Pregenerated sensors for LINC02322 (Homo sapiens)
Ensembl gene IDs: ENSG00000258556Ensembl transcript IDs: ENST00000554773.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGCTGCTGAGGGGCTGCATTAGGCCGATTCAATGGCCAAGAGCATaGCAGGAGCCGAATTGCACGGCCAGCAAGGGCGGGCTCATCACA | + |
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Preference number: 5 (lower is better) Translates to: WLLRGCIRPIQWPRA*QEPNCTASKGGLIT Trigger: TGTGATGAGCCCGCCCTTGCTGGCCGTGCAATTCGGCTCCTGTCATGCTCTTGGCCATTGAATCGGCCTAATGCAGCCCCTCAGCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS GCA 90 bp | GCCAGGTCCGTGGTTCACATGCTCTTCCGTGAGGACAGCCAGGACTaGCAAGGCAGCAACCTAAACCGCAGTTTGCCAGTGGCAAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: ARSVVHMLFREDSQD*QGSNLNRSLPVARV Trigger: CACCCTTGCCACTGGCAAACTGCGGTTTAGGTTGCTGCCTTGGCAGTCCTGGCTGTCCTCACGGAAGAGCATGTGAACCACGGACCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS GCA 90 bp | GCCGAATTGCACGGCCAGCAAGGGCGGGCTCATCACATGCTCATCTaGCAGCCTGCACCGCAGAGCCAACCCAATGAAAAAGACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AELHGQQGRAHHMLI*QPAPQSQPNEKDSQ Trigger: CTGGCTGTCTTTTTCATTGGGTTGGCTCTGCGGTGCAGGCTGGCAGATGAGCATGTGATGAGCCCGCCCTTGCTGGCCGTGCAATTCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS CCA 90 bp | CATGCCCTGCTGACATTAGATCCTCAGCCCCAGGGAACACCAGGCTaGCTGCTGAGGGGCTGCATTAGGCCGATTCAATGGCCAAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: HALLTLDPQPQGTPG*LLRGCIRPIQWPRA Trigger: TGCTCTTGGCCATTGAATCGGCCTAATGCAGCCCCTCAGCAGCCAGCCTGGTGTTCCCTGGGGCTGAGGATCTAATGTCAGCAGGGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS TCA 90 bp | CCCAATGAAAAAGACAGCCAGGTCCGTGGTTCACATGCTCTTCCGTaGGGACAGCCAGGACTGCCAAGGCAGCAACCTAAACCGCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: PNEKDSQVRGSHALP*GQPGLPRQQPKPQF Trigger: AAACTGCGGTTTAGGTTGCTGCCTTGGCAGTCCTGGCTGTCCTCACGGAAGAGCATGTGAACCACGGACCTGGCTGTCTTTTTCATTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS GCA 72 bp | CCGAATTGCACGGCCAGCAAGGGCGGGCTCATCACATaGTCATCTGCCAGCCTGCACCGCAGAGCCAACCCA | + |
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Preference number: 6 (lower is better) Translates to: PNCTASKGGLIT*SSASLHRRANP Trigger: TGGGTTGGCTCTGCGGTGCAGGCTGGCAGATGAGCATGTGATGAGCCCGCCCTTGCTGGCCGTGCAATTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS TCA 72 bp | AGGGGCTGCATTAGGCCGATTCAATGGCCAAGAGCATaGCAGGAGCCGAATTGCACGGCCAGCAAGGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: RGCIRPIQWPRA*QEPNCTASKGG Trigger: CCCGCCCTTGCTGGCCGTGCAATTCGGCTCCTGTCATGCTCTTGGCCATTGAATCGGCCTAATGCAGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS GCA 72 bp | CACGGCCAGCAAGGGCGGGCTCATCACATGCTCATCTaGCAGCCTGCACCGCAGAGCCAACCCAATGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: HGQQGRAHHMLI*QPAPQSQPNEK Trigger: TTTTTCATTGGGTTGGCTCTGCGGTGCAGGCTGGCAGATGAGCATGTGATGAGCCCGCCCTTGCTGGCCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS CAA 72 bp | GCCGATTCAATGGCCAAGAGCATGACAGGAGCCGAATaGCACGGCCAGCAAGGGCGGGCTCATCACATGCTC | + |
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Preference number: 6 (lower is better) Translates to: ADSMAKSMTGAE*HGQQGRAHHML Trigger: GAGCATGTGATGAGCCCGCCCTTGCTGGCCGTGCAATTCGGCTCCTGTCATGCTCTTGGCCATTGAATCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS GCA 72 bp | GTGGTTCACATGCTCTTCCGTGAGGACAGCCAGGACTaGCAAGGCAGCAACCTAAACCGCAGTTTGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VVHMLFREDSQD*QGSNLNRSLPV Trigger: CACTGGCAAACTGCGGTTTAGGTTGCTGCCTTGGCAGTCCTGGCTGTCCTCACGGAAGAGCATGTGAACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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| CDS TCA 72 bp | AAAGACAGCCAGGTCCGTGGTTCACATGCTCTTCCGTaGGGACAGCCAGGACTGCCAAGGCAGCAACCTAAA | + |
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Preference number: 6 (lower is better) Translates to: KDSQVRGSHALP*GQPGLPRQQPK Trigger: TTTAGGTTGCTGCCTTGGCAGTCCTGGCTGTCCTCACGGAAGAGCATGTGAACCACGGACCTGGCTGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554773.1 |
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