Pregenerated sensors for LINC02345 (Homo sapiens)
Ensembl gene IDs: ENSG00000259225Ensembl transcript IDs: ENST00000557883.2, ENST00000558081.3, ENST00000558897.1, ENST00000559992.5, ENST00000658097.1, ENST00000669882.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTTCCCATACTAGGCTTGGTGCACAGCCTGTGTGTTGCAGTGTCTaGAGGGGGTTGCATTCAATAACTCAGGGCCCCTGGCCGGTCATG | + |
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Preference number: 5 (lower is better) Translates to: PSHTRLGAQPVCCSV*RGLHSITQGPWPVM Trigger: CATGACCGGCCAGGGGCCCTGAGTTATTGAATGCAACCCCCTTCAGACACTGCAACACACAGGCTGTGCACCAAGCCTAGTATGGGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000557883.2 ENST00000559992.5 ENST00000658097.1 ENST00000669882.1 |
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| CDS TCA 90 bp | GGGACTGTGATTCCTAGAGAATGCCTCCAAGACTTGCAGCCTGGGTaGCCGCTTCAGTGTCTGTGGAGCCCTCATGGTCAAGACGCCATT | + |
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Preference number: 5 (lower is better) Translates to: GTVIPRECLQDLQPG*PLQCLWSPHGQDAI Trigger: AATGGCGTCTTGACCATGAGGGCTCCACAGACACTGAAGCGGTCACCCAGGCTGCAAGTCTTGGAGGCATTCTCTAGGAATCACAGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS TCA 90 bp | CTGGGTCATATGGCGACTCCGTTTGCCTGCAGAAGAATGGGACTGTaGTTCCTAGAGAATGCCTCCAAGACTTGCAGCCTGGGTGACCGC | + |
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Preference number: 5 (lower is better) Translates to: LGHMATPFACRRMGL*FLENASKTCSLGDR Trigger: GCGGTCACCCAGGCTGCAAGTCTTGGAGGCATTCTCTAGGAATCACAGTCCCATTCTTCTGCAGGCAAACGGAGTCGCCATATGACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CCA 90 bp | GCTATGCTGGAGAAATCCATGTGGCAAGGAACTGCAGGTGGCCCCTaGAACCTGAGGACAGTCAGTGAAGAGCTGAGGCTCCAGTTATGT | + |
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Preference number: 5 (lower is better) Translates to: AMLEKSMWQGTAGGP*NLRTVSEELRLQLC Trigger: ACATAACTGGAGCCTCAGCTCTTCACTGACTGTCCTCAGGTTCCAGGGGCCACCTGCAGTTCCTTGCCACATGGATTTCTCCAGCATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CCA 90 bp | AGACTTGCAGCCTGGGTGACCGCTTCAGTGTCTGTGGAGCCCTCATaGTCAAGACGCCATTGTGGAAGTTGTAGCAGGATGGACCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: RLAAWVTASVSVEPS*SRRHCGSCSRMDLK Trigger: CTTAAGGTCCATCCTGCTACAACTTCCACAATGGCGTCTTGACCATGAGGGCTCCACAGACACTGAAGCGGTCACCCAGGCTGCAAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS TCA 90 bp | GGCTGGGAAGTCCAAGATCAAGGTGCCAGTAGGTTCAGTGTCTGGTaGAGGTCAACTTCCTGTTTCATAGCTGGCTTTACCTGGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GWEVQDQGASRFSVW*RSTSCFIAGFTWQA Trigger: GGCCTGCCAGGTAAAGCCAGCTATGAAACAGGAAGTTGACCTTCACCAGACACTGAACCTACTGGCACCTTGATCTTGGACTTCCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000557883.2 ENST00000559992.5 ENST00000658097.1 ENST00000669882.1 |
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| CDS CCA 90 bp | GGTGCTTTTCAGGCACCTCTGATGAGATCTCCTCTTATCTCCCCTTaGGTGGTACCAAGTGCTTCTGAGTTGCAGATAACTTCAGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: GAFQAPLMRSPLISP*VVPSASELQITSAG Trigger: GCCGGCTGAAGTTATCTGCAACTCAGAAGCACTTGGTACCACCCAAGGGGAGATAAGAGGAGATCTCATCAGAGGTGCCTGAAAAGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557883.2 ENST00000669882.1 |
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| CDS TCA 90 bp | GATGAGATCTCCTCTTATCTCCCCTTGGGTGGTACCAAGTGCTTCTaGGTTGCAGATAACTTCAGCCGGCTTGCTTCTTTTCAGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: DEISSYLPLGGTKCF*VADNFSRLASFQDW Trigger: CCAGTCCTGAAAAGAAGCAAGCCGGCTGAAGTTATCTGCAACTCAGAAGCACTTGGTACCACCCAAGGGGAGATAAGAGGAGATCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557883.2 ENST00000669882.1 |
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| CDS TCA 90 bp | GATCATATCATCTCTTATCTCCCCTTGGGTGGTACCAAGTGCTTCTaGGTTGCAGATAACTTCAGCCGGCTTGCTTCTTTTCAGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: DHIISYLPLGGTKCF*VADNFSRLASFQDW Trigger: CCAGTCCTGAAAAGAAGCAAGCCGGCTGAAGTTATCTGCAACTCAGAAGCACTTGGTACCACCCAAGGGGAGATAAGAGATGATATGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658097.1 |
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| CDS GCA 90 bp | AATGTACCTAAGAGTAAACTTACTGGGTCATATGGCGACTCCGTTTaGCTGCAGAAGAATGGGACTGTGATTCCTAGAGAATGCCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: NVPKSKLTGSYGDSV*LQKNGTVIPRECLQ Trigger: TTGGAGGCATTCTCTAGGAATCACAGTCCCATTCTTCTGCAGGCAAACGGAGTCGCCATATGACCCAGTAAGTTTACTCTTAGGTACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CCA 72 bp | GCCTGGGTGACCGCTTCAGTGTCTGTGGAGCCCTCATaGTCAAGACGCCATTGTGGAAGTTGTAGCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: AWVTASVSVEPS*SRRHCGSCSRM Trigger: CATCCTGCTACAACTTCCACAATGGCGTCTTGACCATGAGGGCTCCACAGACACTGAAGCGGTCACCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS TCA 72 bp | ACTAGGCTTGGTGCACAGCCTGTGTGTTGCAGTGTCTaGAGGGGGTTGCATTCAATAACTCAGGGCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TRLGAQPVCCSV*RGLHSITQGPW Trigger: CCAGGGGCCCTGAGTTATTGAATGCAACCCCCTTCAGACACTGCAACACACAGGCTGTGCACCAAGCCTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000557883.2 ENST00000559992.5 ENST00000658097.1 ENST00000669882.1 |
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| CDS TCA 72 bp | ATTCCTAGAGAATGCCTCCAAGACTTGCAGCCTGGGTaGCCGCTTCAGTGTCTGTGGAGCCCTCATGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: IPRECLQDLQPG*PLQCLWSPHGQ Trigger: TTGACCATGAGGGCTCCACAGACACTGAAGCGGTCACCCAGGCTGCAAGTCTTGGAGGCATTCTCTAGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS TCA 72 bp | ATGGCGACTCCGTTTGCCTGCAGAAGAATGGGACTGTaGTTCCTAGAGAATGCCTCCAAGACTTGCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: MATPFACRRMGL*FLENASKTCSL Trigger: CAGGCTGCAAGTCTTGGAGGCATTCTCTAGGAATCACAGTCCCATTCTTCTGCAGGCAAACGGAGTCGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CCA 72 bp | GTTGAGAACATCCAGAAAGCCAAGCAAGACCAGGGCTaGGTCATATGGCGACTCCGTTTGCCTGCAGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: VENIQKAKQDQG*VIWRLRLPAEE Trigger: TTCTTCTGCAGGCAAACGGAGTCGCCATATGACCCAGCCCTGGTCTTGCTTGGCTTTCTGGATGTTCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558897.1 |
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| CDS CAA 90 bp | GACCTTAAGTATCCCCATTGTCCCAGCCTCCTGATGTTTACTTCTTaGTCATATCTCCTCCCTCTGACCTGGGTGGGGACTGTAACTTGC | + |
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Preference number: 6 (lower is better) Translates to: DLKYPHCPSLLMFTS*SYLLPLTWVGTVTC Trigger: GCAAGTTACAGTCCCCACCCAGGTCAGAGGGAGGAGATATGACAAAGAAGTAAACATCAGGAGGCTGGGACAATGGGGATACTTAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CAA 90 bp | AGATCTCCTCTTATCTCCCCTTGGGTGGTACCAAGTGCTTCTGAGTaGCAGATAACTTCAGCCGGCTTGCTTCTTTTCAGGACTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSPLISPWVVPSASE*QITSAGLLLFRTGF Trigger: GAAGCCAGTCCTGAAAAGAAGCAAGCCGGCTGAAGTTATCTGCAACTCAGAAGCACTTGGTACCACCCAAGGGGAGATAAGAGGAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557883.2 ENST00000669882.1 |
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| CDS TCA 72 bp | CTCCTCCTTGTGGCTGAATACGGGCTGATGACGATCTaGAGGGAGTTTTTAGGCACATGTGAAGCTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLLVAEYGLMTI*REFLGTCEAFL Trigger: GAGGAAAGCTTCACATGTGCCTAAAAACTCCCTTCAGATCGTCATCAGCCCGTATTCAGCCACAAGGAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559992.5 |
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| CDS TCA 72 bp | TCCTGTTTCATAGCTGGCTTTACCTGGCAGGCCTCATaGAGAAAAGCTGTCCTTCCCATACTAGGCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SCFIAGFTWQAS*RKAVLPILGLV Trigger: CACCAAGCCTAGTATGGGAAGGACAGCTTTTCTTCATGAGGCCTGCCAGGTAAAGCCAGCTATGAAACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000557883.2 ENST00000559992.5 ENST00000658097.1 ENST00000669882.1 |
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| CDS TCA 72 bp | GTCCAAGATCAATGTGCTGGCAGATTTGATGTCTGGTaGGAGCTGCTTTCTGCTTCCAAGAGGGCAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VQDQCAGRFDVW*ELLSASKRAAC Trigger: ACAAGCTGCCCTCTTGGAAGCAGAAAGCAGCTCTCACCAGACATCAAATCTGCCAGCACATTGATCTTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558081.3 ENST00000658097.1 |
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| CDS CCA 72 bp | TCAGGCTCATCCCTCGCAGACAGTAGTTCTGAAGGGTaGGAAGTCCAAGATCAATGTGCTGGCAGATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SGSSLADSSSEG*EVQDQCAGRFD Trigger: ATCAAATCTGCCAGCACATTGATCTTGGACTTCCCACCCTTCAGAACTACTGTCTGCGAGGGATGAGCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558081.3 ENST00000658097.1 |
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| CDS CCA 72 bp | CAGGCACCTCTGATGAGATCTCCTCTTATCTCCCCTTaGGTGGTACCAAGTGCTTCTGAGTTGCAGATAACT | + |
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Preference number: 6 (lower is better) Translates to: QAPLMRSPLISP*VVPSASELQIT Trigger: AGTTATCTGCAACTCAGAAGCACTTGGTACCACCCAAGGGGAGATAAGAGGAGATCTCATCAGAGGTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557883.2 ENST00000669882.1 |
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| CDS TCA 72 bp | GTCCAAGATCAAGGTGCCAGTAGGTTCAGTGTCTGGTaGAGGTCAACTTCCTGTTTCATAGCTGGCTTTACC | + |
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Preference number: 6 (lower is better) Translates to: VQDQGASRFSVW*RSTSCFIAGFT Trigger: GGTAAAGCCAGCTATGAAACAGGAAGTTGACCTTCACCAGACACTGAACCTACTGGCACCTTGATCTTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000557883.2 ENST00000559992.5 ENST00000658097.1 ENST00000669882.1 |
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| CDS TCA 72 bp | TCCTCTTATCTCCCCTTGGGTGGTACCAAGTGCTTCTaGGTTGCAGATAACTTCAGCCGGCTTGCTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSYLPLGGTKCF*VADNFSRLASF Trigger: AAAAGAAGCAAGCCGGCTGAAGTTATCTGCAACTCAGAAGCACTTGGTACCACCCAAGGGGAGATAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557883.2 ENST00000669882.1 |
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| CDS CAA 72 bp | TTAGCATTGTTCCCCACTTTTCCCTTCCCACAGCCCTaGGCAATCCCTGTTCTACTTCCAGTCTGTAGATCT | + |
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Preference number: 6 (lower is better) Translates to: LALFPTFPFPQP*AIPVLLPVCRS Trigger: AGATCTACAGACTGGAAGTAGAACAGGGATTGCCAAGGGCTGTGGGAAGGGAAAAGTGGGGAACAATGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CAA 90 bp | ATATCATCTCTTATCTCCCCTTGGGTGGTACCAAGTGCTTCTGAGTaGCAGATAACTTCAGCCGGCTTGCTTCTTTTCAGGACTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ISSLISPWVVPSASE*QITSAGLLLFRTGF Trigger: GAAGCCAGTCCTGAAAAGAAGCAAGCCGGCTGAAGTTATCTGCAACTCAGAAGCACTTGGTACCACCCAAGGGGAGATAAGAGATGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658097.1 |
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| CDS TCA 72 bp | ATCTCTTATCTCCCCTTGGGTGGTACCAAGTGCTTCTaGGTTGCAGATAACTTCAGCCGGCTTGCTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ISYLPLGGTKCF*VADNFSRLASF Trigger: AAAAGAAGCAAGCCGGCTGAAGTTATCTGCAACTCAGAAGCACTTGGTACCACCCAAGGGGAGATAAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658097.1 |
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| CDS GCA 72 bp | TTACATAGGGCTCTGGTAGACTGGAGACTCTCCTTGTaGCTTGATGAAGTACACAGCTATGCTGGAGAAATC | + |
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Preference number: 6 (lower is better) Translates to: LHRALVDWRLSL*LDEVHSYAGEI Trigger: GATTTCTCCAGCATAGCTGTGTACTTCATCAAGGCACAAGGAGAGTCTCCAGTCTACCAGAGCCCTATGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CAA 72 bp | CCAAGTGCTTCTGAGTTGCAGATAACTTCAGCCGGCTaGCTTCTTTTCAGGACTGGCTTCTATGTGCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: PSASELQITSAG*LLFRTGFYVQL Trigger: TAACTGCACATAGAAGCCAGTCCTGAAAAGAAGCAAGCCGGCTGAAGTTATCTGCAACTCAGAAGCACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000557883.2 ENST00000658097.1 ENST00000669882.1 |
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| CDS TCA 72 bp | CCAAATGAATTGGAGAATAAGGAGTCATGTCAAGGTTaGGAACATCCAGAAAGCCAAGCAAGACCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PNELENKESCQG*EHPESQARPGL Trigger: CAGCCCTGGTCTTGCTTGGCTTTCTGGATGTTCTCAACCTTGACATGACTCCTTATTCTCCAATTCATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558897.1 |
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| CDS GCA 72 bp | AAGAGTAAACTTACTGGGTCATATGGCGACTCCGTTTaGCTGCAGAAGAATGGGACTGTGATTCCTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: KSKLTGSYGDSV*LQKNGTVIPRE Trigger: TTCTCTAGGAATCACAGTCCCATTCTTCTGCAGGCAAACGGAGTCGCCATATGACCCAGTAAGTTTACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS GCA 72 bp | CAGCCGGCTTGCTTCTTTTCAGGACTGGCTTCTATGTaGAGTTACATTGTACCTTTCTCTTCTTTCCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: QPACFFSGLASM*SYIVPFSSFPS Trigger: ACTTGGGAAAGAAGAGAAAGGTACAATGTAACTGCACATAGAAGCCAGTCCTGAAAAGAAGCAAGCCGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000557883.2 ENST00000658097.1 ENST00000669882.1 |
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| CDS CAA 72 bp | CATTTTGACAAGAATGAAGTCCAGTTTGATGTAGCATaGGCCACCCAGTGGGAACAAACTTCCAGGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HFDKNEVQFDVA*ATQWEQTSRFH Trigger: GTGGAACCTGGAAGTTTGTTCCCACTGGGTGGCCAATGCTACATCAAACTGGACTTCATTCTTGTCAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669882.1 |
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| CDS CAA 90 bp | GATTATGTTACATTACATAGGGCTCTGGTAGACTGGAGACTCTCCTaGTGCCTTGATGAAGTACACAGCTATGCTGGAGAAATCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: DYVTLHRALVDWRLS*CLDEVHSYAGEIHV Trigger: CACATGGATTTCTCCAGCATAGCTGTGTACTTCATCAAGGCACAAGGAGAGTCTCCAGTCTACCAGAGCCCTATGTAATGTAACATAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CCA 72 bp | GTTGATTATGTTACATTACATAGGGCTCTGGTAGACTaGAGACTCTCCTTGTGCCTTGATGAAGTACACAGC | + |
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Preference number: 6 (lower is better) Translates to: VDYVTLHRALVD*RLSLCLDEVHS Trigger: GCTGTGTACTTCATCAAGGCACAAGGAGAGTCTCCAGTCTACCAGAGCCCTATGTAATGTAACATAATCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CCA 72 bp | GCAGATAACTTCAGCCGGCTTGCTTCTTTTCAGGACTaGCTTCTATGTGCAGTTACATTGTACCTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ADNFSRLASFQD*LLCAVTLYLSL Trigger: AAGAGAAAGGTACAATGTAACTGCACATAGAAGCCAGTCCTGAAAAGAAGCAAGCCGGCTGAAGTTATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000557883.2 ENST00000658097.1 ENST00000669882.1 |
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| CDS CCA 72 bp | CTAGGAAGGATGATCATATCATCTCTTATCTCCCCTTaGGTGGTACCAAGTGCTTCTGAGTTGCAGATAACT | + |
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Preference number: 6 (lower is better) Translates to: LGRMIISSLISP*VVPSASELQIT Trigger: AGTTATCTGCAACTCAGAAGCACTTGGTACCACCCAAGGGGAGATAAGAGATGATATGATCATCCTTCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658097.1 |
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| CDS CAA 72 bp | TTATTATCCCATAAAGAAAGCTCTTACCCATTAGCATaGTTCCCCACTTTTCCCTTCCCACAGCCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LLSHKESSYPLA*FPTFPFPQPLA Trigger: TGCCAAGGGCTGTGGGAAGGGAAAAGTGGGGAACAATGCTAATGGGTAAGAGCTTTCTTTATGGGATAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS TCA 72 bp | TTTCCTGTAGAGATCCCCCTGATTGCTGGTTTCCTTTaGAATGAAACCACAGCTTTTCAAGTAGAACTTCGC | + |
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Preference number: 6 (lower is better) Translates to: FPVEIPLIAGFL*NETTAFQVELR Trigger: GCGAAGTTCTACTTGAAAAGCTGTGGTTTCATTTCAAAGGAAACCAGCAATCAGGGGGATCTCTACAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558897.1 |
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| CDS CAA 90 bp | GCTGTGGTCCTTTGTGACCGGCTTCTTTCTTTTAGCATAATGTACTaGAGGTTCATCCATGTTGTTGCATGTCTCAGCATTCCATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: AVVLCDRLLSFSIMY*RFIHVVACLSIPFL Trigger: AAGAAATGGAATGCTGAGACATGCAACAACATGGATGAACCTCAAGTACATTATGCTAAAAGAAAGAAGCCGGTCACAAAGGACCACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CAA 72 bp | CTTTGTGACCGGCTTCTTTCTTTTAGCATAATGTACTaGAGGTTCATCCATGTTGTTGCATGTCTCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: LCDRLLSFSIMY*RFIHVVACLSI Trigger: AATGCTGAGACATGCAACAACATGGATGAACCTCAAGTACATTATGCTAAAAGAAAGAAGCCGGTCACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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| CDS CAA 72 bp | TACTTCCAGTCTGTAGATCTGCCTATTCTGGACATTTaGTATAAATGGAATCATGCAAGCTGTGGTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: YFQSVDLPILDI*YKWNHASCGPL Trigger: CAAAGGACCACAGCTTGCATGATTCCATTTATACAAAATGTCCAGAATAGGCAGATCTACAGACTGGAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558081.3 |
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