Pregenerated sensors for LINC02361 (Homo sapiens)
Ensembl gene IDs: ENSG00000256576Ensembl transcript IDs: ENST00000538731.2, ENST00000671908.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGCCACGCGCCTGGGAGACCACACAGCCGGGAGCAGGACCAGTGTaGCCCGGGGACACTCCCCAAGCCGGGACTCGGCGACAGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EPRAWETTQPGAGPV*PGDTPQAGTRRQAR Trigger: CCGGGCCTGTCGCCGAGTCCCGGCTTGGGGAGTGTCCCCGGGCCACACTGGTCCTGCTCCCGGCTGTGTGGTCTCCCAGGCGCGTGGCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 90 bp | GCTGTGTCCGGTGCAGGCGCCGTCCTCTGGCTTCTCTGGGGTGTGTaGAGCGTCGACGCTGTCCCGGCGGGGCTCGGAGGGAACCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AVSGAGAVLWLLWGV*SVDAVPAGLGGNRP Trigger: CGGGCGGTTCCCTCCGAGCCCCGCCGGGACAGCGTCGACGCTGCACACACCCCAGAGAAGCCAGAGGACGGCGCCTGCACCGGACACAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 90 bp | TGGCTCACACCAGAGCCTGGGCCCCGGAGGGAGGAGCCACGCGCCTaGGAGACCACACAGCCGGGAGCAGGACCAGTGTGGCCCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WLTPEPGPRREEPRA*ETTQPGAGPVWPGD Trigger: GTCCCCGGGCCACACTGGTCCTGCTCCCGGCTGTGTGGTCTCCCAGGCGCGTGGCTCCTCCCTCCGGGGCCCAGGCTCTGGTGTGAGCCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 90 bp | TCGGCGACAGGCCCGGGGGCCTCAGGATGTCGACGGGCCTCGTGTTaGCCTCGCTGCGGCCGTCCTGGCTGTCCTGGCCTATGTCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SATGPGASGCRRASC*PRCGRPGCPGLCRA Trigger: AGCCCGACATAGGCCAGGACAGCCAGGACGGCCGCAGCGAGGGCAACACGAGGCCCGTCGACATCCTGAGGCCCCCGGGCCTGTCGCCGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 90 bp | CGGTGTTGCGCTGTGTCCGGTGCAGGCGCCGTCCTCTGGCTTCTCTaGGGTGTGTGCAGCGTCGACGCTGTCCCGGCGGGGCTCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RCCAVSGAGAVLWLL*GVCSVDAVPAGLGG Trigger: CCCTCCGAGCCCCGCCGGGACAGCGTCGACGCTGCACACACCCCAGAGAAGCCAGAGGACGGCGCCTGCACCGGACACAGCGCAACACCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 90 bp | GTGCTGTGCCGGTGTTGCGCTGTGTCCGGTGCAGGCGCCGTCCTCTaGCTTCTCTGGGGTGTGTGCAGCGTCGACGCTGTCCCGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLCRCCAVSGAGAVL*LLWGVCSVDAVPAG Trigger: CCCCGCCGGGACAGCGTCGACGCTGCACACACCCCAGAGAAGCCAGAGGACGGCGCCTGCACCGGACACAGCGCAACACCGGCACAGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 90 bp | CCACCTCCATCTCAGACCCCCGAGCTACCGGGCCAGGCTGCCTTCTaGATCCGTGGAGCCCCAGTGCCCGTGAGGGTGTCCAGGCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PPPSQTPELPGQAAF*IRGAPVPVRVSRPH Trigger: GTGAGGCCTGGACACCCTCACGGGCACTGGGGCTCCACGGATGCAGAAGGCAGCCTGGCCCGGTAGCTCGGGGGTCTGAGATGGAGGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 90 bp | ATCTCAGACCCCCGAGCTACCGGGCCAGGCTGCCTTCTGCATCCGTaGAGCCCCAGTGCCCGTGAGGGTGTCCAGGCCTCACCCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISDPRATGPGCLLHP*SPSAREGVQASPCG Trigger: CCCACAGGGTGAGGCCTGGACACCCTCACGGGCACTGGGGCTCCACGGATGCAGAAGGCAGCCTGGCCCGGTAGCTCGGGGGTCTGAGAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS TCA 90 bp | GGCCACAGCTCTTCCACCCTCGGGGAGGTGTTCTTCCCCCTCTGCTaGGCCTGCATGAAGACGCGTGCGCTCAGGCCGGCGTCTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHSSSTLGEVFFPLC*ACMKTRALRPASAV Trigger: CACTGCAGACGCCGGCCTGAGCGCACGCGTCTTCATGCAGGCTCAGCAGAGGGGGAAGAACACCTCCCCGAGGGTGGAAGAGCTGTGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 90 bp | ACAAGCACCGCGGCTGTACCAGCCTCTGAGTTCCGACTCGGGTCCTaGAGGTGTGGCTTCCTGGCGCACGCGGGCTCTCTGAGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSTAAVPASEFRLGS*RCGFLAHAGSLSSG Trigger: CCCTGAGCTCAGAGAGCCCGCGTGCGCCAGGAAGCCACACCTGCAGGACCCGAGTCGGAACTCAGAGGCTGGTACAGCCGCGGTGCTTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 90 bp | CTGCCTAGGCTCACTTGTGGTGTGGACGCTGTGCTGTGCCGGTGTTaGGCTGTGTCCGGTGCAGGCGCCGTCCTCTGGCTTCTCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRLTCGVDAVLCRC*AVSGAGAVLWLLWG Trigger: ACCCCAGAGAAGCCAGAGGACGGCGCCTGCACCGGACACAGCGCAACACCGGCACAGCACAGCGTCCACACCACAAGTGAGCCTAGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 90 bp | TCTTACTCCACCTCCATCTCAGACCCCCGAGCTACCGGGCCAGGCTaGCTTCTGCATCCGTGGAGCCCCAGTGCCCGTGAGGGTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SYSTSISDPRATGPG*LLHPWSPSAREGVQ Trigger: CTGGACACCCTCACGGGCACTGGGGCTCCACGGATGCAGAAGGCAGCCTGGCCCGGTAGCTCGGGGGTCTGAGATGGAGGTGGAGTAAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 90 bp | CCTGCGCTGCCTGTTCGCCTGTGTCCGTCTGTCCGTCCATCTGTCTaGTGGCCACAGCTCTTCCACCCTCGGGGAGGTGTTCTTCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PALPVRLCPSVRPSV*WPQLFHPRGGVLPP Trigger: AGGGGGAAGAACACCTCCCCGAGGGTGGAAGAGCTGTGGCCAGCAGACAGATGGACGGACAGACGGACACAGGCGAACAGGCAGCGCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 90 bp | TTCCTGGCGCACGCGGGCTCTCTGAGCTCAGGGAGGCTCCGAGCCTaGCTCCAGGACGCAGCCTTTGTCACTCTGTCTTACTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLAHAGSLSSGRLRA*LQDAAFVTLSYSTS Trigger: GGAGGTGGAGTAAGACAGAGTGACAAAGGCTGCGTCCTGGAGGCAGGCTCGGAGCCTCCCTGAGCTCAGAGAGCCCGCGTGCGCCAGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS TCA 90 bp | GGGCTTGAGTGGGGTGGCAGGTTCCGAGATGAGGAGGAACCGCACTaGGAAGCCTCCTCTGCATCCGAACCCGCCACCGGTCACAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLEWGGRFRDEEEPH*EASSASEPATGHRN Trigger: GTTCCTGTGACCGGTGGCGGGTTCGGATGCAGAGGAGGCTTCTCAGTGCGGTTCCTCCTCATCTCGGAACCTGCCACCCCACTCAAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 90 bp | CAGTGTAGACACAGCTGCCTAGGCTCACTTGTGGTGTGGACGCTGTaGTGTGCCGGTGTTGCGCTGTGTCCGGTGCAGGCGCCGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QCRHSCLGSLVVWTL*CAGVALCPVQAPSS Trigger: AGAGGACGGCGCCTGCACCGGACACAGCGCAACACCGGCACAGCACAGCGTCCACACCACAAGTGAGCCTAGGCAGCTGTGTCTACACTG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 90 bp | GACAAAGGCGTGAGCTGCAAGTATGGGCGTCTCCTATGGAAAAAGTaGCTCACACCAGAGCCTGGGCCCCGGAGGGAGGAGCCACGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DKGVSCKYGRLLWKK*LTPEPGPRREEPRA Trigger: GGCGCGTGGCTCCTCCCTCCGGGGCCCAGGCTCTGGTGTGAGCCACTTTTTCCATAGGAGACGCCCATACTTGCAGCTCACGCCTTTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS TCA 90 bp | GGCCATTCTTATCTACAGGACAAGCACCGCGGCTGTACCAGCCTCTaGGTTCCGACTCGGGTCCTGCAGGTGTGGCTTCCTGGCGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: GHSYLQDKHRGCTSL*VPTRVLQVWLPGAR Trigger: GCGTGCGCCAGGAAGCCACACCTGCAGGACCCGAGTCGGAACTCAGAGGCTGGTACAGCCGCGGTGCTTGTCCTGTAGATAAGAATGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 72 bp | GGTGCAGGCGCCGTCCTCTGGCTTCTCTGGGGTGTGTaGAGCGTCGACGCTGTCCCGGCGGGGCTCGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAGAVLWLLWGV*SVDAVPAGLGG Trigger: CCCTCCGAGCCCCGCCGGGACAGCGTCGACGCTGCACACACCCCAGAGAAGCCAGAGGACGGCGCCTGCACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 72 bp | CCAGAGCCTGGGCCCCGGAGGGAGGAGCCACGCGCCTaGGAGACCACACAGCCGGGAGCAGGACCAGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PEPGPRREEPRA*ETTQPGAGPVW Trigger: CCACACTGGTCCTGCTCCCGGCTGTGTGGTCTCCCAGGCGCGTGGCTCCTCCCTCCGGGGCCCAGGCTCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 72 bp | GCTGTGTCCGGTGCAGGCGCCGTCCTCTGGCTTCTCTaGGGTGTGTGCAGCGTCGACGCTGTCCCGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVSGAGAVLWLL*GVCSVDAVPAG Trigger: CCCCGCCGGGACAGCGTCGACGCTGCACACACCCCAGAGAAGCCAGAGGACGGCGCCTGCACCGGACACAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 72 bp | CCCCGAGCTACCGGGCCAGGCTGCCTTCTGCATCCGTaGAGCCCCAGTGCCCGTGAGGGTGTCCAGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRATGPGCLLHP*SPSAREGVQAS Trigger: TGAGGCCTGGACACCCTCACGGGCACTGGGGCTCCACGGATGCAGAAGGCAGCCTGGCCCGGTAGCTCGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 72 bp | CGGGTCCTGGCCCATTTGACCGGCTCGGCTCACCCCTaGGCTGCCTGTTCGCCTGTGTCCGTCTGTCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVLAHLTGSAHP*AACSPVSVCPS Trigger: GGACGGACAGACGGACACAGGCGAACAGGCAGCGCAGGGGTGAGCCGAGCCGGTCAAATGGGCCAGGACCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 72 bp | GCCTCAGGATGTCGACGGGCCTCGTGTTGCCCTCGCTaGGGCCGTCCTGGCTGTCCTGGCCTATGTCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASGCRRASCCPR*GRPGCPGLCRA Trigger: AGCCCGACATAGGCCAGGACAGCCAGGACGGCCGCAGCGAGGGCAACACGAGGCCCGTCGACATCCTGAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 72 bp | ACCTCCATCTCAGACCCCCGAGCTACCGGGCCAGGCTaGCTTCTGCATCCGTGGAGCCCCAGTGCCCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TSISDPRATGPG*LLHPWSPSARE Trigger: CTCACGGGCACTGGGGCTCCACGGATGCAGAAGGCAGCCTGGCCCGGTAGCTCGGGGGTCTGAGATGGAGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 72 bp | CGGTGTTGCGCTGTGTCCGGTGCAGGCGCCGTCCTCTaGCTTCTCTGGGGTGTGTGCAGCGTCGACGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RCCAVSGAGAVL*LLWGVCSVDAV Trigger: GACAGCGTCGACGCTGCACACACCCCAGAGAAGCCAGAGGACGGCGCCTGCACCGGACACAGCGCAACACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CAA 72 bp | ACTGTGAAGGGCACACGGAGCCGGGTCCTGGCCCATTaGACCGGCTCGGCTCACCCCTGCGCTGCCTGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: TVKGTRSRVLAH*TGSAHPCAACS Trigger: CGAACAGGCAGCGCAGGGGTGAGCCGAGCCGGTCAAATGGGCCAGGACCCGGCTCCGTGTGCCCTTCACAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CAA 90 bp | GTCATCCTGACTGTGAAGGGCACACGGAGCCGGGTCCTGGCCCATTaGACCGGCTCGGCTCACCCCTGCGCTGCCTGTTCGCCTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VILTVKGTRSRVLAH*TGSAHPCAACSPVS Trigger: GGACACAGGCGAACAGGCAGCGCAGGGGTGAGCCGAGCCGGTCAAATGGGCCAGGACCCGGCTCCGTGTGCCCTTCACAGTCAGGATGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS TCA 72 bp | TCTTCCACCCTCGGGGAGGTGTTCTTCCCCCTCTGCTaGGCCTGCATGAAGACGCGTGCGCTCAGGCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSTLGEVFFPLC*ACMKTRALRPA Trigger: CGCCGGCCTGAGCGCACGCGTCTTCATGCAGGCTCAGCAGAGGGGGAAGAACACCTCCCCGAGGGTGGAAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 72 bp | CTGCCTAGGCTCACTTGTGGTGTGGACGCTGTGCTGTaGCGGTGTTGCGCTGTGTCCGGTGCAGGCGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPRLTCGVDAVL*RCCAVSGAGAV Trigger: GACGGCGCCTGCACCGGACACAGCGCAACACCGGCACAGCACAGCGTCCACACCACAAGTGAGCCTAGGCAG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 72 bp | CCTGGCCCATTTGACCGGCTCGGCTCACCCCTGCGCTaGCTGTTCGCCTGTGTCCGTCTGTCCGTCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGPFDRLGSPLR*LFACVRLSVHL Trigger: CAGATGGACGGACAGACGGACACAGGCGAACAGGCAGCGCAGGGGTGAGCCGAGCCGGTCAAATGGGCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 72 bp | GCGTCTCCTATGGAAAAAGTGGCTCACACCAGAGCCTaGGCCCCGGAGGGAGGAGCCACGCGCCTGGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASPMEKVAHTRA*APEGGATRLGD Trigger: GTCTCCCAGGCGCGTGGCTCCTCCCTCCGGGGCCCAGGCTCTGGTGTGAGCCACTTTTTCCATAGGAGACGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 72 bp | CACAGCTGCCTAGGCTCACTTGTGGTGTGGACGCTGTaGTGTGCCGGTGTTGCGCTGTGTCCGGTGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: HSCLGSLVVWTL*CAGVALCPVQA Trigger: CGCCTGCACCGGACACAGCGCAACACCGGCACAGCACAGCGTCCACACCACAAGTGAGCCTAGGCAGCTGTG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CAA 72 bp | CTGCGGCCGTCCTGGCTGTCCTGGCCTATGTCGGGCTaGAGTGGGGTGGCAGGTTCCGAGATGAGGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRPSWLSWPMSG*SGVAGSEMRRN Trigger: GTTCCTCCTCATCTCGGAACCTGCCACCCCACTCAAGCCCGACATAGGCCAGGACAGCCAGGACGGCCGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 72 bp | GTGCGCTCAGGCCGGCGTCTGCAGTGTAGACACAGCTaGCTAGGCTCACTTGTGGTGTGGACGCTGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VRSGRRLQCRHS*LGSLVVWTLCC Trigger: ACAGCACAGCGTCCACACCACAAGTGAGCCTAGGCAGCTGTGTCTACACTGCAGACGCCGGCCTGAGCGCAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS GCA 72 bp | GTTCTTCCCCCTCTGCTGAGCCTGCATGAAGACGCGTaGGCTCAGGCCGGCGTCTGCAGTGTAGACACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLPPLLSLHEDA*AQAGVCSVDTA Trigger: AGCTGTGTCTACACTGCAGACGCCGGCCTGAGCGCACGCGTCTTCATGCAGGCTCAGCAGAGGGGGAAGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 72 bp | GTGAGCTGCAAGTATGGGCGTCTCCTATGGAAAAAGTaGCTCACACCAGAGCCTGGGCCCCGGAGGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSCKYGRLLWKK*LTPEPGPRREE Trigger: CTCCTCCCTCCGGGGCCCAGGCTCTGGTGTGAGCCACTTTTTCCATAGGAGACGCCCATACTTGCAGCTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS TCA 72 bp | TATCTACAGGACAAGCACCGCGGCTGTACCAGCCTCTaGGTTCCGACTCGGGTCCTGCAGGTGTGGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: YLQDKHRGCTSL*VPTRVLQVWLP Trigger: AGGAAGCCACACCTGCAGGACCCGAGTCGGAACTCAGAGGCTGGTACAGCCGCGGTGCTTGTCCTGTAGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 72 bp | GACAAAGGCGTGAGCTGCAAGTATGGGCGTCTCCTATaGAAAAAGTGGCTCACACCAGAGCCTGGGCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: DKGVSCKYGRLL*KKWLTPEPGPR Trigger: CCGGGGCCCAGGCTCTGGTGTGAGCCACTTTTTCCATAGGAGACGCCCATACTTGCAGCTCACGCCTTTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||
| CDS CCA 72 bp | GGCCAGGGCACCAGACAAAGGCGTGAGCTGCAAGTATaGGCGTCTCCTATGGAAAAAGTGGCTCACACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GQGTRQRRELQV*ASPMEKVAHTR Trigger: TCTGGTGTGAGCCACTTTTTCCATAGGAGACGCCCATACTTGCAGCTCACGCCTTTGTCTGGTGCCCTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538731.2 ENST00000671908.1 |
||