Pregenerated sensors for LINC02327 (Homo sapiens)
Ensembl gene IDs: ENSG00000258038Ensembl transcript IDs: ENST00000548087.5, ENST00000548775.2, ENST00000550122.5, ENST00000550827.5, ENST00000550990.1, ENST00000551588.6, ENST00000655423.1, ENST00000656401.1, ENST00000657083.1, ENST00000657120.1, ENST00000657147.1, ENST00000658814.1, ENST00000660501.1, ENST00000660700.1, ENST00000664085.1, ENST00000665952.1, ENST00000667065.1, ENST00000670211.1, ENST00000671154.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CGGGCGCCAGCAGTCCCAGCTGCTCCGGAAGCTGAGGCAGGAGAATaGCGTGACCCCGGGAGGCGGAGCTTGCAGCGAACCGATATCGCG | + |
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Preference number: 5 (lower is better) Translates to: RAPAVPAAPEAEAGE*RDPGRRSLQRTDIA Trigger: CGCGATATCGGTTCGCTGCAAGCTCCGCCTCCCGGGGTCACGTCATTCTCCTGCCTCAGCTTCCGGAGCAGCTGGGACTGCTGGCGCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671154.1 |
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| CDS GCA 90 bp | CGGAAGCTGAGGCAGGAGAATGACGTGACCCCGGGAGGCGGAGCTTaGAGCGAACCGATATCGCGATACTGCACTCCAGCCTGGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: RKLRQENDVTPGGGA*SEPISRYCTPAWAT Trigger: TGTCGCCCAGGCTGGAGTGCAGTATCGCGATATCGGTTCGCTGCAAGCTCCGCCTCCCGGGGTCACGTCATTCTCCTGCCTCAGCTTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671154.1 |
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| CDS CCA 90 bp | AGGTTGCCACTGGCTGGCTCTGGTGGCCAGCTTTTATTCCCTTATTaGCTCCGCCCACATCCTGCTGATTGGTCCATTTTACAGAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: RLPLAGSGGQLLFPY*LRPHPADWSILQSA Trigger: AGCGCTCTGTAAAATGGACCAATCAGCAGGATGTGGGCGGAGCCAATAAGGGAATAAAAGCTGGCCACCAGAGCCAGCCAGTGGCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS CCA 90 bp | CATGCCTGTGGCTCAAGGTCCCTCATGAGATTGTTTTCAAGCTTATaGCTGGGGCTGTGGTCTCATCTGAAGGTTTGTCTGGGAAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: HACGSRSLMRLFSSL*LGLWSHLKVCLGKS Trigger: ACTCTTTCCCAGACAAACCTTCAGATGAGACCACAGCCCCAGCCATAAGCTTGAAAACAATCTCATGAGGGACCTTGAGCCACAGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS GCA 90 bp | CCTATTCCAAGTGGCAGGACAAGTAATGGCCCAAGGAAGATATCATaGCCCAATCTCCAGAACCAGGACTCAGGTGCTTTTATTCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: PIPSGRTSNGPRKIS*PNLQNQDSGAFIQC Trigger: ACACTGAATAAAAGCACCTGAGTCCTGGTTCTGGAGATTGGGGCATGATATCTTCCTTGGGCCATTACTTGTCCTGCCACTTGGAATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS CCA 90 bp | TTGAAGTCTGTTGCCTGGATGCCACCCTCAGTTCCTTGCCACATATaGCTCTCCATAAACTCAAAACACAGCCATTGGCTTTCCAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LKSVAWMPPSVPCHI*LSINSKHSHWLSKL Trigger: CAACTTGGAAAGCCAATGGCTGTGTTTTGAGTTTATGGAGAGCCATATGTGGCAAGGAACTGAGGGTGGCATCCAGGCAACAGACTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000551588.6 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000660700.1 ENST00000671154.1 |
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| CDS CCA 90 bp | GTTTGTTCCTGTGATTGTTGGTCAGATTCAGTTCTTGTGGGTTGTTaGACTGACAGCCTCAGTTTCTTGAAGTCTGTTGCCTGGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: VCSCDCWSDSVLVGC*TDSLSFLKSVAWMP Trigger: TGGCATCCAGGCAACAGACTTCAAGAAACTGAGGCTGTCAGTCCAACAACCCACAAGAACTGAATCTGACCAACAATCACAGGAACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS GCA 90 bp | CTGGGTGACGGAGTGAGACATATTGTATTTTGCTGCATATTTATGTaGCCAGAATTGGTTCCTTCCAGTGGGTTCTTGGTCTCACTGACT | + |
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Preference number: 5 (lower is better) Translates to: LGDGVRHIVFCCIFM*PELVPSSGFLVSLT Trigger: AGTCAGTGAGACCAAGAACCCACTGGAAGGAACCAATTCTGGGCACATAAATATGCAGCAAAATACAATATGTCTCACTCCGTCACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660700.1 |
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| CDS CCA 90 bp | AGACTGGGCAATGAGATTGCTGAGAAACTATACTTTATGGACACATaGCTATTGCAAAGAGCCAGTGGATGTCCTCCCACCTACAATGCT | + |
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Preference number: 5 (lower is better) Translates to: RLGNEIAEKLYFMDT*LLQRASGCPPTYNA Trigger: AGCATTGTAGGTGGGAGGACATCCACTGGCTCTTTGCAATAGCCATGTGTCCATAAAGTATAGTTTCTCAGCAATCTCATTGCCCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548087.5 |
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| CDS TCA 90 bp | CAGTGTGGAAATAACACATTAGGCAGGACAAAGCCTCTGGCCTCCTaGCGTTATATTCAAGTAAGCCTCAAGAAGGTGTACCTTGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: QCGNNTLGRTKPLAS*RYIQVSLKKVYLVS Trigger: TGAAACAAGGTACACCTTCTTGAGGCTTACTTGAATATAACGTCAGGAGGCCAGAGGCTTTGTCCTGCCTAATGTGTTATTTCCACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548775.2 ENST00000550122.5 |
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| CDS GCA 90 bp | TATACCTCTTTGAACCATACTGTGCCACCGAACTGCAGGAAATGCTaGCCTTGTTGTTTTTCACTGGTCATATTGCCACACCTAGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: YTSLNHTVPPNCRKC*PCCFSLVILPHLAN Trigger: ATTTGCTAGGTGTGGCAATATGACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTATGGTTCAAAGAGGTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS GCA 90 bp | TTTTATACCTCTTTGAACCATACTGTGCCACCGAACTGCAGGAAATaGTGCCCTTGTTGTTTTTCACTGGTCATATTGCCACACCTAGCA | + |
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Preference number: 5 (lower is better) Translates to: FYTSLNHTVPPNCRK*CPCCFSLVILPHLA Trigger: TGCTAGGTGTGGCAATATGACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTATGGTTCAAAGAGGTATAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS GCA 90 bp | GTGACTTCCTTTTATACCTCTTTGAACCATACTGTGCCACCGAACTaGAGGAAATGCTGCCCTTGTTGTTTTTCACTGGTCATATTGCCA | + |
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Preference number: 5 (lower is better) Translates to: VTSFYTSLNHTVPPN*RKCCPCCFSLVILP Trigger: TGGCAATATGACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTATGGTTCAAAGAGGTATAAAAGGAAGTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS GCA 90 bp | GCAATGAGATTGCTGAGAAACTATACTTTATGGACACATGGCTATTaGAAAGAGCCAGTGGATGTCCTCCCACCTACAATGCTGGTACAA | + |
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Preference number: 5 (lower is better) Translates to: AMRLLRNYTLWTHGY*KEPVDVLPPTMLVQ Trigger: TTGTACCAGCATTGTAGGTGGGAGGACATCCACTGGCTCTTTGCAATAGCCATGTGTCCATAAAGTATAGTTTCTCAGCAATCTCATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548087.5 |
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| CDS CCA 90 bp | GCTAGACACAGAACGCTGATTGATGCGTTTTTACAGAGTGCTGATTaGTGCATCTACAAACCTTTAGCTAGACACAGAGCACTGATTGGT | + |
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Preference number: 5 (lower is better) Translates to: ARHRTLIDAFLQSAD*CIYKPLARHRALIG Trigger: ACCAATCAGTGCTCTGTGTCTAGCTAAAGGTTTGTAGATGCACCAATCAGCACTCTGTAAAAACGCATCAATCAGCGTTCTGTGTCTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS GCA 90 bp | AGGAAATGGACAAACAGAAGAATAGTGGGAGTTCTGGTGGATTTGTaGTCACTGTCCACACCACCATCAATACTAAGCTTTCCTACACTT | + |
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Preference number: 5 (lower is better) Translates to: RKWTNRRIVGVLVDL*SLSTPPSILSFPTL Trigger: AAGTGTAGGAAAGCTTAGTATTGATGGTGGTGTGGACAGTGAGCACAAATCCACCAGAACTCCCACTATTCTTCTGTTTGTCCATTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660501.1 |
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| CDS TCA 90 bp | ATCCATATGTCTATCCAAACACAAAAGACAGTGGCTGCTCTCTGCTaGGAAATGAAACGGAAATCTCCATTACAATACATTGCCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: IHMSIQTQKTVAALC*EMKRKSPLQYIASC Trigger: ACAGGAGGCAATGTATTGTAATGGAGATTTCCGTTTCATTTCTCAGCAGAGAGCAGCCACTGTCTTTTGTGTTTGGATAGACATATGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657120.1 ENST00000664085.1 |
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| CDS CCA 90 bp | AAATTCTGGGAAATGAAGACAAAGAGATTCCAAAACTGTGTGAGGTaGTGTTTGGAGAATTCAGGACTCAGGTGCTTTTATTCAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: KFWEMKTKRFQNCVR*CLENSGLRCFYSVW Trigger: CCACACTGAATAAAAGCACCTGAGTCCTGAATTCTCCAAACACCACCTCACACAGTTTTGGAATCTCTTTGTCTTCATTTCCCAGAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670211.1 |
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| CDS GCA 90 bp | AATGAAACGGAAATCTCCATTACAATACATTGCCTCCTGTATGAATaGTCTGCATTTCCAGCTGTCTTCACTGTATTAACTGATGTCATC | + |
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Preference number: 5 (lower is better) Translates to: NETEISITIHCLLYE*SAFPAVFTVLTDVI Trigger: GATGACATCAGTTAATACAGTGAAGACAGCTGGAAATGCAGAGCATTCATACAGGAGGCAATGTATTGTAATGGAGATTTCCGTTTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657120.1 ENST00000664085.1 |
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| CDS GCA 90 bp | TTTTTCTTATATCCATATGTCTATCCAAACACAAAAGACAGTGGCTaGTCTCTGCTGAGAAATGAAACGGAAATCTCCATTACAATACAT | + |
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Preference number: 5 (lower is better) Translates to: FFLYPYVYPNTKDSG*SLLRNETEISITIH Trigger: ATGTATTGTAATGGAGATTTCCGTTTCATTTCTCAGCAGAGAGCAGCCACTGTCTTTTGTGTTTGGATAGACATATGGATATAAGAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000657120.1 ENST00000664085.1 |
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| CDS TCA 72 bp | GCAGTCCCAGCTGCTCCGGAAGCTGAGGCAGGAGAATaGCGTGACCCCGGGAGGCGGAGCTTGCAGCGAACC | + |
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Preference number: 6 (lower is better) Translates to: AVPAAPEAEAGE*RDPGRRSLQRT Trigger: GGTTCGCTGCAAGCTCCGCCTCCCGGGGTCACGTCATTCTCCTGCCTCAGCTTCCGGAGCAGCTGGGACTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671154.1 |
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| CDS CAA 72 bp | CTTTTTGAAGTCCCCCAAGTTCTTAGCACAGCACTGTaGTCAAGAGTGTTGGCGGGTCGCGGTGGCTCACGC | + |
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Preference number: 6 (lower is better) Translates to: LFEVPQVLSTAL*SRVLAGRGGSR Trigger: GCGTGAGCCACCGCGACCCGCCAACACTCTTGACAACAGTGCTGTGCTAAGAACTTGGGGGACTTCAAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 17 transcripts: ENST00000548087.5 ENST00000548775.2 ENST00000550122.5 ENST00000550827.5 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657120.1 ENST00000657147.1 ENST00000658814.1 ENST00000660501.1 ENST00000664085.1 ENST00000665952.1 ENST00000667065.1 ENST00000670211.1 ENST00000671154.1 |
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| CDS GCA 72 bp | CAACCTCTAGGTCCAACAGGGGAAGTCCCTTCTTCCTaGAATGTCCATCTAGGGTCCTTCACTGAGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: QPLGPTGEVPSS*NVHLGSFTEEA Trigger: AGCTTCCTCAGTGAAGGACCCTAGATGGACATTGCAGGAAGAAGGGACTTCCCCTGTTGGACCTAGAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548087.5 ENST00000550122.5 |
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| CDS CCA 72 bp | TGGACTGACAGCCTCAGTTTCTTGAAGTCTGTTGCCTaGATGCCACCCTCAGTTCCTTGCCACATATGGCTC | + |
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Preference number: 6 (lower is better) Translates to: WTDSLSFLKSVA*MPPSVPCHIWL Trigger: GAGCCATATGTGGCAAGGAACTGAGGGTGGCATCCAGGCAACAGACTTCAAGAAACTGAGGCTGTCAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS CCA 72 bp | CTGGCTGGCTCTGGTGGCCAGCTTTTATTCCCTTATTaGCTCCGCCCACATCCTGCTGATTGGTCCATTTTA | + |
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Preference number: 6 (lower is better) Translates to: LAGSGGQLLFPY*LRPHPADWSIL Trigger: TAAAATGGACCAATCAGCAGGATGTGGGCGGAGCCAATAAGGGAATAAAAGCTGGCCACCAGAGCCAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS CCA 72 bp | CAGATTTCAGATGTGTCCGGAGTTTCTTCCTTCTGGTaGGTTCGTGGTCTCGCTGACTTCAGGAGTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: QISDVSGVSSFW*VRGLADFRSEA Trigger: GGCTTCACTCCTGAAGTCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCCGGACACATCTGAAATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660700.1 |
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| CDS CAA 72 bp | GTTCTTGTGGGTTGTTGGACTGACAGCCTCAGTTTCTaGAAGTCTGTTGCCTGGATGCCACCCTCAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VLVGCWTDSLSF*KSVAWMPPSVP Trigger: AGGAACTGAGGGTGGCATCCAGGCAACAGACTTCAAGAAACTGAGGCTGTCAGTCCAACAACCCACAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS GCA 72 bp | AGTGGCAGGACAAGTAATGGCCCAAGGAAGATATCATaGCCCAATCTCCAGAACCAGGACTCAGGTGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SGRTSNGPRKIS*PNLQNQDSGAF Trigger: AAAAGCACCTGAGTCCTGGTTCTGGAGATTGGGGCATGATATCTTCCTTGGGCCATTACTTGTCCTGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS CCA 72 bp | CTTCAGATTTCAGATGTGTCCGGAGTTTCTTCCTTCTaGTGGGTTCGTGGTCTCGCTGACTTCAGGAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LQISDVSGVSSF*WVRGLADFRSE Trigger: TTCACTCCTGAAGTCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCCGGACACATCTGAAATCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660700.1 |
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| CDS CAA 72 bp | CCATACTGTGCCACCGAACTGCAGGAAATGCTGCCCTaGTTGTTTTTCACTGGTCATATTGCCACACCTAGC | + |
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Preference number: 6 (lower is better) Translates to: PYCATELQEMLP*LFFTGHIATPS Trigger: GCTAGGTGTGGCAATATGACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS CAA 90 bp | CCTCAGTTTCTTGAAGTCTGTTGCCTGGATGCCACCCTCAGTTCCTaGCCACATATGGCTCTCCATAAACTCAAAACACAGCCATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PQFLEVCCLDATLSS*PHMALHKLKTQPLA Trigger: AGCCAATGGCTGTGTTTTGAGTTTATGGAGAGCCATATGTGGCAAGGAACTGAGGGTGGCATCCAGGCAACAGACTTCAAGAAACTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000671154.1 |
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| CDS CAA 90 bp | GGCATAGCTTTACTACATGCCTGTGGCTCAAGGTCCCTCATGAGATaGTTTTCAAGCTTATGGCTGGGGCTGTGGTCTCATCTGAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GIALLHACGSRSLMR*FSSLWLGLWSHLKV Trigger: AACCTTCAGATGAGACCACAGCCCCAGCCATAAGCTTGAAAACAATCTCATGAGGGACCTTGAGCCACAGGCATGTAGTAAAGCTATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS CAA 90 bp | CCTCAGTTTCTTGAAGTCTGTTGCCTGGATGCCACCCTCAGTTCCTaGCCACATATGGCTCTCCATAAACTCAAAACACAGCCATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PQFLEVCCLDATLSS*PHMALHKLKTQPLA Trigger: TGCCAATGGCTGTGTTTTGAGTTTATGGAGAGCCATATGTGGCAAGGAACTGAGGGTGGCATCCAGGCAACAGACTTCAAGAAACTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655423.1 ENST00000665952.1 |
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| CDS CAA 72 bp | GAGGGTAGTTTGAAAGCCACAGGTCTACCGTTTCTGTaGGTCAGCATAATCACAGGGGCCCTGGATTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: EGSLKATGLPFL*VSIITGALDFS Trigger: AGAAAAATCCAGGGCCCCTGTGATTATGCTGACCAACAGAAACGGTAGACCTGTGGCTTTCAAACTACCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660501.1 |
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| CDS TCA 72 bp | ACAACAGAAGTAGAAATTCTCCGGGTGGGTTACTTCTaGGGTACTGGATCCTGTTATCCCGGCCTTCCAATA | + |
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Preference number: 6 (lower is better) Translates to: TTEVEILRVGYF*GTGSCYPGLPI Trigger: TATTGGAAGGCCGGGATAACAGGATCCAGTACCTCAGAAGTAACCCACCCGGAGAATTTCTACTTCTGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660501.1 |
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| CDS GCA 72 bp | TTGAACCATACTGTGCCACCGAACTGCAGGAAATGCTaGCCTTGTTGTTTTTCACTGGTCATATTGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: LNHTVPPNCRKC*PCCFSLVILPH Trigger: GTGTGGCAATATGACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTATGGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS CCA 72 bp | AGGCAGGATTCCTGGCATAGCTTTACTACATGCCTGTaGCTCAAGGTCCCTCATGAGATTGTTTTCAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RQDSWHSFTTCL*LKVPHEIVFKL Trigger: AAGCTTGAAAACAATCTCATGAGGGACCTTGAGCCACAGGCATGTAGTAAAGCTATGCCAGGAATCCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS CCA 72 bp | ATACTTTATGGACACATGGCTATTGCAAAGAGCCAGTaGATGTCCTCCCACCTACAATGCTGGTACAACCTC | + |
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Preference number: 6 (lower is better) Translates to: ILYGHMAIAKSQ*MSSHLQCWYNL Trigger: GAGGTTGTACCAGCATTGTAGGTGGGAGGACATCCACTGGCTCTTTGCAATAGCCATGTGTCCATAAAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548087.5 |
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| CDS CAA 72 bp | TACTGTGCCACCGAACTGCAGGAAATGCTGCCCTTGTaGTTTTTCACTGGTCATATTGCCACACCTAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: YCATELQEMLPL*FFTGHIATPSK Trigger: TTTGCTAGGTGTGGCAATATGACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS CAA 90 bp | CTCTTTGAACCATACTGTGCCACCGAACTGCAGGAAATGCTGCCCTaGTTGTTTTTCACTGGTCATATTGCCACACCTAGCAAATTAGAC | + |
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Preference number: 6 (lower is better) Translates to: LFEPYCATELQEMLP*LFFTGHIATPSKLD Trigger: GTCTAATTTGCTAGGTGTGGCAATATGACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTATGGTTCAAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS CAA 90 bp | GGCAATGAGATTGCTGAGAAACTATACTTTATGGACACATGGCTATaGCAAAGAGCCAGTGGATGTCCTCCCACCTACAATGCTGGTACA | + |
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Preference number: 6 (lower is better) Translates to: GNEIAEKLYFMDTWL*QRASGCPPTYNAGT Trigger: TGTACCAGCATTGTAGGTGGGAGGACATCCACTGGCTCTTTGCAATAGCCATGTGTCCATAAAGTATAGTTTCTCAGCAATCTCATTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548087.5 |
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| CDS TCA 72 bp | TTGTTGGTCAGATTCAGTTCTTGTGGGTTGTTGGACTaGCAGCCTCAGTTTCTTGAAGTCTGTTGCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LLVRFSSCGLLD*QPQFLEVCCLD Trigger: ATCCAGGCAACAGACTTCAAGAAACTGAGGCTGTCAGTCCAACAACCCACAAGAACTGAATCTGACCAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS GCA 72 bp | TCTTTGAACCATACTGTGCCACCGAACTGCAGGAAATaGTGCCCTTGTTGTTTTTCACTGGTCATATTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLNHTVPPNCRK*CPCCFSLVILP Trigger: TGGCAATATGACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTATGGTTCAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS CCA 72 bp | TGTGATTGTTGGTCAGATTCAGTTCTTGTGGGTTGTTaGACTGACAGCCTCAGTTTCTTGAAGTCTGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: CDCWSDSVLVGC*TDSLSFLKSVA Trigger: GGCAACAGACTTCAAGAAACTGAGGCTGTCAGTCCAACAACCCACAAGAACTGAATCTGACCAACAATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS CCA 72 bp | CATCCTGCTGATTGGTCCATTTTACAGAGCGCTGACTaGTCCATTTTACAGAGTGCTGATTGGTGCGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: HPADWSILQSAD*SILQSADWCVF Trigger: AAAAACGCACCAATCAGCACTCTGTAAAATGGACCAGTCAGCGCTCTGTAAAATGGACCAATCAGCAGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS CAA 72 bp | TGGACAAACAGAAGAATAGTGGGAGTTCTGGTGGATTaGTGCTCACTGTCCACACCACCATCAATACTAAGC | + |
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Preference number: 6 (lower is better) Translates to: WTNRRIVGVLVD*CSLSTPPSILS Trigger: GCTTAGTATTGATGGTGGTGTGGACAGTGAGCACAAATCCACCAGAACTCCCACTATTCTTCTGTTTGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660501.1 |
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| CDS CAA 90 bp | GTCAGGAAATGGACAAACAGAAGAATAGTGGGAGTTCTGGTGGATTaGTGCTCACTGTCCACACCACCATCAATACTAAGCTTTCCTACA | + |
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Preference number: 6 (lower is better) Translates to: VRKWTNRRIVGVLVD*CSLSTPPSILSFPT Trigger: TGTAGGAAAGCTTAGTATTGATGGTGGTGTGGACAGTGAGCACAAATCCACCAGAACTCCCACTATTCTTCTGTTTGTCCATTTCCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660501.1 |
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| CDS GCA 72 bp | ACGCTGATTGATGCGTTTTTACAGAGTGCTGATTGGTaGATCTACAAACCTTTAGCTAGACACAGAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: TLIDAFLQSADW*IYKPLARHRAL Trigger: CAGTGCTCTGTGTCTAGCTAAAGGTTTGTAGATGCACCAATCAGCACTCTGTAAAAACGCATCAATCAGCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS GCA 72 bp | TTTTATACCTCTTTGAACCATACTGTGCCACCGAACTaGAGGAAATGCTGCCCTTGTTGTTTTTCACTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FYTSLNHTVPPN*RKCCPCCFSLV Trigger: GACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTATGGTTCAAAGAGGTATAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS GCA 72 bp | TTGCTGAGAAACTATACTTTATGGACACATGGCTATTaGAAAGAGCCAGTGGATGTCCTCCCACCTACAATG | + |
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Preference number: 6 (lower is better) Translates to: LLRNYTLWTHGY*KEPVDVLPPTM Trigger: CATTGTAGGTGGGAGGACATCCACTGGCTCTTTGCAATAGCCATGTGTCCATAAAGTATAGTTTCTCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548087.5 |
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| CDS CCA 72 bp | CTCATGAGATTGTTTTCAAGCTTATGGCTGGGGCTGTaGTCTCATCTGAAGGTTTGTCTGGGAAAGAGTATA | + |
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Preference number: 6 (lower is better) Translates to: LMRLFSSLWLGL*SHLKVCLGKSI Trigger: TATACTCTTTCCCAGACAAACCTTCAGATGAGACCACAGCCCCAGCCATAAGCTTGAAAACAATCTCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS CCA 72 bp | AATGAGATTGCTGAGAAACTATACTTTATGGACACATaGCTATTGCAAAGAGCCAGTGGATGTCCTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: NEIAEKLYFMDT*LLQRASGCPPT Trigger: GGTGGGAGGACATCCACTGGCTCTTTGCAATAGCCATGTGTCCATAAAGTATAGTTTCTCAGCAATCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548087.5 |
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| CDS CCA 72 bp | GACTGGGCAATGAGATTGCTGAGAAACTATACTTTATaGACACATGGCTATTGCAAAGAGCCAGTGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: DWAMRLLRNYTL*THGYCKEPVDV Trigger: GACATCCACTGGCTCTTTGCAATAGCCATGTGTCCATAAAGTATAGTTTCTCAGCAATCTCATTGCCCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548087.5 |
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| CDS CCA 72 bp | AGTAGAAATTCTCCGGGTGGGTTACTTCTGAGGTACTaGATCCTGTTATCCCGGCCTTCCAATAAATTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SRNSPGGLLLRY*ILLSRPSNKFV Trigger: TACAAATTTATTGGAAGGCCGGGATAACAGGATCCAGTACCTCAGAAGTAACCCACCCGGAGAATTTCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660501.1 |
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| CDS CAA 90 bp | TTTGAACCATACTGTGCCACCGAACTGCAGGAAATGCTGCCCTTGTaGTTTTTCACTGGTCATATTGCCACACCTAGCAAATTAGACTTA | + |
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Preference number: 6 (lower is better) Translates to: FEPYCATELQEMLPL*FFTGHIATPSKLDL Trigger: TAAGTCTAATTTGCTAGGTGTGGCAATATGACCAGTGAAAAACAACAAGGGCAGCATTTCCTGCAGTTCGGTGGCACAGTATGGTTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000551588.6 ENST00000655423.1 ENST00000664085.1 ENST00000667065.1 |
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| CDS GCA 72 bp | GACACAGAATTTTTACAGAGTGCTGATTGGTGCATTTaGGATCCTTTAGCTAGACACAGAGCACTGATTGGT | + |
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Preference number: 6 (lower is better) Translates to: DTEFLQSADWCI*DPLARHRALIG Trigger: ACCAATCAGTGCTCTGTGTCTAGCTAAAGGATCGCAAATGCACCAATCAGCACTCTGTAAAAATTCTGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS GCA 72 bp | AGTCTGGGTGACGGAGTGAGACATATTGTATTTTGCTaGATATTTATGTGCCCAGAATTGGTTCCTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SLGDGVRHIVFC*IFMCPELVPSS Trigger: ACTGGAAGGAACCAATTCTGGGCACATAAATATGCAGCAAAATACAATATGTCTCACTCCGTCACCCAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660700.1 |
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| CDS GCA 72 bp | ACAAACAGAAGAATAGTGGGAGTTCTGGTGGATTTGTaGTCACTGTCCACACCACCATCAATACTAAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: TNRRIVGVLVDL*SLSTPPSILSF Trigger: AAAGCTTAGTATTGATGGTGGTGTGGACAGTGAGCACAAATCCACCAGAACTCCCACTATTCTTCTGTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660501.1 |
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| CDS CCA 72 bp | AGAACGCTGATTGATGCGTTTTTACAGAGTGCTGATTaGTGCATCTACAAACCTTTAGCTAGACACAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: RTLIDAFLQSAD*CIYKPLARHRA Trigger: TGCTCTGTGTCTAGCTAAAGGTTTGTAGATGCACCAATCAGCACTCTGTAAAAACGCATCAATCAGCGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS CCA 72 bp | CTGCATATTTATGTGCCCAGAATTGGTTCCTTCCAGTaGGTTCTTGGTCTCACTGACTTTAAGAATGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LHIYVPRIGSFQ*VLGLTDFKNEV Trigger: GACTTCATTCTTAAAGTCAGTGAGACCAAGAACCCACTGGAAGGAACCAATTCTGGGCACATAAATATGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660700.1 |
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| CDS CAA 72 bp | ATTGCTGAGAAACTATACTTTATGGACACATGGCTATaGCAAAGAGCCAGTGGATGTCCTCCCACCTACAAT | + |
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Preference number: 6 (lower is better) Translates to: IAEKLYFMDTWL*QRASGCPPTYN Trigger: ATTGTAGGTGGGAGGACATCCACTGGCTCTTTGCAATAGCCATGTGTCCATAAAGTATAGTTTCTCAGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548087.5 |
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| CDS CAA 72 bp | CTGAATATTGAAAGGCCTCCAGGCATCCATTTTTGCTaGTGCCAATATAACAGATGTAATGTGGCTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LNIERPPGIHFC*CQYNRCNVALE Trigger: CTCCAGAGCCACATTACATCTGTTATATTGGCACAAGCAAAAATGGATGCCTGGAGGCCTTTCAATATTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660501.1 |
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| CDS CAA 90 bp | ATTGTTTTCAAGCTTATGGCTGGGGCTGTGGTCTCATCTGAAGGTTaGTCTGGGAAAGAGTATACTTCTAAGTTTGTTCCTGTGATTGTT | + |
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Preference number: 6 (lower is better) Translates to: IVFKLMAGAVVSSEG*SGKEYTSKFVPVIV Trigger: AACAATCACAGGAACAAACTTAGAAGTATACTCTTTCCCAGACAAACCTTCAGATGAGACCACAGCCCCAGCCATAAGCTTGAAAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS CAA 90 bp | GGAGTGAGACATATTGTATTTTGCTGCATATTTATGTGCCCAGAATaGGTTCCTTCCAGTGGGTTCTTGGTCTCACTGACTTTAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: GVRHIVFCCIFMCPE*VPSSGFLVSLTLRM Trigger: CATTCTTAAAGTCAGTGAGACCAAGAACCCACTGGAAGGAACCAATTCTGGGCACATAAATATGCAGCAAAATACAATATGTCTCACTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660700.1 |
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| CDS CAA 90 bp | AGTTCCTTGCCACATATGGCTCTCCATAAACTCAAAACACAGCCATaGGCTTTCCATGTGATGTATTGGTTCTATTTCAGATATGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSLPHMALHKLKTQP*AFHVMYWFYFRYAE Trigger: TTCTGCATATCTGAAATAGAACCAATACATCACATGGAAAGCCAATGGCTGTGTTTTGAGTTTATGGAGAGCCATATGTGGCAAGGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550990.1 ENST00000658814.1 |
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| CDS TCA 72 bp | TGTCTGGGAAAGAGTATACTTCTAAGTTTGTTCCTGTaGTTGTTGGTCAGATTCAGTTCTTGTGGGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: CLGKSILLSLFL*LLVRFSSCGLL Trigger: CAACAACCCACAAGAACTGAATCTGACCAACAATCACAGGAACAAACTTAGAAGTATACTCTTTCCCAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000550990.1 ENST00000551588.6 ENST00000655423.1 ENST00000656401.1 ENST00000657083.1 ENST00000657147.1 ENST00000658814.1 ENST00000660700.1 ENST00000665952.1 ENST00000671154.1 |
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| CDS GCA 72 bp | TTTCTGAATATTGAAAGGCCTCCAGGCATCCATTTTTaGTTGTGCCAATATAACAGATGTAATGTGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FLNIERPPGIHF*LCQYNRCNVAL Trigger: CAGAGCCACATTACATCTGTTATATTGGCACAAGCAAAAATGGATGCCTGGAGGCCTTTCAATATTCAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660501.1 |
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| CDS CCA 72 bp | GAAATGAAGACAAAGAGATTCCAAAACTGTGTGAGGTaGTGTTTGGAGAATTCAGGACTCAGGTGCTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: EMKTKRFQNCVR*CLENSGLRCFY Trigger: ATAAAAGCACCTGAGTCCTGAATTCTCCAAACACCACCTCACACAGTTTTGGAATCTCTTTGTCTTCATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670211.1 |
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| CDS CAA 72 bp | CCACATATGGCTCTCCATAAACTCAAAACACAGCCATaGGCTTTCCATGTGATGTATTGGTTCTATTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PHMALHKLKTQP*AFHVMYWFYFR Trigger: TCTGAAATAGAACCAATACATCACATGGAAAGCCAATGGCTGTGTTTTGAGTTTATGGAGAGCCATATGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550990.1 ENST00000658814.1 |
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| CDS CAA 90 bp | TGCCATGTGGTAAAAAGTTTGGCTTTACTCCCTTGCCATATGCCTTaGCAAACAGGAAAAACATACACGTTATGTAAATCACGGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: CHVVKSLALLPCHMP*QTGKTYTLCKSRIK Trigger: TTTGATCCGTGATTTACATAACGTGTATGTTTTTCCTGTTTGCAAAGGCATATGGCAAGGGAGTAAAGCCAAACTTTTTACCACATGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000548775.2 |
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| CDS GCA 72 bp | GAAATCTCCATTACAATACATTGCCTCCTGTATGAATaGTCTGCATTTCCAGCTGTCTTCACTGTATTAACT | + |
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Preference number: 6 (lower is better) Translates to: EISITIHCLLYE*SAFPAVFTVLT Trigger: AGTTAATACAGTGAAGACAGCTGGAAATGCAGAGCATTCATACAGGAGGCAATGTATTGTAATGGAGATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657120.1 ENST00000664085.1 |
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| CDS CCA 72 bp | CTCAAAACACAGCCATTGGCTTTCCATGTGATGTATTaGTTCTATTTCAGATATGCAGAAACTTGCAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: LKTQPLAFHVMY*FYFRYAETCKN Trigger: GTTTTTGCAAGTTTCTGCATATCTGAAATAGAACCAATACATCACATGGAAAGCCAATGGCTGTGTTTTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000550990.1 ENST00000658814.1 |
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