Pregenerated sensors for LINC02367 (Homo sapiens)
Ensembl gene IDs: ENSG00000260423Ensembl transcript IDs: ENST00000567749.1, ENST00000652814.1, ENST00000652834.1, ENST00000656726.1, ENST00000656801.1, ENST00000657625.1, ENST00000662934.1, ENST00000663918.1, ENST00000664173.1, ENST00000668237.1, ENST00000670355.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCCACAGTCAGTCTCCGAGGGCTGAAGTCACGGTGTCATCAGGGCTaGCTCACTCTGGAGCTCCAGGGAGACGTTGCTCCCTTGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: STVSLRGLKSRCHQG*LTLELQGDVAPLPF Trigger: GAAAGGCAAGGGAGCAACGTCTCCCTGGAGCTCCAGAGTGAGCCAGCCCTGATGACACCGTGACTTCAGCCCTCGGAGACTGACTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000567749.1 ENST00000652814.1 ENST00000656726.1 ENST00000657625.1 ENST00000662934.1 |
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| CDS TCA 90 bp | ACACACACATCCACACACACACACACACAGGCGCGAATGTGCCCATaGAAAAGGGAGGCAGAGGTTAGAGTGATGTGTCTACCAGGCATG | + |
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Preference number: 5 (lower is better) Translates to: THTSTHTHTQARMCP*KREAEVRVMCLPGM Trigger: CATGCCTGGTAGACACATCACTCTAACCTCTGCCTCCCTTTTTCATGGGCACATTCGCGCCTGTGTGTGTGTGTGTGTGGATGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000567749.1 ENST00000656726.1 ENST00000656801.1 ENST00000662934.1 ENST00000664173.1 ENST00000668237.1 ENST00000670355.1 |
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| CDS GCA 90 bp | ATAATATCCTGCCAGGCTGCCAGGCAGCTAGACTGGAACTATGCTTaGTACAAAGTTATTTCCAGACAGACTGTGAGCACACTGTGCCTA | + |
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Preference number: 5 (lower is better) Translates to: IISCQAARQLDWNYA*YKVISRQTVSTLCL Trigger: TAGGCACAGTGTGCTCACAGTCTGTCTGGAAATAACTTTGTAGCAAGCATAGTTCCAGTCTAGCTGCCTGGCAGCCTGGCAGGATATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000567749.1 ENST00000652834.1 ENST00000657625.1 ENST00000663918.1 |
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| CDS TCA 90 bp | CAGCCAGGTAACCCAGGAGAATCTCCCCATCTCAACATCCTTAGTTaGATCACATCTGCAAAGTCCCTTTTGCCAGGTAAGGTAAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: QPGNPGESPHLNILS*ITSAKSLLPGKVRN Trigger: GTTTCTTACCTTACCTGGCAAAAGGGACTTTGCAGATGTGATTCAACTAAGGATGTTGAGATGGGGAGATTCTCCTGGGTTACCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000652814.1 ENST00000656726.1 ENST00000662934.1 |
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| CDS GCA 90 bp | AATAATAATATCCTGCCAGGCTGCCAGGCAGCTAGACTGGAACTATaGTTGCTACAAAGTTATTTCCAGACAGACTGTGAGCACACTGTG | + |
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Preference number: 5 (lower is better) Translates to: NNNILPGCQAARLEL*LLQSYFQTDCEHTV Trigger: CACAGTGTGCTCACAGTCTGTCTGGAAATAACTTTGTAGCAAGCATAGTTCCAGTCTAGCTGCCTGGCAGCCTGGCAGGATATTATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000567749.1 ENST00000652834.1 ENST00000657625.1 ENST00000663918.1 |
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| CDS CCA 90 bp | TTTGCAGATGTTACCAAAGTAAGAGAAGCTCACAGTGGATTAGAGTaGGCCCCATCTAGTCTAATGATTGCTGTCCTTAACACACACATC | + |
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Preference number: 5 (lower is better) Translates to: FADVTKVREAHSGLE*APSSLMIAVLNTHI Trigger: GATGTGTGTGTTAAGGACAGCAATCATTAGACTAGATGGGGCCCACTCTAATCCACTGTGAGCTTCTCTTACTTTGGTAACATCTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000567749.1 ENST00000656726.1 ENST00000656801.1 ENST00000662934.1 ENST00000664173.1 ENST00000668237.1 ENST00000670355.1 |
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| CDS TCA 90 bp | CGATACACATCTAACACGGATACCTCTCAAGAGCTTTACACTAAGTaGAAGCAGCCAGACACAAAAGATACCTACTGTAGGATTCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: RYTSNTDTSQELYTK*KQPDTKDTYCRILL Trigger: TAAAAGAATCCTACAGTAGGTATCTTTTGTGTCTGGCTGCTTTCACTTAGTGTAAAGCTCTTGAGAGGTATCCGTGTTAGATGTGTATCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656726.1 |
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| CDS CCA 72 bp | CCCAGTTCCCAGAGGCGGCGTGGGTTCCTTGGCTCATaGCCCCGCAGCACATGGACCTCTGCTTCTACGGCC | + |
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Preference number: 6 (lower is better) Translates to: PSSQRRRGFLGS*PRSTWTSASTA Trigger: GGCCGTAGAAGCAGAGGTCCATGTGCTGCGGGGCCATGAGCCAAGGAACCCACGCCGCCTCTGGGAACTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000567749.1 ENST00000652814.1 ENST00000656726.1 ENST00000657625.1 ENST00000662934.1 |
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| CDS GCA 72 bp | GGCTCACTCTGGAGCTCCAGGGAGACGTTGCTCCCTTaGCTTTCCCAGTTCCCAGAGGCGGCGTGGGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GSLWSSRETLLP*LSQFPEAAWVP Trigger: AGGAACCCACGCCGCCTCTGGGAACTGGGAAAGGCAAGGGAGCAACGTCTCCCTGGAGCTCCAGAGTGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000567749.1 ENST00000652814.1 ENST00000656726.1 ENST00000657625.1 ENST00000662934.1 |
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| CDS CCA 72 bp | CGGCGTGGGTTCCTTGGCTCATGGCCCCGCAGCACATaGACCTCTGCTTCTACGGCCACATCTCCGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RRGFLGSWPRST*TSASTATSPSL Trigger: CAGAGACGGAGATGTGGCCGTAGAAGCAGAGGTCCATGTGCTGCGGGGCCATGAGCCAAGGAACCCACGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000567749.1 ENST00000652814.1 ENST00000656726.1 ENST00000657625.1 ENST00000662934.1 |
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| CDS CAA 72 bp | ATCAGGGCTGGCTCACTCTGGAGCTCCAGGGAGACGTaGCTCCCTTGCCTTTCCCAGTTCCCAGAGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: IRAGSLWSSRET*LPCLSQFPEAA Trigger: CGCCGCCTCTGGGAACTGGGAAAGGCAAGGGAGCAACGTCTCCCTGGAGCTCCAGAGTGAGCCAGCCCTGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000567749.1 ENST00000652814.1 ENST00000656726.1 ENST00000657625.1 ENST00000662934.1 |
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| CDS CCA 72 bp | AGTCTCCGAGGGCTGAAGTCACGGTGTCATCAGGGCTaGCTCACTCTGGAGCTCCAGGGAGACGTTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SLRGLKSRCHQG*LTLELQGDVAP Trigger: GGGAGCAACGTCTCCCTGGAGCTCCAGAGTGAGCCAGCCCTGATGACACCGTGACTTCAGCCCTCGGAGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000567749.1 ENST00000652814.1 ENST00000656726.1 ENST00000657625.1 ENST00000662934.1 |
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| CDS CCA 72 bp | GGTCTCACCATGTCGCCCAGGCTGACCTCAGACACGTaGGCTCAAGTGATCATCCTGCTTTGGGCTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GLTMSPRLTSDT*AQVIILLWASK Trigger: CTTGGAAGCCCAAAGCAGGATGATCACTTGAGCCCACGTGTCTGAGGTCAGCCTGGGCGACATGGTGAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656726.1 ENST00000662934.1 |
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| CDS TCA 72 bp | CAGAAACCAGCAGAAGCCAGGAGAGAGCCATGGAGTTaGTCTGCCTCACAGCCTCTAGTTGGAACTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: QKPAEARREPWS*SASQPLVGTHP Trigger: GGGATGAGTTCCAACTAGAGGCTGTGAGGCAGATCAACTCCATGGCTCTCTCCTGGCTTCTGCTGGTTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000567749.1 ENST00000656726.1 ENST00000656801.1 ENST00000662934.1 ENST00000664173.1 ENST00000668237.1 ENST00000670355.1 |
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| CDS GCA 72 bp | ACCAGCAGAAGCCAGGAGAGAGCCATGGAGTTGATCTaGCTCACAGCCTCTAGTTGGAACTCATCCCGTCAA | + |
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Preference number: 6 (lower is better) Translates to: TSRSQERAMELI*LTASSWNSSRQ Trigger: TTGACGGGATGAGTTCCAACTAGAGGCTGTGAGGCAGATCAACTCCATGGCTCTCTCCTGGCTTCTGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000567749.1 ENST00000656726.1 ENST00000656801.1 ENST00000662934.1 ENST00000664173.1 ENST00000668237.1 ENST00000670355.1 |
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| CDS CCA 72 bp | GGGGAACTCTCACACGGTGCTGACGGACATACAAGATaGCACAGCTGCTGTGGAAAACAGTTCAGCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GELSHGADGHTR*HSCCGKQFSSS Trigger: GGAACTGCTGAACTGTTTTCCACAGCAGCTGTGCCATCTTGTATGTCCGTCAGCACCGTGTGAGAGTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656726.1 |
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| CDS CAA 72 bp | CCAGAAACCAGCAGAAGCCAGGAGAGAGCCATGGAGTaGATCTGCCTCACAGCCTCTAGTTGGAACTCATCC | + |
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Preference number: 6 (lower is better) Translates to: PETSRSQERAME*ICLTASSWNSS Trigger: GGATGAGTTCCAACTAGAGGCTGTGAGGCAGATCAACTCCATGGCTCTCTCCTGGCTTCTGCTGGTTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000567749.1 ENST00000656726.1 ENST00000656801.1 ENST00000662934.1 ENST00000664173.1 ENST00000668237.1 ENST00000670355.1 |
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| CDS TCA 72 bp | GAATGTGCCCATGAAAAAGGGAGGCAGAGGTTAGAGTaGTGTGTCTACCAGGCATGGGAAGTGAACGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ECAHEKGRQRLE*CVYQAWEVNGC Trigger: GCAACCGTTCACTTCCCATGCCTGGTAGACACATCACTCTAACCTCTGCCTCCCTTTTTCATGGGCACATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000567749.1 ENST00000656726.1 ENST00000656801.1 ENST00000662934.1 ENST00000664173.1 ENST00000668237.1 ENST00000670355.1 |
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| CDS CAA 72 bp | CTGCCAGGCTGCCAGGCAGCTAGACTGGAACTATGCTaGCTACAAAGTTATTTCCAGACAGACTGTGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LPGCQAARLELC*LQSYFQTDCEH Trigger: GTGCTCACAGTCTGTCTGGAAATAACTTTGTAGCAAGCATAGTTCCAGTCTAGCTGCCTGGCAGCCTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000567749.1 ENST00000652834.1 ENST00000657625.1 ENST00000663918.1 |
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| CDS CAA 72 bp | ACCTCTGCTTCTACGGCCACATCTCCGTCTCTGACTTaGGTCTTTCTGCTTCCCTCTAATGAGGACTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: TSASTATSPSLT*VFLLPSNEDSC Trigger: ACAGGAGTCCTCATTAGAGGGAAGCAGAAAGACCAAAGTCAGAGACGGAGATGTGGCCGTAGAAGCAGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652814.1 ENST00000656726.1 ENST00000662934.1 |
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| CDS CAA 72 bp | GACCTCAGACACGTGGGCTCAAGTGATCATCCTGCTTaGGGCTTCCAAGTAGTTAAGACTACAGGCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: DLRHVGSSDHPA*GFQVVKTTGRC Trigger: GCATCTGCCTGTAGTCTTAACTACTTGGAAGCCCAAAGCAGGATGATCACTTGAGCCCACGTGTCTGAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656726.1 ENST00000662934.1 |
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| CDS CAA 72 bp | ACACTAGAACAGGTGAAATCAAAAGACACATCTGCGTaGGCAAGCCTGCAGAGCAGGGGAACTCTCACACGG | + |
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Preference number: 6 (lower is better) Translates to: TLEQVKSKDTSA*ASLQSRGTLTR Trigger: CCGTGTGAGAGTTCCCCTGCTCTGCAGGCTTGCCAACGCAGATGTGTCTTTTGATTTCACCTGTTCTAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656726.1 |
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| CDS CAA 90 bp | AGCACATGGACCTCTGCTTCTACGGCCACATCTCCGTCTCTGACTTaGGTCTTTCTGCTTCCCTCTAATGAGGACTCCTGTGATTACATC | + |
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Preference number: 6 (lower is better) Translates to: STWTSASTATSPSLT*VFLLPSNEDSCDYI Trigger: GATGTAATCACAGGAGTCCTCATTAGAGGGAAGCAGAAAGACCAAAGTCAGAGACGGAGATGTGGCCGTAGAAGCAGAGGTCCATGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652814.1 ENST00000656726.1 ENST00000662934.1 |
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| CDS GCA 72 bp | TGCCAGGCTGCCAGGCAGCTAGACTGGAACTATGCTTaGTACAAAGTTATTTCCAGACAGACTGTGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: CQAARQLDWNYA*YKVISRQTVST Trigger: TGTGCTCACAGTCTGTCTGGAAATAACTTTGTAGCAAGCATAGTTCCAGTCTAGCTGCCTGGCAGCCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000567749.1 ENST00000652834.1 ENST00000657625.1 ENST00000663918.1 |
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| CDS GCA 72 bp | ATCCTGCCAGGCTGCCAGGCAGCTAGACTGGAACTATaGTTGCTACAAAGTTATTTCCAGACAGACTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: ILPGCQAARLEL*LLQSYFQTDCE Trigger: CTCACAGTCTGTCTGGAAATAACTTTGTAGCAAGCATAGTTCCAGTCTAGCTGCCTGGCAGCCTGGCAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000567749.1 ENST00000652834.1 ENST00000657625.1 ENST00000663918.1 |
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| CDS GCA 72 bp | ATCCACACTAGAACAGGTGAAATCAAAAGACACATCTaGGTTGGCAAGCCTGCAGAGCAGGGGAACTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: IHTRTGEIKRHI*VGKPAEQGNSH Trigger: GTGAGAGTTCCCCTGCTCTGCAGGCTTGCCAACGCAGATGTGTCTTTTGATTTCACCTGTTCTAGTGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656726.1 |
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| CDS CAA 72 bp | ACCTCTGCTTCTACGGCCACATCTCCGTCTCTGACTTaGGTCTTTCTGCTTCCCTCTAATGAGGACTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: TSASTATSPSLT*VFLLPSNEDSF Trigger: AAAGGAGTCCTCATTAGAGGGAAGCAGAAAGACCAAAGTCAGAGACGGAGATGTGGCCGTAGAAGCAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567749.1 ENST00000657625.1 |
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| CDS CAA 90 bp | AATAATATCCTGCCAGGCTGCCAGGCAGCTAGACTGGAACTATGCTaGCTACAAAGTTATTTCCAGACAGACTGTGAGCACACTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: NNILPGCQAARLELC*LQSYFQTDCEHTVP Trigger: AGGCACAGTGTGCTCACAGTCTGTCTGGAAATAACTTTGTAGCAAGCATAGTTCCAGTCTAGCTGCCTGGCAGCCTGGCAGGATATTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000567749.1 ENST00000652834.1 ENST00000657625.1 ENST00000663918.1 |
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| CDS CAA 90 bp | AGCACATGGACCTCTGCTTCTACGGCCACATCTCCGTCTCTGACTTaGGTCTTTCTGCTTCCCTCTAATGAGGACTCCTTTGAGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: STWTSASTATSPSLT*VFLLPSNEDSFEYF Trigger: AAAATACTCAAAGGAGTCCTCATTAGAGGGAAGCAGAAAGACCAAAGTCAGAGACGGAGATGTGGCCGTAGAAGCAGAGGTCCATGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567749.1 ENST00000657625.1 |
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| CDS TCA 72 bp | CTCAGTGTTGACCCAAAAGGCAGAGGCTTCCTCAGATaGAAGCTCTTTAGGTTTTGCATCAGGAACCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSVDPKGRGFLR*KLFRFCIRNLL Trigger: AAGGAGGTTCCTGATGCAAAACCTAAAGAGCTTTCATCTGAGGAAGCCTCTGCCTTTTGGGTCAACACTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000652834.1 ENST00000663918.1 |
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| CDS CCA 72 bp | AGAGCCATGGAGTTGATCTGCCTCACAGCCTCTAGTTaGAACTCATCCCGTCAATACCTTGATTTTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: RAMELICLTASS*NSSRQYLDFAL Trigger: AAGTGCAAAATCAAGGTATTGACGGGATGAGTTCCAACTAGAGGCTGTGAGGCAGATCAACTCCATGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000567749.1 ENST00000656726.1 ENST00000656801.1 ENST00000662934.1 ENST00000664173.1 ENST00000668237.1 ENST00000670355.1 |
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| CDS CAA 90 bp | GAAGGTGCGATACATCAGGTTAAGAAGCTTGCTTCTATTCCTAGTTaGCAGAAAATAGTGACAGAGGTCCGATGTCCACAGTCAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: EGAIHQVKKLASIPS*QKIVTEVRCPQSVS Trigger: GGAGACTGACTGTGGACATCGGACCTCTGTCACTATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTATCGCACCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000567749.1 ENST00000652814.1 ENST00000657625.1 |
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| CDS TCA 72 bp | AACCCAGGAGAATCTCCCCATCTCAACATCCTTAGTTaGATCACATCTGCAAAGTCCCTTTTGCCAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: NPGESPHLNILS*ITSAKSLLPGK Trigger: CTTACCTGGCAAAAGGGACTTTGCAGATGTGATTCAACTAAGGATGTTGAGATGGGGAGATTCTCCTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000652814.1 ENST00000656726.1 ENST00000662934.1 |
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| CDS CCA 72 bp | CCCTTATTGTATTGGCTAGGACTTCCAGTACCATGTTaGATAGGAGTGATGAGAGTAAACATCCTTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PLLYWLGLPVPC*IGVMRVNILAW Trigger: CCAGGCAAGGATGTTTACTCTCATCACTCCTATCCAACATGGTACTGGAAGTCCTAGCCAATACAATAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657625.1 |
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| CDS CCA 72 bp | ATAATAATATCCTGCCAGGCTGCCAGGCAGCTAGACTaGAACTATGCTTGCTACAAAGTTATTTCCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: IIISCQAARQLD*NYACYKVISRQ Trigger: CTGTCTGGAAATAACTTTGTAGCAAGCATAGTTCCAGTCTAGCTGCCTGGCAGCCTGGCAGGATATTATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000567749.1 ENST00000652834.1 ENST00000657625.1 ENST00000663918.1 |
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| CDS CCA 72 bp | GTTACCAAAGTAAGAGAAGCTCACAGTGGATTAGAGTaGGCCCCATCTAGTCTAATGATTGCTGTCCTTAAC | + |
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Preference number: 6 (lower is better) Translates to: VTKVREAHSGLE*APSSLMIAVLN Trigger: GTTAAGGACAGCAATCATTAGACTAGATGGGGCCCACTCTAATCCACTGTGAGCTTCTCTTACTTTGGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000567749.1 ENST00000656726.1 ENST00000656801.1 ENST00000662934.1 ENST00000664173.1 ENST00000668237.1 ENST00000670355.1 |
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| CDS CAA 72 bp | TCCCTTATTGTATTGGCTAGGACTTCCAGTACCATGTaGGATAGGAGTGATGAGAGTAAACATCCTTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SLIVLARTSSTM*DRSDESKHPCL Trigger: CAGGCAAGGATGTTTACTCTCATCACTCCTATCCAACATGGTACTGGAAGTCCTAGCCAATACAATAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657625.1 |
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| CDS GCA 72 bp | TACATCAGGTTAAGAAGCTTGCTTCTATTCCTAGTTTaGAGAAAATCAAGTTCCTCAGAGGTCTCCACTCGC | + |
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Preference number: 6 (lower is better) Translates to: YIRLRSLLLFLV*RKSSSSEVSTR Trigger: GCGAGTGGAGACCTCTGAGGAACTTGATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664173.1 |
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| CDS CAA 72 bp | CTCTCAGAAGACAGTCCCAGAACATGGAATGTGACCTaGTTTGGAAATAGGGTCTTTGCAGATGTTACCAAA | + |
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Preference number: 6 (lower is better) Translates to: LSEDSPRTWNVT*FGNRVFADVTK Trigger: TTTGGTAACATCTGCAAAGACCCTATTTCCAAACAAGGTCACATTCCATGTTCTGGGACTGTCTTCTGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000567749.1 ENST00000656726.1 ENST00000656801.1 ENST00000662934.1 ENST00000664173.1 ENST00000668237.1 ENST00000670355.1 |
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| CDS CAA 72 bp | ATACATCAGGTTAAGAAGCTTGCTTCTATTCCTAGTTaGCAGAAAATAGTGACAGAGGTCCGATGTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: IHQVKKLASIPS*QKIVTEVRCPQ Trigger: CTGTGGACATCGGACCTCTGTCACTATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000567749.1 ENST00000652814.1 ENST00000657625.1 |
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| CDS CAA 72 bp | ATACATCAGGTTAAGAAGCTTGCTTCTATTCCTAGTTaGCAGAAAATCAAGTTCCTCAGAGGTCTCCACTCG | + |
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Preference number: 6 (lower is better) Translates to: IHQVKKLASIPS*QKIKFLRGLHS Trigger: CGAGTGGAGACCTCTGAGGAACTTGATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664173.1 |
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| CDS CAA 90 bp | TCATTTTCTTCCCTTATTGTATTGGCTAGGACTTCCAGTACCATGTaGGATAGGAGTGATGAGAGTAAACATCCTTGCCTGGTTCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: SFSSLIVLARTSSTM*DRSDESKHPCLVLN Trigger: ATTGAGAACCAGGCAAGGATGTTTACTCTCATCACTCCTATCCAACATGGTACTGGAAGTCCTAGCCAATACAATAAGGGAAGAAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657625.1 |
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| CDS CAA 90 bp | TTTGCTGTAGGCTTTTTGAAGGTGCGATACATCAGGTTAAGAAGCTaGCTTCTATTCCTAGTTTGCAGAAAATCTTCCTCAGATGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: FAVGFLKVRYIRLRS*LLFLVCRKSSSDES Trigger: GCTTTCATCTGAGGAAGATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTATCGCACCTTCAAAAAGCCTACAGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670355.1 |
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| CDS CAA 72 bp | GGCTTTTTGAAGGTGCGATACATCAGGTTAAGAAGCTaGCTTCTATTCCTAGTTTGCAGAAAATCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GFLKVRYIRLRS*LLFLVCRKSSS Trigger: TGAGGAAGATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTATCGCACCTTCAAAAAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670355.1 |
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| CDS GCA 72 bp | TACATCAGGTTAAGAAGCTTGCTTCTATTCCTAGTTTaGAGAAAATCTTTGAATCCTCAATCTCTGTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: YIRLRSLLLFLV*RKSLNPQSLLH Trigger: GTGCAACAGAGATTGAGGATTCAAAGATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662934.1 |
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| CDS GCA 72 bp | TACATCAGGTTAAGAAGCTTGCTTCTATTCCTAGTTTaGAGAAAATCTTCCTCAGATGAAAGCTCTTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: YIRLRSLLLFLV*RKSSSDESSLG Trigger: ACCTAAAGAGCTTTCATCTGAGGAAGATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670355.1 |
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| CDS CAA 72 bp | GGCTTTTTGAAGGTGCGATACATCAGGTTAAGAAGCTaGCTTCTATTCCTAGTTTGCAGAAAATCTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: GFLKVRYIRLRS*LLFLVCRKSLN Trigger: ATTCAAAGATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTATCGCACCTTCAAAAAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662934.1 |
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| CDS CAA 72 bp | ATACATCAGGTTAAGAAGCTTGCTTCTATTCCTAGTTaGCAGAAAATCTTTGAATCCTCAATCTCTGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: IHQVKKLASIPS*QKIFESSISVA Trigger: TGCAACAGAGATTGAGGATTCAAAGATTTTCTGCAAACTAGGAATAGAAGCAAGCTTCTTAACCTGATGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662934.1 |
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