Pregenerated sensors for LINC02357 (Homo sapiens)
Ensembl gene IDs: ENSG00000283314Ensembl transcript IDs: ENST00000637313.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTATTCATGCTCCCAGCAACTGGAGTGACTGGGAATATGGTCCCATaGTGTCCTCTAACCCTTGCTAAGTTCTGGGCTTTGACCAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: VFMLPATGVTGNMVP*CPLTLAKFWALTKP Trigger: AGGCTTGGTCAAAGCCCAGAACTTAGCAAGGGTTAGAGGACATCATGGGACCATATTCCCAGTCACTCCAGTTGCTGGGAGCATGAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS CCA 90 bp | AAGTTCTGGGCTTTGACCAAGCCTCAGCCATACTCTGAGGGCAGCTaGATTCAGGTAAGTTTGCTGGTCTGGTATTTGTTCCTCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: KFWALTKPQPYSEGS*IQVSLLVWYLFLCL Trigger: AAGACAGAGGAACAAATACCAGACCAGCAAACTTACCTGAATCCAGCTGCCCTCAGAGTATGGCTGAGGCTTGGTCAAAGCCCAGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS TCA 90 bp | CACCCCAAATGCTCACCACTGCCCTCTTCATCAAGACAGGATCATTaGTCAGGTGCTTGGACACTGTGGCAAAGTAAAATCACCTTAAAC | + |
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Preference number: 5 (lower is better) Translates to: HPKCSPLPSSSRQDH*SGAWTLWQSKITLN Trigger: GTTTAAGGTGATTTTACTTTGCCACAGTGTCCAAGCACCTGATCAATGATCCTGTCTTGATGAAGAGGGCAGTGGTGAGCATTTGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS CCA 90 bp | CAGCCATACTCTGAGGGCAGCTGGATTCAGGTAAGTTTGCTGGTCTaGTATTTGTTCCTCTGTCTTTATCCTTTATCTAGTAAACAGGCC | + |
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Preference number: 5 (lower is better) Translates to: QPYSEGSWIQVSLLV*YLFLCLYPLSSKQA Trigger: GGCCTGTTTACTAGATAAAGGATAAAGACAGAGGAACAAATACCAGACCAGCAAACTTACCTGAATCCAGCTGCCCTCAGAGTATGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS CCA 90 bp | GATAGGAAGGCCAGGGCTTCTATAATAACAGCACTCAATAGAATCTaGAGAAACTTTCGTCTTCTTCTAGACTCCTTCCAGCTCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: DRKARASIITALNRI*RNFRLLLDSFQLCH Trigger: ATGGCAGAGCTGGAAGGAGTCTAGAAGAAGACGAAAGTTTCTCCAGATTCTATTGAGTGCTGTTATTATAGAAGCCCTGGCCTTCCTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS TCA 90 bp | CTTTGTACTCCTGCCTTTAACATTTCTCAGTTTCCAAGCATTTCTTaGATGTTGGCTTTTCCTTACCATGTGACTAGGGCTATGTTATCT | + |
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Preference number: 5 (lower is better) Translates to: LCTPAFNISQFPSIS*MLAFPYHVTRAMLS Trigger: AGATAACATAGCCCTAGTCACATGGTAAGGAAAAGCCAACATTCAAGAAATGCTTGGAAACTGAGAAATGTTAAAGGCAGGAGTACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS TCA 72 bp | CTCCCAGCAACTGGAGTGACTGGGAATATGGTCCCATaGTGTCCTCTAACCCTTGCTAAGTTCTGGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LPATGVTGNMVP*CPLTLAKFWAL Trigger: CAAAGCCCAGAACTTAGCAAGGGTTAGAGGACATCATGGGACCATATTCCCAGTCACTCCAGTTGCTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS GCA 72 bp | CAATCAGCAAATAATGTGCATGGCCTTCACATCTTCTaGATAGGCCTCCATGCCTTCGCTCACGGCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QSANNVHGLHIF*IGLHAFAHGFL Trigger: GAGGAAGCCGTGAGCGAAGGCATGGAGGCCTATGCAGAAGATGTGAAGGCCATGCACATTATTTGCTGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS CCA 72 bp | GCTTTGACCAAGCCTCAGCCATACTCTGAGGGCAGCTaGATTCAGGTAAGTTTGCTGGTCTGGTATTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: ALTKPQPYSEGS*IQVSLLVWYLF Trigger: GAACAAATACCAGACCAGCAAACTTACCTGAATCCAGCTGCCCTCAGAGTATGGCTGAGGCTTGGTCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS TCA 72 bp | CCAAGGATCGACTTCCTGTTTCACCTCAACCTACAGTaGCCATTCTCTTCACCTCCTTTGTACTCCTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PRIDFLFHLNLQ*PFSSPPLYSCL Trigger: AAGGCAGGAGTACAAAGGAGGTGAAGAGAATGGTCACTGTAGGTTGAGGTGAAACAGGAAGTCGATCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS TCA 72 bp | TGCTCACCACTGCCCTCTTCATCAAGACAGGATCATTaGTCAGGTGCTTGGACACTGTGGCAAAGTAAAATC | + |
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Preference number: 6 (lower is better) Translates to: CSPLPSSSRQDH*SGAWTLWQSKI Trigger: GATTTTACTTTGCCACAGTGTCCAAGCACCTGATCAATGATCCTGTCTTGATGAAGAGGGCAGTGGTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS GCA 72 bp | AGAAACTTTCGTCTTCTTCTAGACTCCTTCCAGCTCTaGCATTTCCTAAATCAGTGTGGCATTGTCCCCATG | + |
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Preference number: 6 (lower is better) Translates to: RNFRLLLDSFQL*HFLNQCGIVPM Trigger: CATGGGGACAATGCCACACTGATTTAGGAAATGGCAGAGCTGGAAGGAGTCTAGAAGAAGACGAAAGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS CCA 72 bp | GCCAGGGCTTCTATAATAACAGCACTCAATAGAATCTaGAGAAACTTTCGTCTTCTTCTAGACTCCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ARASIITALNRI*RNFRLLLDSFQ Trigger: CTGGAAGGAGTCTAGAAGAAGACGAAAGTTTCTCCAGATTCTATTGAGTGCTGTTATTATAGAAGCCCTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS GCA 72 bp | GCATTTTGCTTTAAAGCAAAAGATAATCCCACATCATaGATTGCATTCAGTTGTCACGTGTCTGCAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: AFCFKAKDNPTS*IAFSCHVSAVS Trigger: GGAGACTGCAGACACGTGACAACTGAATGCAATGCATGATGTGGGATTATCTTTTGCTTTAAAGCAAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS CAA 72 bp | GCTAGGTTTTATCATTGGAGGGTTATTAGTTTTGCTTaGTCATTAAGAATCTGGAGGGCGGATACTTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ARFYHWRVISFA*SLRIWRADTLR Trigger: TCTCAAAGTATCCGCCCTCCAGATTCTTAATGACAAAGCAAAACTAATAACCCTCCAATGATAAAACCTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS CCA 72 bp | CAGTTAGTTAAGGTGGTATCTGCTAGGTTTTATCATTaGAGGGTTATTAGTTTTGCTTTGTCATTAAGAATC | + |
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Preference number: 6 (lower is better) Translates to: QLVKVVSARFYH*RVISFALSLRI Trigger: GATTCTTAATGACAAAGCAAAACTAATAACCCTCCAATGATAAAACCTAGCAGATACCACCTTAACTAACTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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| CDS CAA 72 bp | TTATCTAGTAAACAGGCCTTATTCAGATTTCACCAATaGTCCCAATACTGTCCTTTAAAGAACAGCATTTTG | + |
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Preference number: 6 (lower is better) Translates to: LSSKQALFRFHQ*SQYCPLKNSIL Trigger: CAAAATGCTGTTCTTTAAAGGACAGTATTGGGACAATTGGTGAAATCTGAATAAGGCCTGTTTACTAGATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637313.1 |
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