Pregenerated sensors for LINC02366 (Homo sapiens)
Ensembl gene IDs: ENSG00000256888Ensembl transcript IDs: ENST00000540188.2, ENST00000541949.6, ENST00000656544.1, ENST00000656609.1, ENST00000656813.1, ENST00000660451.1, ENST00000665090.1, ENST00000667977.1, ENST00000668788.1, ENST00000669563.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGGGCGCCCACAAGAGCAGCAGAGATTTACTGGAACCGATTTACTaGAAATCCCCGTTTTCATTTCCCGGTCTGAGTTTCATTACCCAA | + |
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Preference number: 5 (lower is better) Translates to: EGAHKSSRDLLEPIY*KSPFSFPGLSFITQ Trigger: TTGGGTAATGAAACTCAGACCGGGAAATGAAAACGGGGATTTTCAGTAAATCGGTTCCAGTAAATCTCTGCTGCTCTTGTGGGCGCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000656609.1 ENST00000665090.1 ENST00000667977.1 ENST00000668788.1 ENST00000669563.1 |
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| CDS GCA 90 bp | TGTATGTATTGGGTGCCTACTGTGTATTCCAGAGTTGTCAGCACTTaGCATTGCGCATCCTGGTCTTCCCAACCACCATTTTCTTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: CMYWVPTVYSRVVST*HCASWSSQPPFSWF Trigger: AAACCAAGAAAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 |
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| CDS CCA 90 bp | AATCCACAGGGTGGCGATAACACTGAACGGAATGTGAATTCAGAGTaGAAATTCTCAGAAACCGTATTCTTCAACGGCCAGTGTTTACAG | + |
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Preference number: 5 (lower is better) Translates to: NPQGGDNTERNVNSE*KFSETVFFNGQCLQ Trigger: CTGTAAACACTGGCCGTTGAAGAATACGGTTTCTGAGAATTTCCACTCTGAATTCACATTCCGTTCAGTGTTATCGCCACCCTGTGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000540188.2 ENST00000541949.6 ENST00000656813.1 |
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| CDS GCA 90 bp | ACAGACAGCTTTAATTCATTCATTTACTCCCTTGTATGTATTGGGTaGCTACTGTGTATTCCAGAGTTGTCAGCACTTGCCATTGCGCAT | + |
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Preference number: 5 (lower is better) Translates to: TDSFNSFIYSLVCIG*LLCIPELSALAIAH Trigger: ATGCGCAATGGCAAGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAAGCTGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 |
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| CDS GCA 90 bp | ACAGACAGCTTTAATTCATTCATTTACTCCCTTGTATGTATTGGGTaGCTACTGTGTATTCCAGAGTTGTCAGCACACACTTTTCGTGGA | + |
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Preference number: 5 (lower is better) Translates to: TDSFNSFIYSLVCIG*LLCIPELSAHTFRG Trigger: TCCACGAAAAGTGTGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAAGCTGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000541949.6 ENST00000669563.1 |
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| CDS CCA 90 bp | TGGGTGCCTACTGTGTATTCCAGAGTTGTCAGCACACACTTTTCGTaGAGGAGCTATACATATTACAATGTTTTCTTTCATCAGTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: WVPTVYSRVVSTHFS*RSYTYYNVFFHQSD Trigger: ATCAGACTGATGAAAGAAAACATTGTAATATGTATAGCTCCTCCACGAAAAGTGTGTGCTGACAACTCTGGAATACACAGTAGGCACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000541949.6 ENST00000669563.1 |
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| CDS GCA 72 bp | AACCAAAAGAATGAAGAACGGTGCTCATTCCTCCGGTaGTCAAAAGAGGGCGCCCACAAGAGCAGCAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: NQKNEERCSFLR*SKEGAHKSSRD Trigger: ATCTCTGCTGCTCTTGTGGGCGCCCTCTTTTGAGCACCGGAGGAATGAGCACCGTTCTTCATTCTTTTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000656609.1 ENST00000665090.1 ENST00000667977.1 ENST00000668788.1 ENST00000669563.1 |
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| CDS GCA 72 bp | TGGGTGCCTACTGTGTATTCCAGAGTTGTCAGCACTTaGCATTGCGCATCCTGGTCTTCCCAACCACCATTT | + |
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Preference number: 6 (lower is better) Translates to: WVPTVYSRVVST*HCASWSSQPPF Trigger: AAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGTGCTGACAACTCTGGAATACACAGTAGGCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 |
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| CDS CAA 72 bp | TTGGGTGCCTACTGTGTATTCCAGAGTTGTCAGCACTaGCCATTGCGCATCCTGGTCTTCCCAACCACCATT | + |
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Preference number: 6 (lower is better) Translates to: LGAYCVFQSCQH*PLRILVFPTTI Trigger: AATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGTGCTGACAACTCTGGAATACACAGTAGGCACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 |
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| CDS CAA 72 bp | GCCTACTGTGTATTCCAGAGTTGTCAGCACTTGCCATaGCGCATCCTGGTCTTCCCAACCACCATTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: AYCVFQSCQHLP*RILVFPTTIFL Trigger: CAAGAAAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGTGCTGACAACTCTGGAATACACAGTAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 |
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| CDS CAA 72 bp | CTTGTATGTATTGGGTGCCTACTGTGTATTCCAGAGTaGTCAGCACTTGCCATTGCGCATCCTGGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LVCIGCLLCIPE*SALAIAHPGLP Trigger: GGGAAGACCAGGATGCGCAATGGCAAGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 |
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| CDS CAA 90 bp | TTGTATGTATTGGGTGCCTACTGTGTATTCCAGAGTTGTCAGCACTaGCCATTGCGCATCCTGGTCTTCCCAACCACCATTTTCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LYVLGAYCVFQSCQH*PLRILVFPTTIFLV Trigger: AACCAAGAAAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 |
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| CDS CAA 72 bp | TCATTTACTCCCTTGTATGTATTGGGTGCCTTGCCATaGCGCATCCTGGTCTTCCCAACCACCATTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SFTPLYVLGALP*RILVFPTTIFL Trigger: CAAGAAAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGGCACCCAATACATACAAGGGAGTAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656544.1 ENST00000665090.1 |
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| CDS CAA 72 bp | TTTACTCCCTTGTATGTATTGGGTGCCTACTTGCCATaGCGCATCCTGGTCTTCCCAACCACCATTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FTPLYVLGAYLP*RILVFPTTIFL Trigger: CAAGAAAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGTAGGCACCCAATACATACAAGGGAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656609.1 |
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| CDS CAA 72 bp | CATTCATTTACTCCCTTGTATGTATTGGGTGCCTACTaGCCATTGCGCATCCTGGTCTTCCCAACCACCATT | + |
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Preference number: 6 (lower is better) Translates to: HSFTPLYVLGAY*PLRILVFPTTI Trigger: AATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGTAGGCACCCAATACATACAAGGGAGTAAATGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656609.1 |
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| CDS GCA 72 bp | TTCATTCATTTACTCCCTTGTATGTATTGGGTGCCTTaGCATTGCGCATCCTGGTCTTCCCAACCACCATTT | + |
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Preference number: 6 (lower is better) Translates to: FIHLLPCMYWVP*HCASWSSQPPF Trigger: AAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGGCACCCAATACATACAAGGGAGTAAATGAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656544.1 ENST00000665090.1 |
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| CDS GCA 72 bp | ATTCATTTACTCCCTTGTATGTATTGGGTGCCTACTTaGCATTGCGCATCCTGGTCTTCCCAACCACCATTT | + |
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Preference number: 6 (lower is better) Translates to: IHLLPCMYWVPT*HCASWSSQPPF Trigger: AAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGTAGGCACCCAATACATACAAGGGAGTAAATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656609.1 |
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| CDS TCA 72 bp | CACAAGAGCAGCAGAGATTTACTGGAACCGATTTACTaGAAATCCCCGTTTTCATTTCCCGGTCTGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: HKSSRDLLEPIY*KSPFSFPGLSF Trigger: GAAACTCAGACCGGGAAATGAAAACGGGGATTTTCAGTAAATCGGTTCCAGTAAATCTCTGCTGCTCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000656609.1 ENST00000665090.1 ENST00000667977.1 ENST00000668788.1 ENST00000669563.1 |
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| CDS GCA 72 bp | TTTAATTCATTCATTTACTCCCTTGTATGTATTGGGTaGCTTGCCATTGCGCATCCTGGTCTTCCCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: FNSFIYSLVCIG*LAIAHPGLPNH Trigger: GTGGTTGGGAAGACCAGGATGCGCAATGGCAAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656544.1 ENST00000665090.1 |
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| CDS CAA 72 bp | CTTGTATGTATTGGGTGCCTACTGTGTATTCCAGAGTaGTCAGCACACACTTTTCGTGGAGGAGCTATACAT | + |
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Preference number: 6 (lower is better) Translates to: LVCIGCLLCIPE*SAHTFRGGAIH Trigger: ATGTATAGCTCCTCCACGAAAAGTGTGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000541949.6 ENST00000669563.1 |
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| CDS CAA 72 bp | ACAGCTTTAATTCATTCATTTACTCCCTTGTATGTATaGGGTGCCTTGCCATTGCGCATCCTGGTCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TALIHSFTPLYV*GALPLRILVFP Trigger: TGGGAAGACCAGGATGCGCAATGGCAAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAAGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656544.1 ENST00000665090.1 |
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| CDS CAA 90 bp | ACAGCTTTAATTCATTCATTTACTCCCTTGTATGTATTGGGTGCCTaGCCATTGCGCATCCTGGTCTTCCCAACCACCATTTTCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: TALIHSFTPLYVLGA*PLRILVFPTTIFLV Trigger: AACCAAGAAAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656544.1 ENST00000665090.1 |
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| CDS CAA 90 bp | GCTTTAATTCATTCATTTACTCCCTTGTATGTATTGGGTGCCTACTaGCCATTGCGCATCCTGGTCTTCCCAACCACCATTTTCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: ALIHSFTPLYVLGAY*PLRILVFPTTIFLV Trigger: AACCAAGAAAATGGTGGTTGGGAAGACCAGGATGCGCAATGGCAAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656609.1 |
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| CDS GCA 72 bp | TTTAATTCATTCATTTACTCCCTTGTATGTATTGGGTaGCTACTTGCCATTGCGCATCCTGGTCTTCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: FNSFIYSLVCIG*LLAIAHPGLPN Trigger: GTTGGGAAGACCAGGATGCGCAATGGCAAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656609.1 |
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| CDS CAA 72 bp | ACAGCTTTAATTCATTCATTTACTCCCTTGTATGTATaGGGTGCCTACTTGCCATTGCGCATCCTGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TALIHSFTPLYV*GAYLPLRILVF Trigger: GAAGACCAGGATGCGCAATGGCAAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAAGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656609.1 |
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| CDS CAA 90 bp | CAGATACAGACAGCTTTAATTCATTCATTTACTCCCTTGTATGTATaGGGTGCCTACTGTGTATTCCAGAGTTGTCAGCACTTGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: QIQTALIHSFTPLYV*GAYCVFQSCQHLPL Trigger: CAATGGCAAGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAAGCTGTCTGTATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 |
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| CDS CAA 90 bp | CAGATACAGACAGCTTTAATTCATTCATTTACTCCCTTGTATGTATaGGGTGCCTACTGTGTATTCCAGAGTTGTCAGCACACACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QIQTALIHSFTPLYV*GAYCVFQSCQHTLF Trigger: GAAAAGTGTGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAAGCTGTCTGTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000541949.6 ENST00000669563.1 |
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| CDS GCA 72 bp | TTTAATTCATTCATTTACTCCCTTGTATGTATTGGGTaGCTACTGTGTATTCCAGAGTTGTCAGCACTTGCC | + |
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Preference number: 6 (lower is better) Translates to: FNSFIYSLVCIG*LLCIPELSALA Trigger: GGCAAGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 |
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| CDS CAA 72 bp | ACAGCTTTAATTCATTCATTTACTCCCTTGTATGTATaGGGTGCCTACTGTGTATTCCAGAGTTGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: TALIHSFTPLYV*GAYCVFQSCQH Trigger: GTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAAGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000541949.6 ENST00000656813.1 ENST00000660451.1 ENST00000667977.1 ENST00000669563.1 |
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| CDS CAA 90 bp | ATTTATACAAGGAATGCCAGAACAATAGGTGGAAATCTTAGATTGTaGCTTAGAGGCCTGTTTGCCCAGATGGGGTCTAAATTTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: IYTRNARTIGGNLRL*LRGLFAQMGSKFLL Trigger: CAAAAGAAATTTAGACCCCATCTGGGCAAACAGGCCTCTAAGCAACAATCTAAGATTTCCACCTATTGTTCTGGCATTCCTTGTATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540188.2 ENST00000541949.6 ENST00000656544.1 ENST00000656609.1 ENST00000656813.1 ENST00000665090.1 ENST00000667977.1 ENST00000668788.1 ENST00000669563.1 |
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| CDS GCA 72 bp | TTTAATTCATTCATTTACTCCCTTGTATGTATTGGGTaGCTACTGTGTATTCCAGAGTTGTCAGCACACACT | + |
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Preference number: 6 (lower is better) Translates to: FNSFIYSLVCIG*LLCIPELSAHT Trigger: AGTGTGTGCTGACAACTCTGGAATACACAGTAGGCACCCAATACATACAAGGGAGTAAATGAATGAATTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000541949.6 ENST00000669563.1 |
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| CDS CAA 72 bp | CCATCCAATATTTATGCCTTGGATTGTGGAGGTGAATaGAAAAATACAGGGCCAATCATAAGAGGATGTATG | + |
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Preference number: 6 (lower is better) Translates to: PSNIYALDCGGE*KNTGPIIRGCM Trigger: CATACATCCTCTTATGATTGGCCCTGTATTTTTCAATTCACCTCCACAATCCAAGGCATAAATATTGGATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000540188.2 ENST00000541949.6 ENST00000656544.1 ENST00000656609.1 ENST00000656813.1 ENST00000665090.1 ENST00000667977.1 ENST00000668788.1 ENST00000669563.1 |
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| CDS CCA 72 bp | ACTGTGTATTCCAGAGTTGTCAGCACACACTTTTCGTaGAGGAGCTATACATATTACAATGTTTTCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: TVYSRVVSTHFS*RSYTYYNVFFH Trigger: ATGAAAGAAAACATTGTAATATGTATAGCTCCTCCACGAAAAGTGTGTGCTGACAACTCTGGAATACACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000541949.6 ENST00000669563.1 |
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| CDS TCA 72 bp | CAATTGGAATGTAGTATAGGACGTCTAAATTGTGGATaGTCAGCAGATACAGACAGCTTTAATTCATTCATT | + |
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Preference number: 6 (lower is better) Translates to: QLECSIGRLNCG*SADTDSFNSFI Trigger: AATGAATGAATTAAAGCTGTCTGTATCTGCTGATCATCCACAATTTAGACGTCCTATACTACATTCCAATTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000541949.6 ENST00000656544.1 ENST00000656609.1 ENST00000656813.1 ENST00000665090.1 ENST00000667977.1 ENST00000669563.1 |
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