Pregenerated sensors for LINC02360 (Homo sapiens)
Ensembl gene IDs: ENSG00000248300Ensembl transcript IDs: ENST00000506195.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCCTGAAGGTTTCCAGATGGACATCTTCTCCTTGTCTCCTCATATaGACCAATTGGAGTCAGGATGTCACACCAGGTCTTGAGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLKVSRWTSSPCLLI*TNWSQDVTPGLEPP Trigger: GGGAGGCTCAAGACCTGGTGTGACATCCTGACTCCAATTGGTTCATATGAGGAGACAAGGAGAAGATGTCCATCTGGAAACCTTCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CCA 90 bp | TGTGCTGGGCTCTTATTTACCTGCTACAGGCTGATATTCTCCGTATaGTTGAGTATACGTCCAAGCACTGCGAAGCTTCACCTCTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: CAGLLFTCYRLIFSV*LSIRPSTAKLHLYL Trigger: CAGGTAGAGGTGAAGCTTCGCAGTGCTTGGACGTATACTCAACCATACGGAGAATATCAGCCTGTAGCAGGTAAATAAGAGCCCAGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CCA 90 bp | ACAGTTCTGGAGACTGAGAAGTCCAGAACAAAGTACCAGCAGATCTaGTGTCTGGTGAAGATCCACTTCCTGAAGGTTTCCAGATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TVLETEKSRTKYQQI*CLVKIHFLKVSRWT Trigger: TGTCCATCTGGAAACCTTCAGGAAGTGGATCTTCACCAGACACCAGATCTGCTGGTACTTTGTTCTGGACTTCTCAGTCTCCAGAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CCA 90 bp | ATAATGTGGCACTGTCTTCTTGTAGCTCTGCCTTTTCTTCTGTGCTaGGCTCTTATTTACCTGCTACAGGCTGATATTCTCCGTATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IMWHCLLVALPFLLC*ALIYLLQADILRMV Trigger: AACCATACGGAGAATATCAGCCTGTAGCAGGTAAATAAGAGCCCAGCACAGAAGAAAAGGCAGAGCTACAAGAAGACAGTGCCACATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS GCA 90 bp | AAAATAATGTGGCACTGTCTTCTTGTAGCTCTGCCTTTTCTTCTGTaGTGGGCTCTTATTTACCTGCTACAGGCTGATATTCTCCGTATG | + |
|
Preference number: 5 (lower is better) Translates to: KIMWHCLLVALPFLL*WALIYLLQADILRM Trigger: CATACGGAGAATATCAGCCTGTAGCAGGTAAATAAGAGCCCAGCACAGAAGAAAAGGCAGAGCTACAAGAAGACAGTGCCACATTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CAA 72 bp | TTCCTCCTTATCGGCTTGAGGCTGAAGTCAGCAACTTaGCTTCACCTCTTCTGGCTCAGGCATAGATGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: FLLIGLRLKSAT*LHLFWLRHRCV Trigger: TACGCATCTATGCCTGAGCCAGAAGAGGTGAAGCAAAGTTGCTGACTTCAGCCTCAAGCCGATAAGGAGGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CCA 72 bp | GAGACTGAGAAGTCCAGAACAAAGTACCAGCAGATCTaGTGTCTGGTGAAGATCCACTTCCTGAAGGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ETEKSRTKYQQI*CLVKIHFLKVS Trigger: GGAAACCTTCAGGAAGTGGATCTTCACCAGACACCAGATCTGCTGGTACTTTGTTCTGGACTTCTCAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CAA 90 bp | GGTGAAGATCCACTTCCTGAAGGTTTCCAGATGGACATCTTCTCCTaGTCTCCTCATATGAACCAATTGGAGTCAGGATGTCACACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GEDPLPEGFQMDIFS*SPHMNQLESGCHTR Trigger: CCTGGTGTGACATCCTGACTCCAATTGGTTCATATGAGGAGACAAGGAGAAGATGTCCATCTGGAAACCTTCAGGAAGTGGATCTTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS TCA 72 bp | GTTTCCAGATGGACATCTTCTCCTTGTCTCCTCATATaGACCAATTGGAGTCAGGATGTCACACCAGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSRWTSSPCLLI*TNWSQDVTPGL Trigger: AAGACCTGGTGTGACATCCTGACTCCAATTGGTTCATATGAGGAGACAAGGAGAAGATGTCCATCTGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CCA 72 bp | CTCTTATTTACCTGCTACAGGCTGATATTCTCCGTATaGTTGAGTATACGTCCAAGCACTGCGAAGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLFTCYRLIFSV*LSIRPSTAKLH Trigger: GTGAAGCTTCGCAGTGCTTGGACGTATACTCAACCATACGGAGAATATCAGCCTGTAGCAGGTAAATAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CAA 72 bp | TTATTTACCTGCTACAGGCTGATATTCTCCGTATGGTaGAGTATACGTCCAAGCACTGCGAAGCTTCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LFTCYRLIFSVW*SIRPSTAKLHL Trigger: GAGGTGAAGCTTCGCAGTGCTTGGACGTATACTCAACCATACGGAGAATATCAGCCTGTAGCAGGTAAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CAA 72 bp | TCTTTAAACTGCCAAGCTCTTTTCCTCCTTATCGGCTaGAGGCTGAAGTCAGCAACTTTGCTTCACCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLNCQALFLLIG*RLKSATLLHLF Trigger: GAAGAGGTGAAGCAAAGTTGCTGACTTCAGCCTCAAGCCGATAAGGAGGAAAAGAGCTTGGCAGTTTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS CAA 72 bp | CCACTTCCTGAAGGTTTCCAGATGGACATCTTCTCCTaGTCTCCTCATATGAACCAATTGGAGTCAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: PLPEGFQMDIFS*SPHMNQLESGC Trigger: ACATCCTGACTCCAATTGGTTCATATGAGGAGACAAGGAGAAGATGTCCATCTGGAAACCTTCAGGAAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||
| CDS TCA 72 bp | AAACAACAGACACTTATTTCTCACAGTTCTGGAGACTaGGAAGTCCAGAACAAAGTACCAGCAGATCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KQQTLISHSSGD*EVQNKVPADLV Trigger: CACCAGATCTGCTGGTACTTTGTTCTGGACTTCTCAGTCTCCAGAACTGTGAGAAATAAGTGTCTGTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506195.1 |
||