Pregenerated sensors for LINC02333 (Homo sapiens)
Ensembl gene IDs: ENSG00000271564Ensembl transcript IDs: ENST00000603464.1, ENST00000668752.1, ENST00000669671.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTGGCGTGGAGAAGCAGGAACCTTCAGAAGAGTGGTCACCTCTGTTaGGAAGCAAGGGGACTGGATCAGAGAAGAAATTCCAGCAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LAWRSRNLQKSGHLC*EARGLDQRRNSSSP Trigger: AGGACTGCTGGAATTTCTTCTCTGATCCAGTCCCCTTGCTTCGCAACAGAGGTGACCACTCTTCTGAAGGTTCCTGCTTCTCCACGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669671.1 |
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| CDS GCA 90 bp | AATACTCAGCCTCAGCCCAGTTCTGTGCCCTTGCTGGAGAGGTGTTaGGGTCATTTGGATGAAAAGAGACACTCTAGCTGTTGTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: NTQPQPSSVPLLERC*GHLDEKRHSSCCVV Trigger: GACCACACAACAGCTAGAGTGTCTCTTTTCATCCAAATGACCGCAACACCTCTCCAGCAAGGGCACAGAACTGGGCTGAGGCTGAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603464.1 |
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| CDS CCA 90 bp | GGAGAATTAAGTTCTGTTCATATAACTCCACAGGGAGAAGACAACTaGAAGCTGCTCCTGGTTCTGCCTGGACTCTGCCCTAAGTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: GELSSVHITPQGEDN*KLLLVLPGLCPKCL Trigger: AAGGCACTTAGGGCAGAGTCCAGGCAGAACCAGGAGCAGCTTCCAGTTGTCTTCTCCCTGTGGAGTTATATGAACAGAACTTAATTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669671.1 |
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| CDS TCA 90 bp | GCACATCCCATGTTGAGAATATCTCCTTGGACACAAAAGTTTGTGTaGGCATCCCTGGTTGACAATTCTTTGTCCATATTGTCACACGTC | + |
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Preference number: 5 (lower is better) Translates to: AHPMLRISPWTQKFV*ASLVDNSLSILSHV Trigger: GACGTGTGACAATATGGACAAAGAATTGTCAACCAGGGATGCTCACACAAACTTTTGTGTCCAAGGAGATATTCTCAACATGGGATGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000668752.1 ENST00000669671.1 |
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| CDS CCA 90 bp | TGTAGCTTCCACGGGACTAGAAATGTTTCATTCTGCATGAGGTCATaGGTTTATGGATGTTATTTAATTGTTATGCTTCATAACTTAGAT | + |
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Preference number: 5 (lower is better) Translates to: CSFHGTRNVSFCMRS*VYGCYLIVMLHNLD Trigger: ATCTAAGTTATGAAGCATAACAATTAAATAACATCCATAAACCCATGACCTCATGCAGAATGAAACATTTCTAGTCCCGTGGAAGCTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000603464.1 ENST00000668752.1 ENST00000669671.1 |
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| CDS GCA 72 bp | CACAGGGAGAAGACAACTGGAAGCTGCTCCTGGTTCTaGCTGGACTCTGCCCTAAGTGCCTTTTTCCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: HREKTTGSCSWF*LDSALSAFFLP Trigger: CGGAAGGAAAAAGGCACTTAGGGCAGAGTCCAGGCAGAACCAGGAGCAGCTTCCAGTTGTCTTCTCCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669671.1 |
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| CDS CAA 90 bp | CCTCAGCCCAGTTCTGTGCCCTTGCTGGAGAGGTGTTGCGGTCATTaGGATGAAAAGAGACACTCTAGCTGTTGTGTGGTCTCCCTGATG | + |
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Preference number: 6 (lower is better) Translates to: PQPSSVPLLERCCGH*DEKRHSSCCVVSLM Trigger: CATCAGGGAGACCACACAACAGCTAGAGTGTCTCTTTTCATCCAAATGACCGCAACACCTCTCCAGCAAGGGCACAGAACTGGGCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603464.1 |
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| CDS GCA 72 bp | CCTCAGCCCAGTTCTGTGCCCTTGCTGGAGAGGTGTTaGGGTCATTTGGATGAAAAGAGACACTCTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PQPSSVPLLERC*GHLDEKRHSSC Trigger: ACAGCTAGAGTGTCTCTTTTCATCCAAATGACCGCAACACCTCTCCAGCAAGGGCACAGAACTGGGCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603464.1 |
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| CDS CCA 72 bp | GCAATACTCAGCCTCAGCCCAGTTCTGTGCCCTTGCTaGAGAGGTGTTGCGGTCATTTGGATGAAAAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: AILSLSPVLCPC*RGVAVIWMKRD Trigger: GTCTCTTTTCATCCAAATGACCGCAACACCTCTCCAGCAAGGGCACAGAACTGGGCTGAGGCTGAGTATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603464.1 |
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| CDS CAA 90 bp | ATTGGCGTGGAGAAGCAGGAACCTTCAGAAGAGTGGTCACCTCTGTaGCGAAGCAAGGGGACTGGATCAGAGAAGAAATTCCAGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: IGVEKQEPSEEWSPL*RSKGTGSEKKFQQS Trigger: GGACTGCTGGAATTTCTTCTCTGATCCAGTCCCCTTGCTTCGCAACAGAGGTGACCACTCTTCTGAAGGTTCCTGCTTCTCCACGCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669671.1 |
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| CDS GCA 72 bp | TCAGCAATACTCAGCCTCAGCCCAGTTCTGTGCCCTTaGTGGAGAGGTGTTGCGGTCATTTGGATGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SAILSLSPVLCP*WRGVAVIWMKR Trigger: TCTTTTCATCCAAATGACCGCAACACCTCTCCAGCAAGGGCACAGAACTGGGCTGAGGCTGAGTATTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603464.1 |
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| CDS CCA 72 bp | AGTTCTGTTCATATAACTCCACAGGGAGAAGACAACTaGAAGCTGCTCCTGGTTCTGCCTGGACTCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SSVHITPQGEDN*KLLLVLPGLCP Trigger: AGGGCAGAGTCCAGGCAGAACCAGGAGCAGCTTCCAGTTGTCTTCTCCCTGTGGAGTTATATGAACAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669671.1 |
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| CDS GCA 72 bp | AGAAGCAGGAACCTTCAGAAGAGTGGTCACCTCTGTTaGGAAGCAAGGGGACTGGATCAGAGAAGAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: RSRNLQKSGHLC*EARGLDQRRNS Trigger: GGAATTTCTTCTCTGATCCAGTCCCCTTGCTTCGCAACAGAGGTGACCACTCTTCTGAAGGTTCCTGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669671.1 |
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| CDS CCA 72 bp | GTTCTGTGCCCTTGCTGGAGAGGTGTTGCGGTCATTTaGATGAAAAGAGACACTCTAGCTGTTGTGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VLCPCWRGVAVI*MKRDTLAVVWS Trigger: AGACCACACAACAGCTAGAGTGTCTCTTTTCATCCAAATGACCGCAACACCTCTCCAGCAAGGGCACAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603464.1 |
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| CDS CAA 72 bp | AGTTCTGTGCCCTTGCTGGAGAGGTGTTGCGGTCATTaGGATGAAAAGAGACACTCTAGCTGTTGTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSVPLLERCCGH*DEKRHSSCCVV Trigger: GACCACACAACAGCTAGAGTGTCTCTTTTCATCCAAATGACCGCAACACCTCTCCAGCAAGGGCACAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603464.1 |
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| CDS CAA 72 bp | GAGAAGCAGGAACCTTCAGAAGAGTGGTCACCTCTGTaGCGAAGCAAGGGGACTGGATCAGAGAAGAAATTC | + |
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Preference number: 6 (lower is better) Translates to: EKQEPSEEWSPL*RSKGTGSEKKF Trigger: GAATTTCTTCTCTGATCCAGTCCCCTTGCTTCGCAACAGAGGTGACCACTCTTCTGAAGGTTCCTGCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669671.1 |
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| CDS CCA 72 bp | TATCTCCTTGGACACAAAAGTTTGTGTGAGCATCCCTaGTTGACAATTCTTTGTCCATATTGTCACACGTCA | + |
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Preference number: 6 (lower is better) Translates to: YLLGHKSLCEHP*LTILCPYCHTS Trigger: TGACGTGTGACAATATGGACAAAGAATTGTCAACCAGGGATGCTCACACAAACTTTTGTGTCCAAGGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000668752.1 ENST00000669671.1 |
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| CDS TCA 72 bp | ATGTTGAGAATATCTCCTTGGACACAAAAGTTTGTGTaGGCATCCCTGGTTGACAATTCTTTGTCCATATTG | + |
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Preference number: 6 (lower is better) Translates to: MLRISPWTQKFV*ASLVDNSLSIL Trigger: CAATATGGACAAAGAATTGTCAACCAGGGATGCTCACACAAACTTTTGTGTCCAAGGAGATATTCTCAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000668752.1 ENST00000669671.1 |
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| CDS GCA 72 bp | TCCTGTAGCTTCCACGGGACTAGAAATGTTTCATTCTaGATGAGGTCATGGGTTTATGGATGTTATTTAATT | + |
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Preference number: 6 (lower is better) Translates to: SCSFHGTRNVSF*MRSWVYGCYLI Trigger: AATTAAATAACATCCATAAACCCATGACCTCATGCAGAATGAAACATTTCTAGTCCCGTGGAAGCTACAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000603464.1 ENST00000668752.1 ENST00000669671.1 |
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| CDS CAA 72 bp | TGGTTGACAATTCTTTGTCCATATTGTCACACGTCATaGCTGGGAGAATTAAGTTCTGTTCATATAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: WLTILCPYCHTS*LGELSSVHITP Trigger: TGGAGTTATATGAACAGAACTTAATTCTCCCAGCAATGACGTGTGACAATATGGACAAAGAATTGTCAACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000668752.1 ENST00000669671.1 |
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