Pregenerated sensors for LINC02330 (Homo sapiens)

Ensembl gene IDs: ENSG00000258770

Ensembl transcript IDs: ENST00000557784.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CATACCAAGAATTTTGGAGATAGATTGTTTACAGCGTTGATTCAGTaGTTCAACAACATTAAGGTCAACTCTTCTGCTGTTCTCTCAGTC	+
Preference number: 5 (lower is better) Translates to: HTKNFGDRLFTALIQ*FNNIKVNSSAVLSV Trigger: GACTGAGAGAACAGCAGAAGAGTTGACCTTAATGTTGTTGAACCACTGAATCAACGCTGTAAACAATCTATCTCCAAAATTCTTGGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557784.1
CDS CCA 72 bp	AGGAGTCGGTCTTACTGTCTCGGGGGCAGCAGCAGCTaGCAGGGCCCATGTTACTTCTGCCCATTCCGTTGG	+
Preference number: 6 (lower is better) Translates to: RSRSYCLGGSSS*QGPCYFCPFRW Trigger: CCAACGGAATGGGCAGAAGTAACATGGGCCCTGCCAGCTGCTGCTGCCCCCGAGACAGTAAGACCGACTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557784.1
CDS GCA 72 bp	GGGGGCAGCAGCAGCTGGCAGGGCCCATGTTACTTCTaGCCATTCCGTTGGCCACAACTCTGTTACATGGTT	+
Preference number: 6 (lower is better) Translates to: GGSSSWQGPCYF*PFRWPQLCYMV Trigger: AACCATGTAACAGAGTTGTGGCCAACGGAATGGGCAGAAGTAACATGGGCCCTGCCAGCTGCTGCTGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557784.1
CDS CAA 90 bp	GGGCAGCAGCAGCTGGCAGGGCCCATGTTACTTCTGCCCATTCCGTaGGCCACAACTCTGTTACATGGTTGCATCTATTTGCATGGGAGA	+
Preference number: 6 (lower is better) Translates to: GQQQLAGPMLLLPIP*ATTLLHGCIYLHGR Trigger: TCTCCCATGCAAATAGATGCAACCATGTAACAGAGTTGTGGCCAACGGAATGGGCAGAAGTAACATGGGCCCTGCCAGCTGCTGCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557784.1
CDS CAA 72 bp	CCGTTGGCCACAACTCTGTTACATGGTTGCATCTATTaGCATGGGAGACTGGGGCATAATCTGATTGAATGT	+
Preference number: 6 (lower is better) Translates to: PLATTLLHGCIY*HGRLGHNLIEC Trigger: ACATTCAATCAGATTATGCCCCAGTCTCCCATGCAAATAGATGCAACCATGTAACAGAGTTGTGGCCAACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557784.1
CDS CCA 72 bp	GTCCAGGTCACGTGGATACTCTTAGTAATCATTCACTaGAAGTGGATCGTCACAAAGATCTTCATTCTTGTC	+
Preference number: 6 (lower is better) Translates to: VQVTWILLVIIH*KWIVTKIFILV Trigger: GACAAGAATGAAGATCTTTGTGACGATCCACTTCCAGTGAATGATTACTAAGAGTATCCACGTGACCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557784.1
CDS CCA 72 bp	GTCACGTGGATACTCTTAGTAATCATTCACTGGAAGTaGATCGTCACAAAGATCTTCATTCTTGTCTTCACA	+
Preference number: 6 (lower is better) Translates to: VTWILLVIIHWK*IVTKIFILVFT Trigger: TGTGAAGACAAGAATGAAGATCTTTGTGACGATCCACTTCCAGTGAATGATTACTAAGAGTATCCACGTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557784.1
CDS CCA 72 bp	AATTTTGGAGATAGATTGTTTACAGCGTTGATTCAGTaGTTCAACAACATTAAGGTCAACTCTTCTGCTGTT	+
Preference number: 6 (lower is better) Translates to: NFGDRLFTALIQ*FNNIKVNSSAV Trigger: AACAGCAGAAGAGTTGACCTTAATGTTGTTGAACCACTGAATCAACGCTGTAAACAATCTATCTCCAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557784.1
CDS TCA 72 bp	ATACCAAGAATTTTGGAGATAGATTGTTTACAGCGTTaGTTCAGTGGTTCAACAACATTAAGGTCAACTCTT	+
Preference number: 6 (lower is better) Translates to: IPRILEIDCLQR*FSGSTTLRSTL Trigger: AAGAGTTGACCTTAATGTTGTTGAACCACTGAATCAACGCTGTAAACAATCTATCTCCAAAATTCTTGGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557784.1

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