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: FMFFGGSKVMCVTEL*FDASQPQSIEDGSG Trigger: GCCAGAACCGTCCTCTATGCTCTGAGGCTGAGAGGCGTCAAAGCAAAGCTCTGTGACACACATTACCTTTGAGCCCCCAAAGAACATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541258.2 ENST00000654850.1 |
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| CDS TCA 90 bp | GATGAGGAGGTCAGTTTGAACTTCATTTGCTTTTTACCAGCGGTGTaGCCTTGGGCAAAGGATGAGCTTTCTCTCTGCCTGAAGTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: DEEVSLNFICFLPAV*PWAKDELSLCLKSL Trigger: GAGGGACTTCAGGCAGAGAGAAAGCTCATCCTTTGCCCAAGGTCACACCGCTGGTAAAAAGCAAATGAAGTTCAAACTGACCTCCTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000665570.1 ENST00000668356.1 |
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| CDS GCA 72 bp | GACCGTCTGCCTGAAGGCCCCAGAGAAGCTCCTAACTaGCGTGTCATCCTGCCCTGCTGGTTCCGGGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: DRLPEGPREAPN*RVILPCWFREA Trigger: CGCTTCCCGGAACCAGCAGGGCAGGATGACACGGCAGTTAGGAGCTTCTCTGGGGCCTTCAGGCAGACGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662521.1 |
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| CDS GCA 72 bp | GCCGTGTCATCCTGCCCTGCTGGTTCCGGGAAGCGCTaGTATCACAGAAAAACACACCCGCTGCTCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: AVSSCPAGSGKR*YHRKTHPLLQP Trigger: GGGCTGGAGCAGCGGGTGTGTTTTTCTGTGATAGCAGCGCTTCCCGGAACCAGCAGGGCAGGATGACACGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662521.1 |
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| CDS GCA 72 bp | CCGGGAAGCGCTGCTATCACAGAAAAACACACCCGCTaGTCCAGCCCTGTGGGAATACGGCACCGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: PGSAAITEKHTR*SSPVGIRHRIC Trigger: GCAGATGCGGTGCCGTATTCCCACAGGGCTGGAGCAGCGGGTGTGTTTTTCTGTGATAGCAGCGCTTCCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000662521.1 ENST00000665570.1 |
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| CDS GCA 72 bp | GACCGTCTGCCTGAAGGCCCCAGAGAAGCTCCTAACTaGCGTGTCATCATGCACACACGGGTATTGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: DRLPEGPREAPN*RVIMHTRVLPA Trigger: GGCTGGCAATACCCGTGTGTGCATGATGACACGGCAGTTAGGAGCTTCTCTGGGGCCTTCAGGCAGACGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653338.1 |
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| CDS GCA 72 bp | AACTGCCGTGTCATCCCTGCTGGTTCCGGGAAGCGCTaGTATCACAGAAAAACACACCCGCTGCTCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: NCRVIPAGSGKR*YHRKTHPLLQP Trigger: GGGCTGGAGCAGCGGGTGTGTTTTTCTGTGATAGCAGCGCTTCCCGGAACCAGCAGGGATGACACGGCAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654850.1 ENST00000665570.1 |
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| CDS CAA 72 bp | GGAACTCCCTTTCTGCTTCCTGGAATCCAGGCTGGCTaGGTGACTTGCCGACCACAGAACGCTGTGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: GTPFLLPGIQAG*VTCRPQNAVEG Trigger: CCCTTCCACAGCGTTCTGTGGTCGGCAAGTCACCAAGCCAGCCTGGATTCCAGGAAGCAGAAAGGGAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665570.1 |
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| CDS TCA 72 bp | CTCCCTTTCTGCTTCCTGGAATCCAGGCTGGCTTGGTaGCTTGCCGACCACAGAACGCTGTGGAAGGGACAT | + |
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Preference number: 6 (lower is better) Translates to: LPFCFLESRLAW*LADHRTLWKGH Trigger: ATGTCCCTTCCACAGCGTTCTGTGGTCGGCAAGTCACCAAGCCAGCCTGGATTCCAGGAAGCAGAAAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665570.1 |
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| CDS GCA 72 bp | CTCCTAACTGCCGTGTCATCATGCACACACGGGTATTaGCAGCCTGCACGCTCCCAAGGAGGTTCATACTCC | + |
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Preference number: 6 (lower is better) Translates to: LLTAVSSCTHGY*QPARSQGGSYS Trigger: GGAGTATGAACCTCCTTGGGAGCGTGCAGGCTGGCAATACCCGTGTGTGCATGATGACACGGCAGTTAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653338.1 |
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| CDS CCA 72 bp | CTATCACAGAAAAACACACCCGCTGCTCCAGCCCTGTaGGAATACGGCACCGCATCTGCCTGTGGTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LSQKNTPAAPAL*EYGTASACGLC Trigger: ACAGAGACCACAGGCAGATGCGGTGCCGTATTCCCACAGGGCTGGAGCAGCGGGTGTGTTTTTCTGTGATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000662521.1 ENST00000665570.1 |
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| CDS CCA 72 bp | GAAGGGAACTCCCTTTCTGCTTCCTGGAATCCAGGCTaGCTTGGTGACTTGCCGACCACAGAACGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: EGNSLSASWNPG*LGDLPTTERCG Trigger: TCCACAGCGTTCTGTGGTCGGCAAGTCACCAAGCCAGCCTGGATTCCAGGAAGCAGAAAGGGAGTTCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665570.1 |
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| CDS CCA 72 bp | ATTAGGGAGGCGGAAGGGAACTCCCTTTCTGCTTCCTaGAATCCAGGCTGGCTTGGTGACTTGCCGACCACA | + |
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Preference number: 6 (lower is better) Translates to: IREAEGNSLSAS*NPGWLGDLPTT Trigger: TGTGGTCGGCAAGTCACCAAGCCAGCCTGGATTCCAGGAAGCAGAAAGGGAGTTCCCTTCCGCCTCCCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665570.1 |
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| CDS CAA 72 bp | GCTCCTAACTGCCGTGTCATCATGCACACACGGGTATaGCCAGCCTGCACGCTCCCAAGGAGGTTCATACTC | + |
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Preference number: 6 (lower is better) Translates to: APNCRVIMHTRV*PACTLPRRFIL Trigger: GAGTATGAACCTCCTTGGGAGCGTGCAGGCTGGCAATACCCGTGTGTGCATGATGACACGGCAGTTAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653338.1 |
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| CDS GCA 72 bp | TCAAATAACGTGTACCCTGCTGGTTCCGGGAAGCGCTaGTATCACAGAAAAACACACCCGCTGCTCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SNNVYPAGSGKR*YHRKTHPLLQP Trigger: GGGCTGGAGCAGCGGGTGTGTTTTTCTGTGATAGCAGCGCTTCCCGGAACCAGCAGGGTACACGTTATTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541258.2 ENST00000653338.1 |
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| CDS CCA 72 bp | TCTCAGCCTCAGAGCATAGAGGACGGTTCTGGCCACTaGCCAGCCTTCTCCCAAGGTCAAGGACATGAAACT | + |
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Preference number: 6 (lower is better) Translates to: SQPQSIEDGSGH*PAFSQGQGHET Trigger: AGTTTCATGTCCTTGACCTTGGGAGAAGGCTGGCCAGTGGCCAGAACCGTCCTCTATGCTCTGAGGCTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000541258.2 ENST00000654850.1 |
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| CDS TCA 72 bp | TGTGACCTTGGGCAAAGGATGAGCTTTCTCTCTGCCTaGAGTCCCTCACCAGTGACATGGGGTCCAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: CDLGQRMSFLSA*SPSPVTWGPVE Trigger: TTCCACTGGACCCCATGTCACTGGTGAGGGACTTCAGGCAGAGAGAAAGCTCATCCTTTGCCCAAGGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000662521.1 ENST00000665570.1 ENST00000668356.1 |
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| CDS GCA 72 bp | TCTGTGGGTACGTGGAGAAACTTAAATGAGATGCTGTaGATGGGGTCAGGCTCGTGGCTGGCCCCACATAGA | + |
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Preference number: 6 (lower is better) Translates to: SVGTWRNLNEML*MGSGSWLAPHR Trigger: TCTATGTGGGGCCAGCCACGAGCCTGACCCCATGCACAGCATCTCATTTAAGTTTCTCCACGTACCCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654850.1 |
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| CDS CCA 72 bp | ACACTCAGCATGGCCTTCCTCTTTAGGGGAAGTAGCTaGAGTCTGGACTGGGAGAGAGAGAGTAGAAGCACC | + |
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Preference number: 6 (lower is better) Translates to: TLSMAFLFRGSS*SLDWERESRST Trigger: GGTGCTTCTACTCTCTCTCTCCCAGTCCAGACTCCAGCTACTTCCCCTAAAGAGGAAGGCCATGCTGAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000541258.2 ENST00000654850.1 |
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| CDS CCA 72 bp | AACTTAAATGAGATGCTGTGCATGGGGTCAGGCTCGTaGCTGGCCCCACATAGAGGAGTTCCCACTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: NLNEMLCMGSGS*LAPHRGVPTLH Trigger: ATGAAGAGTGGGAACTCCTCTATGTGGGGCCAGCCACGAGCCTGACCCCATGCACAGCATCTCATTTAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654850.1 |
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| CDS CAA 72 bp | CTAACTGCCGTGTCATCCCTTGCTCGTGGTCAGGTTTaGGGGATGGCTCCCCTATTTAGACTCTTCCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LTAVSSLARGQV*GMAPLFRLFLS Trigger: TGAGAGGAAGAGTCTAAATAGGGGAGCCATCCCCAAAACCTGACCACGAGCAAGGGATGACACGGCAGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541258.2 |
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| CDS CAA 72 bp | GTCAACGCCACTCGGCCCCAGCCCATCGCTGGGCTGTaGGTTGAATTGTGTCCAAGGAAAGATAGGTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: VNATRPQPIAGL*VELCPRKDRLK Trigger: TTTTAACCTATCTTTCCTTGGACACAATTCAACCAACAGCCCAGCGATGGGCTGGGGCCGAGTGGCGTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662521.1 |
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| CDS GCA 72 bp | TTTGGGGGCTCAAAGGTAATGTGTGTCACAGAGCTTTaGTTTGACGCCTCTCAGCCTCAGAGCATAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: FGGSKVMCVTEL*FDASQPQSIED Trigger: GTCCTCTATGCTCTGAGGCTGAGAGGCGTCAAAGCAAAGCTCTGTGACACACATTACCTTTGAGCCCCCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000541258.2 ENST00000654850.1 |
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| CDS CCA 72 bp | CCGCTAACGAGACCAGACATCAAAGGAGATGAGTCTTaGAGTAACACGTCCTCAGCTGGAGACACTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: PLTRPDIKGDES*SNTSSAGDTQH Trigger: ATGCTGAGTGTCTCCAGCTGAGGACGTGTTACTCCAAGACTCATCTCCTTTGATGTCTGGTCTCGTTAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000541258.2 ENST00000654850.1 |
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| CDS CCA 72 bp | CATGGGGTCCAGTGGAAGCTCCATTCTGTGGGTACGTaGAGAAACTTAAATGAGATGCTGTGCATGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: HGVQWKLHSVGT*RNLNEMLCMGS Trigger: TGACCCCATGCACAGCATCTCATTTAAGTTTCTCCACGTACCCACAGAATGGAGCTTCCACTGGACCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654850.1 |
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| CDS TCA 72 bp | CGCTCCCAAGGAGGTTCATACTCCTGTCTAGATATGTaGAGAGACTGCACCCTATTTTGCACCCTTGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RSQGGSYSCLDM*RDCTLFCTLAR Trigger: ACGAGCAAGGGTGCAAAATAGGGTGCAGTCTCTTCACATATCTAGACAGGAGTATGAACCTCCTTGGGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653338.1 |
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| CDS CAA 90 bp | CAAAATCAAGATTCACAACAGTTCCCTTTGGGTCTGATCCTAGAGTaGTACCCTTCCCCATTCCATGGCATTAGGGAGGCGGAAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: QNQDSQQFPLGLILE*YPSPFHGIREAEGN Trigger: GTTCCCTTCCGCCTCCCTAATGCCATGGAATGGGGAAGGGTACAACTCTAGGATCAGACCCAAAGGGAACTGTTGTGAATCTTGATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000541258.2 ENST00000662521.1 ENST00000665570.1 |
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| CDS TCA 72 bp | GTCAGTTTGAACTTCATTTGCTTTTTACCAGCGGTGTaGCCTTGGGCAAAGGATGAGCTTTCTCTCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VSLNFICFLPAV*PWAKDELSLCL Trigger: CAGGCAGAGAGAAAGCTCATCCTTTGCCCAAGGTCACACCGCTGGTAAAAAGCAAATGAAGTTCAAACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000665570.1 ENST00000668356.1 |
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| CDS CAA 90 bp | CCAATAGCCAAGAAGTCACAAAATCAAGATTCACAACAGTTCCCTTaGGGTCTGATCCTAGAGTTGTACCCTTCCCCATTCCATGGCATT | + |
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Preference number: 6 (lower is better) Translates to: PIAKKSQNQDSQQFP*GLILELYPSPFHGI Trigger: AATGCCATGGAATGGGGAAGGGTACAACTCTAGGATCAGACCCAAAGGGAACTGTTGTGAATCTTGATTTTGTGACTTCTTGGCTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000662521.1 ENST00000665570.1 |
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| CDS CAA 90 bp | TCTGCCATCTCATGTAATTATCACCTCATAGAATCCAGAAGGGAGTaGCTACTATTTATGCCTTCGCAGAGGGTGGATGTGAGAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SAISCNYHLIESRRE*LLFMPSQRVDVRRR Trigger: TCTCCTTCTCACATCCACCCTCTGCGAAGGCATAAATAGTAGCAACTCCCTTCTGGATTCTATGAGGTGATAATTACATGAGATGGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000662521.1 ENST00000665570.1 ENST00000668356.1 |
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| CDS TCA 72 bp | GACGATGATGTCGATGATGACGAAAACAATAATAAGTaGGAAGAATCGCTCACTAGGTCCCAGGCACATTGC | + |
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Preference number: 6 (lower is better) Translates to: DDDVDDDENNNK*EESLTRSQAHC Trigger: GCAATGTGCCTGGGACCTAGTGAGCGATTCTTCTCACTTATTATTGTTTTCGTCATCATCGACATCATCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000662521.1 ENST00000665570.1 |
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| CDS TCA 72 bp | GGCCTCTTGGGCTGTGTACTCTTGACACTCTTGCTCTaGGAACTAAGCAGGCATATTTCATATCAAAATAGT | + |
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Preference number: 6 (lower is better) Translates to: GLLGCVLLTLLL*ELSRHISYQNS Trigger: ACTATTTTGATATGAAATATGCCTGCTTAGTTCTCAGAGCAAGAGTGTCAAGAGTACACAGCCCAAGAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665570.1 |
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| CDS CAA 72 bp | AAGAAGTCACAAAATCAAGATTCACAACAGTTCCCTTaGGGTCTGATCCTAGAGTTGTACCCTTCCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: KKSQNQDSQQFP*GLILELYPSPF Trigger: GAATGGGGAAGGGTACAACTCTAGGATCAGACCCAAAGGGAACTGTTGTGAATCTTGATTTTGTGACTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000662521.1 ENST00000665570.1 |
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| CDS CAA 72 bp | TCATGTAATTATCACCTCATAGAATCCAGAAGGGAGTaGCTACTATTTATGCCTTCGCAGAGGGTGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: SCNYHLIESRRE*LLFMPSQRVDV Trigger: CACATCCACCCTCTGCGAAGGCATAAATAGTAGCAACTCCCTTCTGGATTCTATGAGGTGATAATTACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000654850.1 ENST00000662521.1 ENST00000665570.1 ENST00000668356.1 |
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| CDS CAA 72 bp | ACTAGGTCCCAGGCACATTGCCAAGTGGCTTACATATaGTCTTCTCCTATGATAAGTATTTTTAGTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TRSQAHCQVAYI*SSPMISIFSPS Trigger: AGAAGGACTAAAAATACTTATCATAGGAGAAGACAATATGTAAGCCACTTGGCAATGTGCCTGGGACCTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000541258.2 ENST00000653338.1 ENST00000662521.1 ENST00000665570.1 |
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