Pregenerated sensors for LINC02363 (Homo sapiens)
Ensembl gene IDs: ENSG00000180712Ensembl transcript IDs: ENST00000317596.3, ENST00000511465.1, ENST00000664357.1, ENST00000670015.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCCGAGTACCCAAGGCAGCCATGCTGTGAGGGAGGCCACAGTGCCTaGGGAGGACCAGGATGGACGCTGCAGTCAGCGGACCTCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: SEYPRQPCCEGGHSA*GGPGWTLQSADLIL Trigger: GAGGATGAGGTCCGCTGACTGCAGCGTCCATCCTGGTCCTCCCCAGGCACTGTGGCCTCCCTCACAGCATGGCTGCCTTGGGTACTCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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| CDS TCA 90 bp | TCTGTCTTGCTGGGGCATTTGCTCTCGGAGCCCTGGCCTTCCACGTaGAGTCCGAGTACCCAAGGCAGCCATGCTGTGAGGGAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SVLLGHLLSEPWPST*SPSTQGSHAVREAT Trigger: TGTGGCCTCCCTCACAGCATGGCTGCCTTGGGTACTCGGACTTCACGTGGAAGGCCAGGGCTCCGAGAGCAAATGCCCCAGCAAGACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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| CDS CCA 90 bp | CATGGCACACATTCATACACAGGAGGCCTGGATCTCTGTGGGCGCTaGGGTGTGTGTGCACCGAAGGTCCACCTGGCCTGTAGTTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: HGTHSYTGGLDLCGR*GVCAPKVHLACSWY Trigger: ATACCAACTACAGGCCAGGTGGACCTTCGGTGCACACACACCCCAGCGCCCACAGAGATCCAGGCCTCCTGTGTATGAATGTGTGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 90 bp | TGGATCTCTGTGGGCGCTGGGGTGTGTGTGCACCGAAGGTCCACCTaGCCTGTAGTTGGTATGTCGATGAGGCCTTTTCCCTCTCAATGT | + |
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Preference number: 5 (lower is better) Translates to: WISVGAGVCVHRRST*PVVGMSMRPFPSQC Trigger: ACATTGAGAGGGAAAAGGCCTCATCGACATACCAACTACAGGCCAGGTGGACCTTCGGTGCACACACACCCCAGCGCCCACAGAGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 90 bp | CCTCCAATGCAGGTGAGATCTGCTGCTTTCAGGGCCTGCACAAGATaGCCACTTGGATGGAGGATGAGGAATAGAGAGCCCGGAAGGCGA | + |
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Preference number: 5 (lower is better) Translates to: PPMQVRSAAFRACTR*PLGWRMRNREPGRR Trigger: TCGCCTTCCGGGCTCTCTATTCCTCATCCTCCATCCAAGTGGCCATCTTGTGCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 90 bp | GCGTCTTCTTTCTTCTTCATGTGGCGTCTCATCCTCCAATGCAGGTaGGATCTGCTGCTTTCAGGGCCTGAAGTCCCATGGGGTCCCACG | + |
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Preference number: 5 (lower is better) Translates to: ASSFFFMWRLILQCR*DLLLSGPEVPWGPT Trigger: CGTGGGACCCCATGGGACTTCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGAAGAAGAAAGAAGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511465.1 |
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| CDS TCA 90 bp | CAGCTCCGGTCTGCAGCTCCCAGCCTGATCGACGCAGAAGACAGGTaGTTTCTGCATTTCCAAATCTCTGGAAGGTGGTACTGCGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: QLRSAAPSLIDAEDR*FLHFQISGRWYCAA Trigger: AGCAGCGCAGTACCACCTTCCAGAGATTTGGAAATGCAGAAATCACCTGTCTTCTGCGTCGATCAGGCTGGGAGCTGCAGACCGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664357.1 |
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| CDS GCA 90 bp | GCGTCTCATCCTCCAATGCAGGTGAGATCTGCTGCTTTCAGGGCCTaGACAAGATGGCCACTTGGATGGAGGATGAGGAATAGAGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: ASHPPMQVRSAAFRA*TRWPLGWRMRNREP Trigger: GGGCTCTCTATTCCTCATCCTCCATCCAAGTGGCCATCTTGTGCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 90 bp | GAGATCTGCTGCTTTCAGGGCCTGAAGTCCCATGGGGTCCCACGCTaGGCTTTGTCCATGACATTCACAGTGTTCACACACCTCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: EICCFQGLKSHGVPR*ALSMTFTVFTHLRP Trigger: TGGTCTGAGGTGTGTGAACACTGTGAATGTCATGGACAAAGCTCAGCGTGGGACCCCATGGGACTTCAGGCCCTGAAAGCAGCAGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511465.1 |
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| CDS TCA 90 bp | CCAAGATGGCCGAATAGGAACAGCTCCGGTCTGCAGCTCCCAGCCTaGTCGACGCAGAAGACAGGTGATTTCTGCATTTCCAAATCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PRWPNRNSSGLQLPA*STQKTGDFCISKSL Trigger: CAGAGATTTGGAAATGCAGAAATCACCTGTCTTCTGCGTCGATCAGGCTGGGAGCTGCAGACCGGAGCTGTTCCTATTCGGCCATCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664357.1 |
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| CDS GCA 90 bp | TCTTCTTCATGTGGCGTCTCATCCTCCAATGCAGGTGAGATCTGCTaGTTTCAGGGCCTGCACAAGATGGCCACTTGGATGGAGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: SSSCGVSSSNAGEIC*FQGLHKMATWMEDE Trigger: CTCATCCTCCATCCAAGTGGCCATCTTGTGCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGAAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 90 bp | GTGAGATCTGCTGCTTTCAGGGCCTGCACAAGATGGCCACTTGGATaGAGGATGAGGAATAGAGAGCCCGGAAGGCGAGAAATAGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: VRSAAFRACTRWPLG*RMRNREPGRREIGL Trigger: TAGACCTATTTCTCGCCTTCCGGGCTCTCTATTCCTCATCCTCCATCCAAGTGGCCATCTTGTGCAGGCCCTGAAAGCAGCAGATCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 90 bp | GCGTCTTCTTTCTTCTTCATGTGGCGTCTCATCCTCCAATGCAGGTaGGATCTGCTGCTTTCAGGGCCTGCACAAGATGGCCACTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: ASSFFFMWRLILQCR*DLLLSGPAQDGHLD Trigger: ATCCAAGTGGCCATCTTGTGCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGAAGAAGAAAGAAGACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS GCA 90 bp | GCTGAACAAAAGGAAATATGGTGTGATCCACAAAGAGTCGGTGATTaGTCGGTGGCTGAAGCTGCTGTGATACTTGCTGCTCCACGGCCG | + |
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Preference number: 5 (lower is better) Translates to: AEQKEIWCDPQRVGD*SVAEAAVILAAPRP Trigger: CGGCCGTGGAGCAGCAAGTATCACAGCAGCTTCAGCCACCGAGCAATCACCGACTCTTTGTGGATCACACCATATTTCCTTTTGTTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS TCA 90 bp | GTGATCCACAAAGAGTCGGTGATTGCTCGGTGGCTGAAGCTGCTGTaGTACTTGCTGCTCCACGGCCGTTATTGGAAATCTTTCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VIHKESVIARWLKLL*YLLLHGRYWKSFRK Trigger: CTTCCTGAAAGATTTCCAATAACGGCCGTGGAGCAGCAAGTATCACAGCAGCTTCAGCCACCGAGCAATCACCGACTCTTTGTGGATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS CCA 90 bp | ATGAGGAATAGAGAGCCCGGAAGGCGAGAAATAGGTCTAAATTCATaGCACACATTCATACACAGGAGGCCTGGATCTCTGTGGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: MRNREPGRREIGLNS*HTFIHRRPGSLWAL Trigger: CAGCGCCCACAGAGATCCAGGCCTCCTGTGTATGAATGTGTGCCATGAATTTAGACCTATTTCTCGCCTTCCGGGCTCTCTATTCCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 90 bp | ATAATTCTGTGGGTTAGCTGGGCAGCTTCCCTCTCTAGTTTTGCCTaGCCTGCTCATGCATTGCATTCAGGGAAAGCAGCTGGGCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: IILWVSWAASLSSFA*PAHALHSGKAAGLE Trigger: TTCTAGCCCAGCTGCTTTCCCTGAATGCAATGCATGAGCAGGCCAGGCAAAACTAGAGAGGGAAGCTGCCCAGCTAACCCACAGAATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000317596.3 ENST00000511465.1 ENST00000670015.1 |
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| CDS GCA 90 bp | CAGGTGATTTCTGCATTTCCAAATCTCTGGAAGGTGGTACTGCGCTaGTGTCTGTGGCGTCTTCTTTCTTCTTCATGTGGCGTCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: QVISAFPNLWKVVLR*CLWRLLSSSCGVSS Trigger: GGATGAGACGCCACATGAAGAAGAAAGAAGACGCCACAGACAGCAGCGCAGTACCACCTTCCAGAGATTTGGAAATGCAGAAATCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664357.1 |
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| CDS CCA 90 bp | CCTGATCGACGCAGAAGACAGGTGATTTCTGCATTTCCAAATCTCTaGAAGGTGGTACTGCGCTGCTGTCTGTGGCGTCTTCTTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PDRRRRQVISAFPNL*KVVLRCCLWRLLSS Trigger: AGAAGAAAGAAGACGCCACAGACAGCAGCGCAGTACCACCTTCCAGAGATTTGGAAATGCAGAAATCACCTGTCTTCTGCGTCGATCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664357.1 |
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| CDS GCA 90 bp | TCTTCTTCATGTGGCGTCTCATCCTCCAATGCAGGTGAGATCTGCTaGTTTCAGGGCCTTATAAACGTGTATACTGGACAGTGTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: SSSCGVSSSNAGEIC*FQGLINVYTGQCPV Trigger: GACTGGACACTGTCCAGTATACACGTTTATAAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGAAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS TCA 90 bp | GCGTCTTCTTTCTTCTTCATGTGGCGTCTCATCCTCCAATGCAGGTaGGATCTGCTGCTTTCAGGGCCTTATAAACGTGTATACTGGACA | + |
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Preference number: 5 (lower is better) Translates to: ASSFFFMWRLILQCR*DLLLSGPYKRVYWT Trigger: TGTCCAGTATACACGTTTATAAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGAAGAAGAAAGAAGACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS GCA 90 bp | CTTTCTTCTTCATGTGGCGTCTCATCCTCCAATGCAGGTGAGATCTaGTGCTTTCAGGGCCTTATAAACGTGTATACTGGACAGTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LSSSCGVSSSNAGEI*CFQGLINVYTGQCP Trigger: TGGACACTGTCCAGTATACACGTTTATAAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGAAGAAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS TCA 90 bp | CCCCTGAAAGCAGATTCAGGTGTGCTAGATGGTATTTTCCAAAGATaGAACCGTCACAGTATCTCCTACTCATGTGCTTCCAGAACTTCG | + |
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Preference number: 5 (lower is better) Translates to: PLKADSGVLDGIFQR*NRHSISYSCASRTS Trigger: CGAAGTTCTGGAAGCACATGAGTAGGAGATACTGTGACGGTTTCATCTTTGGAAAATACCATCTAGCACACCTGAATCTGCTTTCAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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| CDS TCA 90 bp | CTAAGTGCCTGTTACAAAAGGTCAGGCATCTTCAAGATGCTAAAATaGGTGAGGAAACTAGACTGGAAGGGATTAGGGAGGGAGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: LSACYKRSGIFKMLK*VRKLDWKGLGREAT Trigger: TGTTGCCTCCCTCCCTAATCCCTTCCAGTCTAGTTTCCTCACTCATTTTAGCATCTTGAAGATGCCTGACCTTTTGTAACAGGCACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 90 bp | CAACCTGGTTATTGGATGAGAAACCCAGTATTCCAGCTCACAGCTTaGTTATTGCCTCTTCTAAGTGCCTGTTACAAAAGGTCAGGCATC | + |
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Preference number: 5 (lower is better) Translates to: QPGYWMRNPVFQLTA*LLPLLSACYKRSGI Trigger: GATGCCTGACCTTTTGTAACAGGCACTTAGAAGAGGCAATAATCAAGCTGTGAGCTGGAATACTGGGTTTCTCATCCAATAACCAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 90 bp | AAAAGTCCCTTGTATGGTTACCAACCTGCCAACCTGGTTATTGGATaGGAAACCCAGTATTCCAGCTCACAGCTTGATTATTGCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: KSPLYGYQPANLVIG*ETQYSSSQLDYCLF Trigger: GAAGAGGCAATAATCAAGCTGTGAGCTGGAATACTGGGTTTCTCATCCAATAACCAGGTTGGCAGGTTGGTAACCATACAAGGGACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS GCA 90 bp | ACACTAATTCTCCAGTTTGAAAAGTCCCTTGTATGGTTACCAACCTaGCAACCTGGTTATTGGATGAGAAACCCAGTATTCCAGCTCACA | + |
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Preference number: 5 (lower is better) Translates to: TLILQFEKSLVWLPT*QPGYWMRNPVFQLT Trigger: TGTGAGCTGGAATACTGGGTTTCTCATCCAATAACCAGGTTGGCAGGTTGGTAACCATACAAGGGACTTTTCAAACTGGAGAATTAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 90 bp | TTTGTGCTCAGCACACTAATTCTCCAGTTTGAAAAGTCCCTTGTATaGTTACCAACCTGCCAACCTGGTTATTGGATGAGAAACCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: FVLSTLILQFEKSLV*LPTCQPGYWMRNPV Trigger: TACTGGGTTTCTCATCCAATAACCAGGTTGGCAGGTTGGTAACCATACAAGGGACTTTTCAAACTGGAGAATTAGTGTGCTGAGCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 90 bp | TCAAAATACTCACCACTTTGTGCTCAGCACACTAATTCTCCAGTTTaGAAAGTCCCTTGTATGGTTACCAACCTGCCAACCTGGTTATTG | + |
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Preference number: 5 (lower is better) Translates to: SKYSPLCAQHTNSPV*KVPCMVTNLPTWLL Trigger: CAATAACCAGGTTGGCAGGTTGGTAACCATACAAGGGACTTTTCAAACTGGAGAATTAGTGTGCTGAGCACAAAGTGGTGAGTATTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS GCA 90 bp | AAACCCAGTATTCCAGCTCACAGCTTGATTATTGCCTCTTCTAAGTaGCTGTTACAAAAGGTCAGGCATCTTCAAGATGCTAAAATGAGT | + |
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Preference number: 5 (lower is better) Translates to: KPSIPAHSLIIASSK*LLQKVRHLQDAKMS Trigger: ACTCATTTTAGCATCTTGAAGATGCCTGACCTTTTGTAACAGGCACTTAGAAGAGGCAATAATCAAGCTGTGAGCTGGAATACTGGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 72 bp | TGTGAGGGAGGCCACAGTGCCTGGGGAGGACCAGGATaGACGCTGCAGTCAGCGGACCTCATCCTCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: CEGGHSAWGGPG*TLQSADLILQC Trigger: GCACTGGAGGATGAGGTCCGCTGACTGCAGCGTCCATCCTGGTCCTCCCCAGGCACTGTGGCCTCCCTCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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| CDS GCA 72 bp | GCCTTCCACGTGAAGTCCGAGTACCCAAGGCAGCCATaGTGTGAGGGAGGCCACAGTGCCTGGGGAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: AFHVKSEYPRQP*CEGGHSAWGGP Trigger: TGGTCCTCCCCAGGCACTGTGGCCTCCCTCACAGCATGGCTGCCTTGGGTACTCGGACTTCACGTGGAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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| CDS CCA 72 bp | GTGGGCGCTGGGGTGTGTGTGCACCGAAGGTCCACCTaGCCTGTAGTTGGTATGTCGATGAGGCCTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: VGAGVCVHRRST*PVVGMSMRPFP Trigger: GGGAAAAGGCCTCATCGACATACCAACTACAGGCCAGGTGGACCTTCGGTGCACACACACCCCAGCGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 72 bp | CATTCATACACAGGAGGCCTGGATCTCTGTGGGCGCTaGGGTGTGTGTGCACCGAAGGTCCACCTGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: HSYTGGLDLCGR*GVCAPKVHLAC Trigger: ACAGGCCAGGTGGACCTTCGGTGCACACACACCCCAGCGCCCACAGAGATCCAGGCCTCCTGTGTATGAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS GCA 72 bp | TGTGGCGTCTCATCCTCCAATGCAGGTGAGATCTGCTaGTTTCAGGGCCTGAAGTCCCATGGGGTCCCACGC | + |
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Preference number: 6 (lower is better) Translates to: CGVSSSNAGEIC*FQGLKSHGVPR Trigger: GCGTGGGACCCCATGGGACTTCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511465.1 |
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| CDS GCA 72 bp | GCTTCTAGGTCATCAAAGGCGGCTGAGCTTCTGTCTTaGTGGGGCATTTGCTCTCGGAGCCCTGGCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASRSSKAAELLS*WGICSRSPGLP Trigger: TGGAAGGCCAGGGCTCCGAGAGCAAATGCCCCAGCAAGACAGAAGCTCAGCCGCCTTTGATGACCTAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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| CDS GCA 72 bp | TCATGTGGCGTCTCATCCTCCAATGCAGGTGAGATCTaGTGCTTTCAGGGCCTGAAGTCCCATGGGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SCGVSSSNAGEI*CFQGLKSHGVP Trigger: TGGGACCCCATGGGACTTCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511465.1 |
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| CDS CCA 72 bp | GCTGCTTTCAGGGCCTGCACAAGATGGCCACTTGGATaGAGGATGAGGAATAGAGAGCCCGGAAGGCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: AAFRACTRWPLG*RMRNREPGRRE Trigger: TTCTCGCCTTCCGGGCTCTCTATTCCTCATCCTCCATCCAAGTGGCCATCTTGTGCAGGCCCTGAAAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 72 bp | CCGAATAGGAACAGCTCCGGTCTGCAGCTCCCAGCCTaGTCGACGCAGAAGACAGGTGATTTCTGCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: PNRNSSGLQLPA*STQKTGDFCIS Trigger: GGAAATGCAGAAATCACCTGTCTTCTGCGTCGATCAGGCTGGGAGCTGCAGACCGGAGCTGTTCCTATTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664357.1 |
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| CDS GCA 72 bp | TGTGGCGTCTCATCCTCCAATGCAGGTGAGATCTGCTaGTTTCAGGGCCTGCACAAGATGGCCACTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: CGVSSSNAGEIC*FQGLHKMATWM Trigger: CATCCAAGTGGCCATCTTGTGCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS GCA 72 bp | TCATGTGGCGTCTCATCCTCCAATGCAGGTGAGATCTaGTGCTTTCAGGGCCTGCACAAGATGGCCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: SCGVSSSNAGEI*CFQGLHKMATW Trigger: CCAAGTGGCCATCTTGTGCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 72 bp | GGTGTGTGTGCACCGAAGGTCCACCTGGCCTGTAGTTaGTATGTCGATGAGGCCTTTTCCCTCTCAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: GVCAPKVHLACS*YVDEAFSLSMS Trigger: GGACATTGAGAGGGAAAAGGCCTCATCGACATACCAACTACAGGCCAGGTGGACCTTCGGTGCACACACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 72 bp | CATTCACAGTGTTCACACACCTCAGACCATCTCTTCTaGGATCTTCCTGGGAGGGCTGCCCCAGCAAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: HSQCSHTSDHLF*DLPGRAAPAKR Trigger: TCGCTTTGCTGGGGCAGCCCTCCCAGGAAGATCCCAGAAGAGATGGTCTGAGGTGTGTGAACACTGTGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511465.1 |
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| CDS TCA 72 bp | TGCTTTCAGGGCCTGAAGTCCCATGGGGTCCCACGCTaGGCTTTGTCCATGACATTCACAGTGTTCACACAC | + |
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Preference number: 6 (lower is better) Translates to: CFQGLKSHGVPR*ALSMTFTVFTH Trigger: GTGTGTGAACACTGTGAATGTCATGGACAAAGCTCAGCGTGGGACCCCATGGGACTTCAGGCCCTGAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511465.1 |
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| CDS GCA 72 bp | CCTCCAATGCAGGTGAGATCTGCTGCTTTCAGGGCCTaGACAAGATGGCCACTTGGATGGAGGATGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PPMQVRSAAFRA*TRWPLGWRMRN Trigger: ATTCCTCATCCTCCATCCAAGTGGCCATCTTGTGCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS GCA 72 bp | CGGTCACACTCACATCTCTGGAAGGTGGTACTGCGCTaGTGTCTGTGGCGTCTTCTTTCTTCTTCATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RSHSHLWKVVLR*CLWRLLSSSCG Trigger: GCCACATGAAGAAGAAAGAAGACGCCACAGACAGCAGCGCAGTACCACCTTCCAGAGATGTGAGTGTGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000317596.3 ENST00000511465.1 ENST00000670015.1 |
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| CDS TCA 72 bp | TTCTTCTTCATGTGGCGTCTCATCCTCCAATGCAGGTaGGATCTGCTGCTTTCAGGGCCTGCACAAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: FFFMWRLILQCR*DLLLSGPAQDG Trigger: GCCATCTTGTGCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGAAGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 72 bp | TTCTTCTTCATGTGGCGTCTCATCCTCCAATGCAGGTaGGATCTGCTGCTTTCAGGGCCTGAAGTCCCATGG | + |
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Preference number: 6 (lower is better) Translates to: FFFMWRLILQCR*DLLLSGPEVPW Trigger: CCATGGGACTTCAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGAAGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511465.1 |
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| CDS CAA 72 bp | TTCTGTGGGTTAGCTGGGCAGCTTCCCTCTCTAGTTTaGCCTGGCCTGCTCATGCATTGCATTCAGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: FCGLAGQLPSLV*PGLLMHCIQGK Trigger: CTTTCCCTGAATGCAATGCATGAGCAGGCCAGGCAAAACTAGAGAGGGAAGCTGCCCAGCTAACCCACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000317596.3 ENST00000511465.1 ENST00000670015.1 |
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| CDS CAA 90 bp | TCGGTGGCTGAAGCTGCTGTGATACTTGCTGCTCCACGGCCGTTATaGGAAATCTTTCAGGAAGCCGAGAAATTAAACTCCCACCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SVAEAAVILAAPRPL*EIFQEAEKLNSHQG Trigger: CCCTTGGTGGGAGTTTAATTTCTCGGCTTCCTGAAAGATTTCCAATAACGGCCGTGGAGCAGCAAGTATCACAGCAGCTTCAGCCACCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS TCA 72 bp | AAAGAGTCGGTGATTGCTCGGTGGCTGAAGCTGCTGTaGTACTTGCTGCTCCACGGCCGTTATTGGAAATCT | + |
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Preference number: 6 (lower is better) Translates to: KESVIARWLKLL*YLLLHGRYWKS Trigger: AGATTTCCAATAACGGCCGTGGAGCAGCAAGTATCACAGCAGCTTCAGCCACCGAGCAATCACCGACTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS CCA 72 bp | AAGGTCAAAGACGGTCACACTCACATCTCTGGAAGGTaGTACTGCGCTGCTGTCTGTGGCGTCTTCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KVKDGHTHISGR*YCAAVCGVFFL Trigger: AAGAAAGAAGACGCCACAGACAGCAGCGCAGTACCACCTTCCAGAGATGTGAGTGTGACCGTCTTTGACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000317596.3 ENST00000511465.1 ENST00000670015.1 |
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| CDS GCA 72 bp | AAAGACGGTCACACTCACATCTCTGGAAGGTGGTACTaGGCTGCTGTCTGTGGCGTCTTCTTTCTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: KDGHTHISGRWY*AAVCGVFFLLH Trigger: ATGAAGAAGAAAGAAGACGCCACAGACAGCAGCGCAGTACCACCTTCCAGAGATGTGAGTGTGACCGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000317596.3 ENST00000511465.1 ENST00000670015.1 |
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| CDS GCA 72 bp | TGTGGCGTCTCATCCTCCAATGCAGGTGAGATCTGCTaGTTTCAGGGCCTTATAAACGTGTATACTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: CGVSSSNAGEIC*FQGLINVYTGQ Trigger: CTGTCCAGTATACACGTTTATAAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS CCA 72 bp | AGAGAGCCCGGAAGGCGAGAAATAGGTCTAAATTCATaGCACACATTCATACACAGGAGGCCTGGATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: REPGRREIGLNS*HTFIHRRPGSL Trigger: CAGAGATCCAGGCCTCCTGTGTATGAATGTGTGCCATGAATTTAGACCTATTTCTCGCCTTCCGGGCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 72 bp | GATCTGCTGCTTTCAGGGCCTTATAAACGTGTATACTaGACAGTGTCCAGTCAGCAGAACGGAAACTACCCG | + |
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Preference number: 6 (lower is better) Translates to: DLLLSGPYKRVY*TVSSQQNGNYP Trigger: CGGGTAGTTTCCGTTCTGCTGACTGGACACTGTCCAGTATACACGTTTATAAGGCCCTGAAAGCAGCAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS GCA 72 bp | TCATGTGGCGTCTCATCCTCCAATGCAGGTGAGATCTaGTGCTTTCAGGGCCTTATAAACGTGTATACTGGA | + |
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Preference number: 6 (lower is better) Translates to: SCGVSSSNAGEI*CFQGLINVYTG Trigger: TCCAGTATACACGTTTATAAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS TCA 72 bp | TTCTTCTTCATGTGGCGTCTCATCCTCCAATGCAGGTaGGATCTGCTGCTTTCAGGGCCTTATAAACGTGTA | + |
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Preference number: 6 (lower is better) Translates to: FFFMWRLILQCR*DLLLSGPYKRV Trigger: TACACGTTTATAAGGCCCTGAAAGCAGCAGATCTCACCTGCATTGGAGGATGAGACGCCACATGAAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS CAA 72 bp | GAAGCTGCTGTGATACTTGCTGCTCCACGGCCGTTATaGGAAATCTTTCAGGAAGCCGAGAAATTAAACTCC | + |
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Preference number: 6 (lower is better) Translates to: EAAVILAAPRPL*EIFQEAEKLNS Trigger: GGAGTTTAATTTCTCGGCTTCCTGAAAGATTTCCAATAACGGCCGTGGAGCAGCAAGTATCACAGCAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670015.1 |
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| CDS TCA 72 bp | TCACCACTTTGTGCTCAGCACACTAATTCTCCAGTTTaGAAAGTCCCTTGTATGGTTACCAACCTGCCAACC | + |
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Preference number: 6 (lower is better) Translates to: SPLCAQHTNSPV*KVPCMVTNLPT Trigger: GGTTGGCAGGTTGGTAACCATACAAGGGACTTTTCAAACTGGAGAATTAGTGTGCTGAGCACAAAGTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 72 bp | GCAGATTCAGGTGTGCTAGATGGTATTTTCCAAAGATaGAACCGTCACAGTATCTCCTACTCATGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ADSGVLDGIFQR*NRHSISYSCAS Trigger: GGAAGCACATGAGTAGGAGATACTGTGACGGTTTCATCTTTGGAAAATACCATCTAGCACACCTGAATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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| CDS GCA 72 bp | CTCCAGTTTGAAAAGTCCCTTGTATGGTTACCAACCTaGCAACCTGGTTATTGGATGAGAAACCCAGTATTC | + |
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Preference number: 6 (lower is better) Translates to: LQFEKSLVWLPT*QPGYWMRNPVF Trigger: GAATACTGGGTTTCTCATCCAATAACCAGGTTGGCAGGTTGGTAACCATACAAGGGACTTTTCAAACTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS GCA 72 bp | ATTCCAGCTCACAGCTTGATTATTGCCTCTTCTAAGTaGCTGTTACAAAAGGTCAGGCATCTTCAAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: IPAHSLIIASSK*LLQKVRHLQDA Trigger: AGCATCTTGAAGATGCCTGACCTTTTGTAACAGGCACTTAGAAGAGGCAATAATCAAGCTGTGAGCTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CCA 72 bp | AGCACACTAATTCTCCAGTTTGAAAAGTCCCTTGTATaGTTACCAACCTGCCAACCTGGTTATTGGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: STLILQFEKSLV*LPTCQPGYWMR Trigger: TCTCATCCAATAACCAGGTTGGCAGGTTGGTAACCATACAAGGGACTTTTCAAACTGGAGAATTAGTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS TCA 72 bp | TATTGGATGAGAAACCCAGTATTCCAGCTCACAGCTTaGTTATTGCCTCTTCTAAGTGCCTGTTACAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: YWMRNPVFQLTA*LLPLLSACYKR Trigger: CCTTTTGTAACAGGCACTTAGAAGAGGCAATAATCAAGCTGTGAGCTGGAATACTGGGTTTCTCATCCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317596.3 |
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| CDS CAA 90 bp | GGTGGAGGAGACACTGATATAAGCAGCTTTCTTGGTCCTTTGCTTTaGTCGATCAATTTTCCAGGATTAGCTAAAATGCAGCCAGATTTA | + |
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Preference number: 6 (lower is better) Translates to: GGGDTDISSFLGPLL*SINFPGLAKMQPDL Trigger: TAAATCTGGCTGCATTTTAGCTAATCCTGGAAAATTGATCGACAAAAGCAAAGGACCAAGAAAGCTGCTTATATCAGTGTCTCCTCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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| CDS CAA 72 bp | GGAGGAGACACTGATATAAGCAGCTTTCTTGGTCCTTaGCTTTTGTCGATCAATTTTCCAGGATTAGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: GGDTDISSFLGP*LLSINFPGLAK Trigger: TTTAGCTAATCCTGGAAAATTGATCGACAAAAGCAAAGGACCAAGAAAGCTGCTTATATCAGTGTCTCCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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| CDS CAA 72 bp | GACACTGATATAAGCAGCTTTCTTGGTCCTTTGCTTTaGTCGATCAATTTTCCAGGATTAGCTAAAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: DTDISSFLGPLL*SINFPGLAKMQ Trigger: CTGCATTTTAGCTAATCCTGGAAAATTGATCGACAAAAGCAAAGGACCAAGAAAGCTGCTTATATCAGTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317596.3 ENST00000664357.1 |
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