Pregenerated sensors for LINC02356 (Homo sapiens)

Ensembl gene IDs: ENSG00000257595

Ensembl transcript IDs: ENST00000548846.1, ENST00000552663.2

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTGAGAGTGCCGCTGCCACGAACACAGCGAGGTCGTCGTCGCCACTaGGAGGCCGGCCAGCCACGGCTCTTCCCACTCGGCAGGTCACTG	+
Preference number: 5 (lower is better) Translates to: LRVPLPRTQRGRRRH*EAGQPRLFPLGRSL Trigger: CAGTGACCTGCCGAGTGGGAAGAGCCGTGGCTGGCCGGCCTCCCAGTGGCGACGACGACCTCGCTGTGTTCGTGGCAGCGGCACTCTCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548846.1 ENST00000552663.2
CDS CCA 90 bp	ACTGGGAGGCCGGCCAGCCACGGCTCTTCCCACTCGGCAGGTCACTaGGACCACCAGCCCGTGAAAGCAGCCAGGAGGAAGCCTGTACCC	+
Preference number: 5 (lower is better) Translates to: TGRPASHGSSHSAGH*DHQPVKAARRKPVP Trigger: GGGTACAGGCTTCCTCCTGGCTGCTTTCACGGGCTGGTGGTCCCAGTGACCTGCCGAGTGGGAAGAGCCGTGGCTGGCCGGCCTCCCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS TCA 90 bp	GCCACGGCTCTTCCCACTCGGCAGGTCACTGGGACCACCAGCCCGTaGAAGCAGCCAGGAGGAAGCCTGTACCCTGCAAAGCCACAGGAG	+
Preference number: 5 (lower is better) Translates to: ATALPTRQVTGTTSP*KQPGGSLYPAKPQE Trigger: CTCCTGTGGCTTTGCAGGGTACAGGCTTCCTCCTGGCTGCTTTCACGGGCTGGTGGTCCCAGTGACCTGCCGAGTGGGAAGAGCCGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS GCA 90 bp	TGGGACCACCAGCCCGTGAAAGCAGCCAGGAGGAAGCCTGTACCCTaGAAAGCCACAGGAGTGGAGCTGCCCAAGATCATGGGAACCCAT	+
Preference number: 5 (lower is better) Translates to: WDHQPVKAARRKPVP*KATGVELPKIMGTH Trigger: ATGGGTTCCCATGATCTTGGGCAGCTCCACTCCTGTGGCTTTGCAGGGTACAGGCTTCCTCCTGGCTGCTTTCACGGGCTGGTGGTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS GCA 90 bp	AAGCCACAGGAGTGGAGCTGCCCAAGATCATGGGAACCCATCTCTTaGATCAGCGTGACCTTTGGAATCGCAATGAGCTTCCCGGGCTCC	+
Preference number: 5 (lower is better) Translates to: KPQEWSCPRSWEPIS*ISVTFGIAMSFPGS Trigger: GGAGCCCGGGAAGCTCATTGCGATTCCAAAGGTCACGCTGATGCAAGAGATGGGTTCCCATGATCTTGGGCAGCTCCACTCCTGTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS CCA 90 bp	CTGCCCAAGATCATGGGAACCCATCTCTTGCATCAGCGTGACCTTTaGAATCGCAATGAGCTTCCCGGGCTCCAATCCGCTTTTCTGGGC	+
Preference number: 5 (lower is better) Translates to: LPKIMGTHLLHQRDL*NRNELPGLQSAFLG Trigger: GCCCAGAAAAGCGGATTGGAGCCCGGGAAGCTCATTGCGATTCCAAAGGTCACGCTGATGCAAGAGATGGGTTCCCATGATCTTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS CCA 90 bp	AGCCTGTACCCTGCAAAGCCACAGGAGTGGAGCTGCCCAAGATCATaGGAACCCATCTCTTGCATCAGCGTGACCTTTGGAATCGCAATG	+
Preference number: 5 (lower is better) Translates to: SLYPAKPQEWSCPRS*EPISCISVTFGIAM Trigger: CATTGCGATTCCAAAGGTCACGCTGATGCAAGAGATGGGTTCCCATGATCTTGGGCAGCTCCACTCCTGTGGCTTTGCAGGGTACAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS GCA 90 bp	CTTGGAAAGGCAAAGGGATTCCAACAAATAACCTTCCCATCACCGTaGCCAGATTTGAGAGTGCCGCTGCCACGAACACAGCGAGGTCGT	+
Preference number: 5 (lower is better) Translates to: LGKAKGFQQITFPSP*PDLRVPLPRTQRGR Trigger: ACGACCTCGCTGTGTTCGTGGCAGCGGCACTCTCAAATCTGGGCACGGTGATGGGAAGGTTATTTGTTGGAATCCCTTTGCCTTTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548846.1 ENST00000552663.2
CDS CCA 72 bp	CCGCTGCCACGAACACAGCGAGGTCGTCGTCGCCACTaGGAGGCCGGCCAGCCACGGCTCTTCCCACTCGGC	+
Preference number: 6 (lower is better) Translates to: PLPRTQRGRRRH*EAGQPRLFPLG Trigger: GCCGAGTGGGAAGAGCCGTGGCTGGCCGGCCTCCCAGTGGCGACGACGACCTCGCTGTGTTCGTGGCAGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548846.1 ENST00000552663.2
CDS CCA 72 bp	CCGGCCAGCCACGGCTCTTCCCACTCGGCAGGTCACTaGGACCACCAGCCCGTGAAAGCAGCCAGGAGGAAG	+
Preference number: 6 (lower is better) Translates to: PASHGSSHSAGH*DHQPVKAARRK Trigger: CTTCCTCCTGGCTGCTTTCACGGGCTGGTGGTCCCAGTGACCTGCCGAGTGGGAAGAGCCGTGGCTGGCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS TCA 72 bp	CTTCCCACTCGGCAGGTCACTGGGACCACCAGCCCGTaGAAGCAGCCAGGAGGAAGCCTGTACCCTGCAAAG	+
Preference number: 6 (lower is better) Translates to: LPTRQVTGTTSP*KQPGGSLYPAK Trigger: CTTTGCAGGGTACAGGCTTCCTCCTGGCTGCTTTCACGGGCTGGTGGTCCCAGTGACCTGCCGAGTGGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS CCA 72 bp	CCAGGAGGAAGCCTGTACCCTGCAAAGCCACAGGAGTaGAGCTGCCCAAGATCATGGGAACCCATCTCTTGC	+
Preference number: 6 (lower is better) Translates to: PGGSLYPAKPQE*SCPRSWEPISC Trigger: GCAAGAGATGGGTTCCCATGATCTTGGGCAGCTCCACTCCTGTGGCTTTGCAGGGTACAGGCTTCCTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS CAA 90 bp	GCAAAGGGATTCCAACAAATAACCTTCCCATCACCGTGCCCAGATTaGAGAGTGCCGCTGCCACGAACACAGCGAGGTCGTCGTCGCCAC	+
Preference number: 6 (lower is better) Translates to: AKGFQQITFPSPCPD*RVPLPRTQRGRRRH Trigger: GTGGCGACGACGACCTCGCTGTGTTCGTGGCAGCGGCACTCTCAAATCTGGGCACGGTGATGGGAAGGTTATTTGTTGGAATCCCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548846.1 ENST00000552663.2
CDS GCA 72 bp	GGAAGCCTGTACCCTGCAAAGCCACAGGAGTGGAGCTaGCCAAGATCATGGGAACCCATCTCTTGCATCAGC	+
Preference number: 6 (lower is better) Translates to: GSLYPAKPQEWS*PRSWEPISCIS Trigger: GCTGATGCAAGAGATGGGTTCCCATGATCTTGGGCAGCTCCACTCCTGTGGCTTTGCAGGGTACAGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS CAA 90 bp	AAAGCCACAGGAGTGGAGCTGCCCAAGATCATGGGAACCCATCTCTaGCATCAGCGTGACCTTTGGAATCGCAATGAGCTTCCCGGGCTC	+
Preference number: 6 (lower is better) Translates to: KATGVELPKIMGTHL*HQRDLWNRNELPGL Trigger: GAGCCCGGGAAGCTCATTGCGATTCCAAAGGTCACGCTGATGCAAGAGATGGGTTCCCATGATCTTGGGCAGCTCCACTCCTGTGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS CCA 72 bp	CCTGCAAAGCCACAGGAGTGGAGCTGCCCAAGATCATaGGAACCCATCTCTTGCATCAGCGTGACCTTTGGA	+
Preference number: 6 (lower is better) Translates to: PAKPQEWSCPRS*EPISCISVTFG Trigger: TCCAAAGGTCACGCTGATGCAAGAGATGGGTTCCCATGATCTTGGGCAGCTCCACTCCTGTGGCTTTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS CCA 72 bp	ATCATGGGAACCCATCTCTTGCATCAGCGTGACCTTTaGAATCGCAATGAGCTTCCCGGGCTCCAATCCGCT	+
Preference number: 6 (lower is better) Translates to: IMGTHLLHQRDL*NRNELPGLQSA Trigger: AGCGGATTGGAGCCCGGGAAGCTCATTGCGATTCCAAAGGTCACGCTGATGCAAGAGATGGGTTCCCATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS CAA 72 bp	TTCCAACAAATAACCTTCCCATCACCGTGCCCAGATTaGAGAGTGCCGCTGCCACGAACACAGCGAGGTCGT	+
Preference number: 6 (lower is better) Translates to: FQQITFPSPCPD*RVPLPRTQRGR Trigger: ACGACCTCGCTGTGTTCGTGGCAGCGGCACTCTCAAATCTGGGCACGGTGATGGGAAGGTTATTTGTTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548846.1 ENST00000552663.2
CDS GCA 72 bp	GCAAAGGGATTCCAACAAATAACCTTCCCATCACCGTaGCCAGATTTGAGAGTGCCGCTGCCACGAACACAG	+
Preference number: 6 (lower is better) Translates to: AKGFQQITFPSP*PDLRVPLPRTQ Trigger: CTGTGTTCGTGGCAGCGGCACTCTCAAATCTGGGCACGGTGATGGGAAGGTTATTTGTTGGAATCCCTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548846.1 ENST00000552663.2
CDS GCA 72 bp	GAGTGGAGCTGCCCAAGATCATGGGAACCCATCTCTTaGATCAGCGTGACCTTTGGAATCGCAATGAGCTTC	+
Preference number: 6 (lower is better) Translates to: EWSCPRSWEPIS*ISVTFGIAMSF Trigger: GAAGCTCATTGCGATTCCAAAGGTCACGCTGATGCAAGAGATGGGTTCCCATGATCTTGGGCAGCTCCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2
CDS CAA 72 bp	GGAGTGGAGCTGCCCAAGATCATGGGAACCCATCTCTaGCATCAGCGTGACCTTTGGAATCGCAATGAGCTT	+
Preference number: 6 (lower is better) Translates to: GVELPKIMGTHL*HQRDLWNRNEL Trigger: AAGCTCATTGCGATTCCAAAGGTCACGCTGATGCAAGAGATGGGTTCCCATGATCTTGGGCAGCTCCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552663.2

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