Pregenerated sensors for LINC02328 (Homo sapiens)
Ensembl gene IDs: ENSG00000258733Ensembl transcript IDs: ENST00000553668.2, ENST00000557195.5, ENST00000654590.1, ENST00000654941.1, ENST00000655493.1, ENST00000659242.1, ENST00000663635.1, ENST00000665938.1, ENST00000667571.1, ENST00000668344.1, ENST00000668922.1, ENST00000671341.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATTCCACACAGGAAGAGGAGGGGCCAGGCTCCTCCCAGGTGCAAATaGCCCGGACTTCTGTGGCTCCACCTCAGTGCTCAGGCAGATTGG | + |
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Preference number: 5 (lower is better) Translates to: IPHRKRRGQAPPRCK*PGLLWLHLSAQADW Trigger: CCAATCTGCCTGAGCACTGAGGTGGAGCCACAGAAGTCCGGGTCATTTGCACCTGGGAGGAGCCTGGCCCCTCCTCTTCCTGTGTGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000553668.2 ENST00000654590.1 ENST00000654941.1 ENST00000659242.1 ENST00000663635.1 ENST00000667571.1 ENST00000668922.1 ENST00000671341.1 |
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| CDS CCA 90 bp | CAGACTCAAGGCCCTCCAAGTCTTTCACAGAGAGTTTATTCAAGCTaGGATTCCAAATGTAGGGACTACTCCGCGTGGCTGGCATCAGCA | + |
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Preference number: 5 (lower is better) Translates to: QTQGPPSLSQRVYSS*DSKCRDYSAWLASA Trigger: TGCTGATGCCAGCCACGCGGAGTAGTCCCTACATTTGGAATCCCAGCTTGAATAAACTCTCTGTGAAAGACTTGGAGGGCCTTGAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665938.1 |
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| CDS TCA 90 bp | TGGTTACATGGAAAAGCTCTTCAGTGGCGATTTCTAAGATTTTGGTaGACCCGTCACTTGAGCAGTGTACATTGTACCCAGCGTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: WLHGKALQWRFLRFW*TRHLSSVHCTQRVV Trigger: GACTACACGCTGGGTACAATGTACACTGCTCAAGTGACGGGTTCACCAAAATCTTAGAAATCGCCACTGAAGAGCTTTTCCATGTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655493.1 |
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| CDS GCA 90 bp | GCAGCAACAATCTCATTAACTAGCTCTGCAAGACAGAAAAGCTCCTaGGCAGTTTTCATGCTGATCAGAAACATGCTGGCACCAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: AATISLTSSARQKSS*AVFMLIRNMLAPKK Trigger: CTTCTTTGGTGCCAGCATGTTTCTGATCAGCATGAAAACTGCGCAGGAGCTTTTCTGTCTTGCAGAGCTAGTTAATGAGATTGTTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000553668.2 ENST00000654941.1 ENST00000659242.1 ENST00000671341.1 |
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| CDS TCA 90 bp | GCACCTGATACCATTGCTCTTCAAGCTTATAGAGAACAGCTCTGGTaGGTCTTCATCACACGATCTCTTTGTTTGAGGAAGAATAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: APDTIALQAYREQLW*VFITRSLCLRKNSP Trigger: AGGACTATTCTTCCTCAAACAAAGAGATCGTGTGATGAAGACTCACCAGAGCTGTTCTCTATAAGCTTGAAGAGCAATGGTATCAGGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557195.5 |
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| CDS TCA 90 bp | ATAGAGAACAGCTCTGGTGAGTCTTCATCACACGATCTCTTTGTTTaGGGAAGAATAGTCCTGTTCATTTTCATTCAACTCAGCAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: IENSSGESSSHDLFV*GRIVLFIFIQLSSP Trigger: GGGACTGCTGAGTTGAATGAAAATGAACAGGACTATTCTTCCTCAAACAAAGAGATCGTGTGATGAAGACTCACCAGAGCTGTTCTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654941.1 |
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| CDS TCA 90 bp | ATAGAGAACAGCTCTGGTGAGTCTTCATCACACGATCTCTTTGTTTaGGGAAGAATAGTCCTGTTCATTTTCTGTAGTCCTACCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: IENSSGESSSHDLFV*GRIVLFIFCSPTTL Trigger: CAAAGTGGTAGGACTACAGAAAATGAACAGGACTATTCTTCCTCAAACAAAGAGATCGTGTGATGAAGACTCACCAGAGCTGTTCTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557195.5 |
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| CDS TCA 90 bp | TTCACTGATACCATTGCTCTTCAAGCTTATAGAGAACAGCTCTGGTaGGTCTTCATCACACGATCTCTTTGTTTGAGGAAGAATAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: FTDTIALQAYREQLW*VFITRSLCLRKNSP Trigger: AGGACTATTCTTCCTCAAACAAAGAGATCGTGTGATGAAGACTCACCAGAGCTGTTCTCTATAAGCTTGAAGAGCAATGGTATCAGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654941.1 ENST00000668922.1 |
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| CDS GCA 90 bp | CGAGGGGCAATTAGGCTGGTTCCATATTTTTGCAATTGCAACTTGTaGTGTTATAAACATGCATGTGCTTATCTTTCTCATATAATAACT | + |
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Preference number: 5 (lower is better) Translates to: RGAIRLVPYFCNCNL*CYKHACAYLSHIIT Trigger: AGTTATTATATGAGAAAGATAAGCACATGCATGTTTATAACAGCACAAGTTGCAATTGCAAAAATATGGAACCAGCCTAATTGCCCCTCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655493.1 ENST00000668344.1 |
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| CDS CCA 72 bp | GCTGGGATTCCAAATGTAGGGACTACTCCGCGTGGCTaGCATCAGCAACCAGAATCCCGCAGTTCACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: AGIPNVGTTPRG*HQQPESRSSQL Trigger: TAGCTGTGAACTGCGGGATTCTGGTTGCTGATGCCAGCCACGCGGAGTAGTCCCTACATTTGGAATCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665938.1 |
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| CDS GCA 72 bp | GTGCAAATGACCCGGACTTCTGTGGCTCCACCTCAGTaGTCAGGCAGATTGGAGTTTTGCCAGGGAACTCTT | + |
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Preference number: 6 (lower is better) Translates to: VQMTRTSVAPPQ*SGRLEFCQGTL Trigger: AAGAGTTCCCTGGCAAAACTCCAATCTGCCTGAGCACTGAGGTGGAGCCACAGAAGTCCGGGTCATTTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000553668.2 ENST00000654590.1 ENST00000654941.1 ENST00000659242.1 ENST00000663635.1 ENST00000667571.1 ENST00000668922.1 ENST00000671341.1 |
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| CDS CCA 72 bp | TCAAGCTGGGATTCCAAATGTAGGGACTACTCCGCGTaGCTGGCATCAGCAACCAGAATCCCGCAGTTCACA | + |
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Preference number: 6 (lower is better) Translates to: SSWDSKCRDYSA*LASATRIPQFT Trigger: TGTGAACTGCGGGATTCTGGTTGCTGATGCCAGCCACGCGGAGTAGTCCCTACATTTGGAATCCCAGCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665938.1 |
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| CDS CAA 90 bp | TGCACACTGAGGGCCTTCATGACCTTCATGACCCAGCTTCACCTTTaGATGTATAGGGCCATTCAACTCAGCAGTCCCACTGAGACGAGA | + |
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Preference number: 6 (lower is better) Translates to: CTLRAFMTFMTQLHL*MYRAIQLSSPTETR Trigger: TCTCGTCTCAGTGGGACTGCTGAGTTGAATGGCCCTATACATCAAAAGGTGAAGCTGGGTCATGAAGGTCATGAAGGCCCTCAGTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659242.1 ENST00000668922.1 |
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| CDS CCA 72 bp | GGCCCTCCAAGTCTTTCACAGAGAGTTTATTCAAGCTaGGATTCCAAATGTAGGGACTACTCCGCGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GPPSLSQRVYSS*DSKCRDYSAWL Trigger: CAGCCACGCGGAGTAGTCCCTACATTTGGAATCCCAGCTTGAATAAACTCTCTGTGAAAGACTTGGAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665938.1 |
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| CDS CAA 72 bp | AGGGCCTTCATGACCTTCATGACCCAGCTTCACCTTTaGATGTATAGGGCCATTCAACTCAGCAGTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: RAFMTFMTQLHL*MYRAIQLSSPT Trigger: AGTGGGACTGCTGAGTTGAATGGCCCTATACATCAAAAGGTGAAGCTGGGTCATGAAGGTCATGAAGGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659242.1 ENST00000668922.1 |
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| CDS TCA 72 bp | CTGCAAGACAGAAAAGCTCCTGCGCAGTTTTCATGCTaGTCAGAAACATGCTGGCACCAAAGAAGCCAATGT | + |
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Preference number: 6 (lower is better) Translates to: LQDRKAPAQFSC*SETCWHQRSQC Trigger: ACATTGGCTTCTTTGGTGCCAGCATGTTTCTGATCAGCATGAAAACTGCGCAGGAGCTTTTCTGTCTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000553668.2 ENST00000654941.1 ENST00000659242.1 ENST00000671341.1 |
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| CDS TCA 72 bp | GGAAAAGCTCTTCAGTGGCGATTTCTAAGATTTTGGTaGACCCGTCACTTGAGCAGTGTACATTGTACCCAG | + |
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Preference number: 6 (lower is better) Translates to: GKALQWRFLRFW*TRHLSSVHCTQ Trigger: CTGGGTACAATGTACACTGCTCAAGTGACGGGTTCACCAAAATCTTAGAAATCGCCACTGAAGAGCTTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655493.1 |
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| CDS CAA 90 bp | CTTTTGGTTACATGGAAAAGCTCTTCAGTGGCGATTTCTAAGATTTaGGTGAACCCGTCACTTGAGCAGTGTACATTGTACCCAGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: LLVTWKSSSVAISKI*VNPSLEQCTLYPAC Trigger: ACACGCTGGGTACAATGTACACTGCTCAAGTGACGGGTTCACCAAAATCTTAGAAATCGCCACTGAAGAGCTTTTCCATGTAACCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655493.1 |
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| CDS CCA 72 bp | TTTACCACATCCACACCAAAATCTGTGACCAGGATCTaGCACCAAAGAAGCCAATGTGTGAATGCTTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: FTTSTPKSVTRI*HQRSQCVNACL Trigger: TAGACAAGCATTCACACATTGGCTTCTTTGGTGCCAGATCCTGGTCACAGATTTTGGTGTGGATGTGGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655493.1 ENST00000668344.1 |
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| CDS CCA 72 bp | GGTGGAGGCAGTCAAAAGGCCACTGATCAAGGCCTTTaGGTAGTCTGCAGTTTAATTAAGACCAAATTACAA | + |
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Preference number: 6 (lower is better) Translates to: GGGSQKATDQGL*VVCSLIKTKLQ Trigger: TTGTAATTTGGTCTTAATTAAACTGCAGACTACCCAAAGGCCTTGATCAGTGGCCTTTTGACTGCCTCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667571.1 |
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| CDS TCA 72 bp | ACCATTGCTCTTCAAGCTTATAGAGAACAGCTCTGGTaGGTCTTCATCACACGATCTCTTTGTTTGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TIALQAYREQLW*VFITRSLCLRK Trigger: CTTCCTCAAACAAAGAGATCGTGTGATGAAGACTCACCAGAGCTGTTCTCTATAAGCTTGAAGAGCAATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000557195.5 ENST00000654941.1 ENST00000668922.1 |
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| CDS CCA 72 bp | TTCTTTATCCACTTGTTCACCGAGGGGCAATTAGGCTaGTTCCATATTTTTGCAATTGCAACTTGTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FFIHLFTEGQLG*FHIFAIATCAV Trigger: AACAGCACAAGTTGCAATTGCAAAAATATGGAACCAGCCTAATTGCCCCTCGGTGAACAAGTGGATAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655493.1 ENST00000668344.1 |
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| CDS CAA 72 bp | TCCATTGTGCAGATATACCACATTTTCTTTATCCACTaGTTCACCGAGGGGCAATTAGGCTGGTTCCATATT | + |
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Preference number: 6 (lower is better) Translates to: SIVQIYHIFFIH*FTEGQLGWFHI Trigger: AATATGGAACCAGCCTAATTGCCCCTCGGTGAACAAGTGGATAAAGAAAATGTGGTATATCTGCACAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655493.1 ENST00000668344.1 |
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| CDS TCA 72 bp | AGCTCTGGTGAGTCTTCATCACACGATCTCTTTGTTTaGGGAAGAATAGTCCTGTTCATTTTCATTCAACTC | + |
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Preference number: 6 (lower is better) Translates to: SSGESSSHDLFV*GRIVLFIFIQL Trigger: GAGTTGAATGAAAATGAACAGGACTATTCTTCCTCAAACAAAGAGATCGTGTGATGAAGACTCACCAGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654941.1 |
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| CDS TCA 72 bp | AGTTCAGCTAAAGATGGGGTCCTTGTTCCATGGTCATaGAAATTTAGGCTTGAAGACTATTTGAAGAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSAKDGVLVPWS*KFRLEDYLKSE Trigger: CTCACTCTTCAAATAGTCTTCAAGCCTAAATTTTCATGACCATGGAACAAGGACCCCATCTTTAGCTGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654590.1 ENST00000654941.1 ENST00000659242.1 ENST00000667571.1 ENST00000671341.1 |
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| CDS CCA 72 bp | GTTCAAAATGCAAATATTAGAATTAATACAGGATACTaGATACAGGCTACACCAACCAGCAGCCATACCAAA | + |
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Preference number: 6 (lower is better) Translates to: VQNANIRINTGY*IQATPTSSHTK Trigger: TTTGGTATGGCTGCTGGTTGGTGTAGCCTGTATCCAGTATCCTGTATTAATTCTAATATTTGCATTTTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654590.1 ENST00000667571.1 |
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