Pregenerated sensors for LINC02355 (Homo sapiens)
Ensembl gene IDs: ENSG00000248210Ensembl transcript IDs: ENST00000503100.1, ENST00000656499.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CATCTTTCCCCCGAGTACACCTCACCCTGTCCCTTTAAGGGCTGCTaGCATGGGCCTTTCTACTACAGAAAGCTCAAGGCCAGACTCCAT | + |
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Preference number: 5 (lower is better) Translates to: HLSPEYTSPCPFKGC*HGPFYYRKLKARLH Trigger: ATGGAGTCTGGCCTTGAGCTTTCTGTAGTAGAAAGGCCCATGTCAGCAGCCCTTAAAGGGACAGGGTGAGGTGTACTCGGGGGAAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 90 bp | TCATGGCACAGTCACATGGCTGGTGATTTGATGATGGTTGTCAGCTaGAGCTCAGTGAAAGCTCTAGGGCCAGGGGCCTCAGTTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: SWHSHMAGDLMMVVS*SSVKALGPGASVSL Trigger: GAGAGAAACTGAGGCCCCTGGCCCTAGAGCTTTCACTGAGCTCCAGCTGACAACCATCATCAAATCACCAGCCATGTGACTGTGCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 90 bp | CACCATTCCAAGGTGTGTGAGCACTCTTGGTGCAGAGTAGCAATCTaGGCAGGGCTCAAAGGGGAAGGCTCTTCTCTTTTACATGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: HHSKVCEHSWCRVAI*AGLKGEGSSLLHVA Trigger: TGCCACATGTAAAAGAGAAGAGCCTTCCCCTTTGAGCCCTGCCCAGATTGCTACTCTGCACCAAGAGTGCTCACACACCTTGGAATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656499.1 |
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| CDS CCA 90 bp | CAATCTGGGCAGGGCTCAAAGGGGAAGGCTCTTCTCTTTTACATGTaGCATCAGATCATTTGGACACTGGGTGATTCCCTCCCATCATGG | + |
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Preference number: 5 (lower is better) Translates to: QSGQGSKGKALLFYM*HQIIWTLGDSLPSW Trigger: CCATGATGGGAGGGAATCACCCAGTGTCCAAATGATCTGATGCCACATGTAAAAGAGAAGAGCCTTCCCCTTTGAGCCCTGCCCAGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 90 bp | TCAAAGGGGAAGGCTCTTCTCTTTTACATGTGGCATCAGATCATTTaGACACTGGGTGATTCCCTCCCATCATGGCACAGTCACATGGCT | + |
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Preference number: 5 (lower is better) Translates to: SKGKALLFYMWHQII*TLGDSLPSWHSHMA Trigger: AGCCATGTGACTGTGCCATGATGGGAGGGAATCACCCAGTGTCCAAATGATCTGATGCCACATGTAAAAGAGAAGAGCCTTCCCCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS GCA 90 bp | TCCTCTGTCTTCTCAGTAAATGTACACACAGTACTCAGGTCCAGGTaGAAATGTGGTTCCTCAGTCACAGCTCCTCTGAAACTGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: SSVFSVNVHTVLRSR*KCGSSVTAPLKLKT Trigger: GGTCTTCAGTTTCAGAGGAGCTGTGACTGAGGAACCACATTTGCACCTGGACCTGAGTACTGTGTGTACATTTACTGAGAAGACAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CCA 90 bp | AACTGTGAAGTAAAGGGAGTTGTATTCAGTCTCAGCATGTTGCTTTaGGTGCTCCCAGGTCACAGGCCATCTGTAACATGGCATCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: NCEVKGVVFSLSMLL*VLPGHRPSVTWHQK Trigger: CTTCTGATGCCATGTTACAGATGGCCTGTGACCTGGGAGCACCCAAAGCAACATGCTGAGACTGAATACAACTCCCTTTACTTCACAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CCA 90 bp | CTTCTCAGTAAATGTACACACAGTACTCAGGTCCAGGTGCAAATGTaGTTCCTCAGTCACAGCTCCTCTGAAACTGAAGACCTAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: LLSKCTHSTQVQVQM*FLSHSSSETEDLEM Trigger: CATCTCTAGGTCTTCAGTTTCAGAGGAGCTGTGACTGAGGAACCACATTTGCACCTGGACCTGAGTACTGTGTGTACATTTACTGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS TCA 90 bp | ACAACCCAGTTTGGGCTTCCTCACAGAATGGCTCCTGTATTCCATTaGACGAGAATAAAAGCTGCCATTTTCTTAAGACCCTGTTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: TTQFGLPHRMAPVFH*TRIKAAIFLRPCSD Trigger: ATCAGAACAGGGTCTTAAGAAAATGGCAGCTTTTATTCTCGTTCAATGGAATACAGGAGCCATTCTGTGAGGAAGCCCAAACTGGGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS GCA 90 bp | AATGCAGAAGCAGCCACATGGCTGACAAGATGTTATGTCAAACATTaGAGATGTCCCCTTTCCTTGCAAATATCTCTGGAAATGAGAACT | + |
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Preference number: 5 (lower is better) Translates to: NAEAATWLTRCYVKH*RCPLSLQISLEMRT Trigger: AGTTCTCATTTCCAGAGATATTTGCAAGGAAAGGGGACATCTGCAATGTTTGACATAACATCTTGTCAGCCATGTGGCTGCTTCTGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS GCA 90 bp | TATCAGAGTTTTCTTATGGTGACACAATATTGCAGATACAGGTGGTaGCTCGTGTTCCTCTTGCAGTTTTATTTCTCTCCTTTATGCAGT | + |
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Preference number: 5 (lower is better) Translates to: YQSFLMVTQYCRYRW*LVFLLQFYFSPLCS Trigger: ACTGCATAAAGGAGAGAAATAAAACTGCAAGAGGAACACGAGGCACCACCTGTATCTGCAATATTGTGTCACCATAAGAAAACTCTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CCA 90 bp | TTATATCAGAGTTTTCTTATGGTGACACAATATTGCAGATACAGGTaGTGCCTCGTGTTCCTCTTGCAGTTTTATTTCTCTCCTTTATGC | + |
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Preference number: 5 (lower is better) Translates to: LYQSFLMVTQYCRYR*CLVFLLQFYFSPLC Trigger: GCATAAAGGAGAGAAATAAAACTGCAAGAGGAACACGAGGCACCACCTGTATCTGCAATATTGTGTCACCATAAGAAAACTCTGATATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS TCA 72 bp | CCCGAGTACACCTCACCCTGTCCCTTTAAGGGCTGCTaGCATGGGCCTTTCTACTACAGAAAGCTCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PEYTSPCPFKGC*HGPFYYRKLKA Trigger: GGCCTTGAGCTTTCTGTAGTAGAAAGGCCCATGTCAGCAGCCCTTAAAGGGACAGGGTGAGGTGTACTCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS GCA 72 bp | AAGCTCCACCATTCCAAGGTGTGTGAGCACTCTTGGTaGAGAGTAGCAATCTGGGCAGGGCTCAAAGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: KLHHSKVCEHSW*RVAIWAGLKGE Trigger: TTCCCCTTTGAGCCCTGCCCAGATTGCTACTCTGCACCAAGAGTGCTCACACACCTTGGAATGGTGGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656499.1 |
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| CDS CCA 72 bp | AGTCACATGGCTGGTGATTTGATGATGGTTGTCAGCTaGAGCTCAGTGAAAGCTCTAGGGCCAGGGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SHMAGDLMMVVS*SSVKALGPGAS Trigger: TGAGGCCCCTGGCCCTAGAGCTTTCACTGAGCTCCAGCTGACAACCATCATCAAATCACCAGCCATGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CAA 90 bp | CTGGGTGATTCCCTCCCATCATGGCACAGTCACATGGCTGGTGATTaGATGATGGTTGTCAGCTGGAGCTCAGTGAAAGCTCTAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LGDSLPSWHSHMAGD*MMVVSWSSVKALGP Trigger: TGGCCCTAGAGCTTTCACTGAGCTCCAGCTGACAACCATCATCAAATCACCAGCCATGTGACTGTGCCATGATGGGAGGGAATCACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS TCA 72 bp | GCAGCTCCATGGCTCATCTTCTTCTGCTACCCTCCATaGATTTTCTGTGTAGCCGTGGAAACCACTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: AAPWLIFFCYPP*IFCVAVETTGV Trigger: GACCCCAGTGGTTTCCACGGCTACACAGAAAATTCATGGAGGGTAGCAGAAGAAGATGAGCCATGGAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 72 bp | AAGGTGTGTGAGCACTCTTGGTGCAGAGTAGCAATCTaGGCAGGGCTCAAAGGGGAAGGCTCTTCTCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: KVCEHSWCRVAI*AGLKGEGSSLL Trigger: TAAAAGAGAAGAGCCTTCCCCTTTGAGCCCTGCCCAGATTGCTACTCTGCACCAAGAGTGCTCACACACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656499.1 |
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| CDS TCA 72 bp | CTTTTACATGTGGCATCAGATCATTTGGACACTGGGTaGTTCCCTCCCATCATGGCACAGTCACATGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLHVASDHLDTG*FPPIMAQSHGW Trigger: CCAGCCATGTGACTGTGCCATGATGGGAGGGAATCACCCAGTGTCCAAATGATCTGATGCCACATGTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 72 bp | CAGGGCTCAAAGGGGAAGGCTCTTCTCTTTTACATGTaGCATCAGATCATTTGGACACTGGGTGATTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: QGSKGKALLFYM*HQIIWTLGDSL Trigger: GAGGGAATCACCCAGTGTCCAAATGATCTGATGCCACATGTAAAAGAGAAGAGCCTTCCCCTTTGAGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 72 bp | GTAAAGGGAGTTGTATTCAGTCTCAGCATGTTGCTTTaGGTGCTCCCAGGTCACAGGCCATCTGTAACATGG | + |
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Preference number: 6 (lower is better) Translates to: VKGVVFSLSMLL*VLPGHRPSVTW Trigger: CCATGTTACAGATGGCCTGTGACCTGGGAGCACCCAAAGCAACATGCTGAGACTGAATACAACTCCCTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CCA 72 bp | TACACTGTGGTGTATCACGGAAAATTGGGAGGAGTATaGTTACTACCATCTTTCCCCCGAGTACACCTCACC | + |
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Preference number: 6 (lower is better) Translates to: YTVVYHGKLGGV*LLPSFPRVHLT Trigger: GGTGAGGTGTACTCGGGGGAAAGATGGTAGTAACCATACTCCTCCCAATTTTCCGTGATACACCACAGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 72 bp | CCCTCCATGAATTTTCTGTGTAGCCGTGGAAACCACTaGGGTCCTCTTTTACACTGTGGTGTATCACGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PSMNFLCSRGNH*GPLLHCGVSRK Trigger: TTTCCGTGATACACCACAGTGTAAAAGAGGACCCCAGTGGTTTCCACGGCTACACAGAAAATTCATGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 72 bp | CAGATCATTTGGACACTGGGTGATTCCCTCCCATCATaGCACAGTCACATGGCTGGTGATTTGATGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: QIIWTLGDSLPS*HSHMAGDLMMV Trigger: AACCATCATCAAATCACCAGCCATGTGACTGTGCCATGATGGGAGGGAATCACCCAGTGTCCAAATGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 72 bp | GGGAGTAAAGAACAAACTTGGTGCAGAGTAGCAATCTaGGCAGGGCTCAAAGGGGAAGGCTCTTCTCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: GSKEQTWCRVAI*AGLKGEGSSLL Trigger: TAAAAGAGAAGAGCCTTCCCCTTTGAGCCCTGCCCAGATTGCTACTCTGCACCAAGTTTGTTCTTTACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CAA 72 bp | AGTAAAGGGAGTTGTATTCAGTCTCAGCATGTTGCTTaGGGTGCTCCCAGGTCACAGGCCATCTGTAACATG | + |
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Preference number: 6 (lower is better) Translates to: SKGSCIQSQHVA*GAPRSQAICNM Trigger: CATGTTACAGATGGCCTGTGACCTGGGAGCACCCAAAGCAACATGCTGAGACTGAATACAACTCCCTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CAA 90 bp | AATGAGAACTGTGAAGTAAAGGGAGTTGTATTCAGTCTCAGCATGTaGCTTTGGGTGCTCCCAGGTCACAGGCCATCTGTAACATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: NENCEVKGVVFSLSM*LWVLPGHRPSVTWH Trigger: ATGCCATGTTACAGATGGCCTGTGACCTGGGAGCACCCAAAGCAACATGCTGAGACTGAATACAACTCCCTTTACTTCACAGTTCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CCA 72 bp | AAGGCTCTTCTCTTTTACATGTGGCATCAGATCATTTaGACACTGGGTGATTCCCTCCCATCATGGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: KALLFYMWHQII*TLGDSLPSWHS Trigger: ACTGTGCCATGATGGGAGGGAATCACCCAGTGTCCAAATGATCTGATGCCACATGTAAAAGAGAAGAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CCA 72 bp | GATTCTTCTCCAGATAAACCTCTCCACAACCCAGTTTaGGCTTCCTCACAGAATGGCTCCTGTATTCCATTG | + |
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Preference number: 6 (lower is better) Translates to: DSSPDKPLHNPV*ASSQNGSCIPL Trigger: CAATGGAATACAGGAGCCATTCTGTGAGGAAGCCCAAACTGGGTTGTGGAGAGGTTTATCTGGAGAAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CCA 72 bp | AAATGTACACACAGTACTCAGGTCCAGGTGCAAATGTaGTTCCTCAGTCACAGCTCCTCTGAAACTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: KCTHSTQVQVQM*FLSHSSSETED Trigger: GTCTTCAGTTTCAGAGGAGCTGTGACTGAGGAACCACATTTGCACCTGGACCTGAGTACTGTGTGTACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS TCA 72 bp | TCTGAAGCACCATTTATACCTTCACTTCACAGTAGATaGGTCTTAAAGGCTGGGAGTAGGAAGTCCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SEAPFIPSLHSR*VLKAGSRKSQS Trigger: GCTCTGGGACTTCCTACTCCCAGCCTTTAAGACTCATCTACTGTGAAGTGAAGGTATAAATGGTGCTTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656499.1 |
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| CDS GCA 72 bp | TTCTCAGTAAATGTACACACAGTACTCAGGTCCAGGTaGAAATGTGGTTCCTCAGTCACAGCTCCTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: FSVNVHTVLRSR*KCGSSVTAPLK Trigger: TTTCAGAGGAGCTGTGACTGAGGAACCACATTTGCACCTGGACCTGAGTACTGTGTGTACATTTACTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS TCA 72 bp | TGCCCACATAACATTCCACTATTAAGCCCTTCTTCCTaGAGACAGGGACATCCAGAAAGTATCTTGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: CPHNIPLLSPSS*RQGHPESILDE Trigger: TTCATCCAAGATACTTTCTGGATGTCCCTGTCTTCAGGAAGAAGGGCTTAATAGTGGAATGTTATGTGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS TCA 72 bp | TTTGGGCTTCCTCACAGAATGGCTCCTGTATTCCATTaGACGAGAATAAAAGCTGCCATTTTCTTAAGACCC | + |
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Preference number: 6 (lower is better) Translates to: FGLPHRMAPVFH*TRIKAAIFLRP Trigger: GGGTCTTAAGAAAATGGCAGCTTTTATTCTCGTTCAATGGAATACAGGAGCCATTCTGTGAGGAAGCCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CAA 72 bp | CAATATTGCAGATACAGGTGGTGCCTCGTGTTCCTCTaGCAGTTTTATTTCTCTCCTTTATGCAGTGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: QYCRYRWCLVFL*QFYFSPLCSGN Trigger: GTTACCACTGCATAAAGGAGAGAAATAAAACTGCAAGAGGAACACGAGGCACCACCTGTATCTGCAATATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CAA 72 bp | GTTTGGGCTTCCTCACAGAATGGCTCCTGTATTCCATaGAACGAGAATAAAAGCTGCCATTTTCTTAAGACC | + |
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Preference number: 6 (lower is better) Translates to: VWASSQNGSCIP*NENKSCHFLKT Trigger: GGTCTTAAGAAAATGGCAGCTTTTATTCTCGTTCAATGGAATACAGGAGCCATTCTGTGAGGAAGCCCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS TCA 72 bp | TTCTTGGCCTTCTCACATCAAGGTATCAGGGCTTACTaGGAAAAAGTCCTTTTCCCTAAATTGAACCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: FLAFSHQGIRAY*EKVLFPKLNLK Trigger: TTTAAGGTTCAATTTAGGGAAAAGGACTTTTTCTCAGTAAGCCCTGATACCTTGATGTGAGAAGGCCAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000503100.1 ENST00000656499.1 |
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| CDS CAA 90 bp | TCTTGCAGTTTTATTTCTCTCCTTTATGCAGTGGTAACCACTAAATaGAGTTTAGTGTTCTTCACTTCCATCACTCCTCATTCATTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SCSFISLLYAVVTTK*SLVFFTSITPHSLD Trigger: ATCCAATGAATGAGGAGTGATGGAAGTGAAGAACACTAAACTCAATTTAGTGGTTACCACTGCATAAAGGAGAGAAATAAAACTGCAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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| CDS CAA 90 bp | TTACCTTTTCCCCAAATGATAAATTATCCCATTCTTAGAAGTCTATaGTGGGCCCAGATGATAACTCATAATCTCACTGTTATTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: LPFPQMINYPILRSL*WAQMITHNLTVIST Trigger: AGTGGAAATAACAGTGAGATTATGAGTTATCATCTGGGCCCACAATAGACTTCTAAGAATGGGATAATTTATCATTTGGGGAAAAGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656499.1 |
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| CDS CAA 72 bp | TTTATTTCTCTCCTTTATGCAGTGGTAACCACTAAATaGAGTTTAGTGTTCTTCACTTCCATCACTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FISLLYAVVTTK*SLVFFTSITPH Trigger: ATGAGGAGTGATGGAAGTGAAGAACACTAAACTCAATTTAGTGGTTACCACTGCATAAAGGAGAGAAATAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503100.1 |
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