Pregenerated sensors for LINC02321 (Homo sapiens)
Ensembl gene IDs: ENSG00000258884Ensembl transcript IDs: ENST00000555975.1, ENST00000659138.1, ENST00000671606.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCAGACCTGGGGAAGAACTCAACCTGCCTTCAGCCCATGGGGACTaGGGCCGGCGCGGCTTTCTGGAATCGAACGGAACGAGGCGACCA | + |
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Preference number: 5 (lower is better) Translates to: RRPGEELNLPSAHGD*GRRGFLESNGTRRP Trigger: TGGTCGCCTCGTTCCGTTCGATTCCAGAAAGCCGCGCCGGCCCCAGTCCCCATGGGCTGAAGGCAGGTTGAGTTCTTCCCCAGGTCTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS CCA 90 bp | CGAGGCTCGCAGACCTGGGGAAGAACTCAACCTGCCTTCAGCCCATaGGGACTGGGGCCGGCGCGGCTTTCTGGAATCGAACGGAACGAG | + |
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Preference number: 5 (lower is better) Translates to: RGSQTWGRTQPAFSP*GLGPARLSGIERNE Trigger: CTCGTTCCGTTCGATTCCAGAAAGCCGCGCCGGCCCCAGTCCCCATGGGCTGAAGGCAGGTTGAGTTCTTCCCCAGGTCTGCGAGCCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS GCA 90 bp | TCTGCAGCCGGACCCAGAGGAACGCCAGGAATTAACTGTGGTGGGTaGTCCAGTAAGTCTTCCTGGAGAATGTTGCCCCCAAGCCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: SAAGPRGTPGINCGG*SSKSSWRMLPPSQA Trigger: GGCTTGGCTTGGGGGCAACATTCTCCAGGAAGACTTACTGGAGCACCCACCACAGTTAATTCCTGGCGTTCCTCTGGGTCCGGCTGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS CCA 90 bp | TCAGTCTGTTGCAGGAAGTCAGGGACCTCGAATGGAGGGACCGGCTaGAGCTGTCAAAGGGTCAGCGAGAAAACCAGTCCCTTGGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SVCCRKSGTSNGGTG*SCQRVSEKTSPLAG Trigger: ACCAGCCAAGGGACTGGTTTTCTCGCTGACCCTTTGACAGCTCCAGCCGGTCCCTCCATTCGAGGTCCCTGACTTCCTGCAACAGACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS CCA 90 bp | GGCTGTAGGCTCATTCCAAAGGCCAGTGCAAATAGGGGGCTTGTGTaGTCTGGAGACCTCCCAGTCCTCATCTCCGAAAGCCTGGATTCC | + |
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Preference number: 5 (lower is better) Translates to: GCRLIPKASANRGLV*SGDLPVLISESLDS Trigger: GGAATCCAGGCTTTCGGAGATGAGGACTGGGAGGTCTCCAGACCACACAAGCCCCCTATTTGCACTGGCCTTTGGAATGAGCCTACAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS CCA 90 bp | GGTGGGCACGGATTCAGAACGAGAGAGGGGAAGGTATCAAGAAGGTaGTCGTCAGCCCTGGAAAAGCTCAGAAGGCCATCTCAGTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: GGHGFRTREGKVSRR*SSALEKLRRPSQSV Trigger: AACAGACTGAGATGGCCTTCTGAGCTTTTCCAGGGCTGACGACCACCTTCTTGATACCTTCCCCTCTCTCGTTCTGAATCCGTGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS TCA 90 bp | TTCTTTGTCAGAAAGCAGCCTTGCGCTTCTAAGGGGTCTGCTGTCTaGAAGAAGCCTTCGAGGCTCGCAGACCTGGGGAAGAACTCAACC | + |
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Preference number: 5 (lower is better) Translates to: FFVRKQPCASKGSAV*KKPSRLADLGKNST Trigger: GGTTGAGTTCTTCCCCAGGTCTGCGAGCCTCGAAGGCTTCTTTCAGACAGCAGACCCCTTAGAAGCGCAAGGCTGCTTTCTGACAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000659138.1 ENST00000671606.1 |
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| CDS TCA 90 bp | GTCCATCTACTGCGAAGCAAGAGAAAACTCCACGGAATACACGACTaGAACGAGTGGGAAGCCAGATGTGTCACGGACGTAGGGAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: VHLLRSKRKLHGIHD*NEWEARCVTDVGRG Trigger: TCCCCTCCCTACGTCCGTGACACATCTGGCTTCCCACTCGTTTCAGTCGTGTATTCCGTGGAGTTTTCTCTTGCTTCGCAGTAGATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS CCA 90 bp | TCAGAACGAGAGAGGGGAAGGTATCAAGAAGGTGGTCGTCAGCCCTaGAAAAGCTCAGAAGGCCATCTCAGTCTGTTGCAGGAAGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SERERGRYQEGGRQP*KSSEGHLSLLQEVR Trigger: CCTGACTTCCTGCAACAGACTGAGATGGCCTTCTGAGCTTTTCCAGGGCTGACGACCACCTTCTTGATACCTTCCCCTCTCTCGTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS CCA 90 bp | CGGCTGGAGCTGTCAAAGGGTCAGCGAGAAAACCAGTCCCTTGGCTaGTTGAAAGGAACACTTGATTCTTTGTCAGAAAGCAGCCTTGCG | + |
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Preference number: 5 (lower is better) Translates to: RLELSKGQRENQSLG*LKGTLDSLSESSLA Trigger: CGCAAGGCTGCTTTCTGACAAAGAATCAAGTGTTCCTTTCAACCAGCCAAGGGACTGGTTTTCTCGCTGACCCTTTGACAGCTCCAGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS CCA 90 bp | GGAACGCCAGGAATTAACTGTGGTGGGTGCTCCAGTAAGTCTTCCTaGAGAATGTTGCCCCCAAGCCAAGCCTTGAAAAAGGATCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: GTPGINCGGCSSKSS*RMLPPSQALKKDLR Trigger: CCTGAGATCCTTTTTCAAGGCTTGGCTTGGGGGCAACATTCTCCAGGAAGACTTACTGGAGCACCCACCACAGTTAATTCCTGGCGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS TCA 90 bp | GGGTCAGCGAGAAAACCAGTCCCTTGGCTGGTTGAAAGGAACACTTaGTTCTTTGTCAGAAAGCAGCCTTGCGCTTCTAAGGGGTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GSARKPVPWLVERNT*FFVRKQPCASKGSA Trigger: AGCAGACCCCTTAGAAGCGCAAGGCTGCTTTCTGACAAAGAATCAAGTGTTCCTTTCAACCAGCCAAGGGACTGGTTTTCTCGCTGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000555975.1 ENST00000659138.1 ENST00000671606.1 |
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| CDS TCA 90 bp | TGGAGCTGTCAAAGGGTCAGCGAGAAAACCAGTCCCTTGGCTGGTTaGAAGGAACACTTGATTCTTTGTCAGAAAGCAGCCTTGCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: WSCQRVSEKTSPLAG*KEHLILCQKAALRF Trigger: GAAGCGCAAGGCTGCTTTCTGACAAAGAATCAAGTGTTCCTTTCAACCAGCCAAGGGACTGGTTTTCTCGCTGACCCTTTGACAGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS GCA 90 bp | AGCACTTGGTGGTCAGAAGGGTTGGGGGTGAAGGTTTATGGGATCTaGTGGACAGCTGGTGAGGCATACAGACACTTCTGGTTATTATCT | + |
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Preference number: 5 (lower is better) Translates to: STWWSEGLGVKVYGI*WTAGEAYRHFWLLS Trigger: AGATAATAACCAGAAGTGTCTGTATGCCTCACCAGCTGTCCAGCAGATCCCATAAACCTTCACCCCCAACCCTTCTGACCACCAAGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS TCA 90 bp | CATACCTGTCAAAGGGTCAGCGAGAAAACCAGTCCCTTGGCTGGTTaGAAGGAACACTTGATTCTTTGTCAGAAAGCAGCCTTGCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HTCQRVSEKTSPLAG*KEHLILCQKAALRF Trigger: GAAGCGCAAGGCTGCTTTCTGACAAAGAATCAAGTGTTCCTTTCAACCAGCCAAGGGACTGGTTTTCTCGCTGACCCTTTGACAGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS TCA 90 bp | CAGTATTCAGACATATGCAGTCCCAGATCACCCCCGACCATCAGATaGGAAAAACCCAACAATCTGGTCTCCTTTCCTGCAGCAAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: QYSDICSPRSPPTIR*EKPNNLVSFPAAKH Trigger: GTGCTTTGCTGCAGGAAAGGAGACCAGATTGTTGGGTTTTTCTCATCTGATGGTCGGGGGTGATCTGGGACTGCATATGTCTGAATACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS CCA 90 bp | GGAACATACCTGTCAAAGGGTCAGCGAGAAAACCAGTCCCTTGGCTaGTTGAAAGGAACACTTGATTCTTTGTCAGAAAGCAGCCTTGCG | + |
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Preference number: 5 (lower is better) Translates to: GTYLSKGQRENQSLG*LKGTLDSLSESSLA Trigger: CGCAAGGCTGCTTTCTGACAAAGAATCAAGTGTTCCTTTCAACCAGCCAAGGGACTGGTTTTCTCGCTGACCCTTTGACAGGTATGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS CCA 90 bp | ACTTGGTGGTCAGAAGGGTTGGGGGTGAAGGTTTATGGGATCTGCTaGACAGCTGGTGAGGCATACAGACACTTCTGGTTATTATCTTTC | + |
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Preference number: 5 (lower is better) Translates to: TWWSEGLGVKVYGIC*TAGEAYRHFWLLSF Trigger: GAAAGATAATAACCAGAAGTGTCTGTATGCCTCACCAGCTGTCCAGCAGATCCCATAAACCTTCACCCCCAACCCTTCTGACCACCAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS TCA 90 bp | AGAAGGGTTGGGGGTGAAGGTTTATGGGATCTGCTGGACAGCTGGTaGGGCATACAGACACTTCTGGTTATTATCTTTCTCCCAAATCAA | + |
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Preference number: 5 (lower is better) Translates to: RRVGGEGLWDLLDSW*GIQTLLVIIFLPNQ Trigger: TTGATTTGGGAGAAAGATAATAACCAGAAGTGTCTGTATGCCTCACCAGCTGTCCAGCAGATCCCATAAACCTTCACCCCCAACCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS GCA 90 bp | TCACTGGCATTTAACAGTAAGGTGGGGCTTCAGAAGTCCATCTACTaGGAAGCAAGAGAAAACTCCACGGAATACACGACTGAAACGAGT | + |
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Preference number: 5 (lower is better) Translates to: SLAFNSKVGLQKSIY*EARENSTEYTTETS Trigger: ACTCGTTTCAGTCGTGTATTCCGTGGAGTTTTCTCTTGCTTCGCAGTAGATGGACTTCTGAAGCCCCACCTTACTGTTAAATGCCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS TCA 90 bp | ATTAAGGCAGTATCTTTTCCTCTAGGCATTCAGGTAGTACAGGTTTaGCAAGGATGTGGAAAATCACAGCCTATAGGCCCAATCCCACCA | + |
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Preference number: 5 (lower is better) Translates to: IKAVSFPLGIQVVQV*QGCGKSQPIGPIPP Trigger: TGGTGGGATTGGGCCTATAGGCTGTGATTTTCCACATCCTTGTCAAACCTGTACTACCTGAATGCCTAGAGGAAAAGATACTGCCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS CCA 72 bp | GGGGAAGAACTCAACCTGCCTTCAGCCCATGGGGACTaGGGCCGGCGCGGCTTTCTGGAATCGAACGGAACG | + |
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Preference number: 6 (lower is better) Translates to: GEELNLPSAHGD*GRRGFLESNGT Trigger: CGTTCCGTTCGATTCCAGAAAGCCGCGCCGGCCCCAGTCCCCATGGGCTGAAGGCAGGTTGAGTTCTTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS CCA 72 bp | CAGACCTGGGGAAGAACTCAACCTGCCTTCAGCCCATaGGGACTGGGGCCGGCGCGGCTTTCTGGAATCGAA | + |
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Preference number: 6 (lower is better) Translates to: QTWGRTQPAFSP*GLGPARLSGIE Trigger: TTCGATTCCAGAAAGCCGCGCCGGCCCCAGTCCCCATGGGCTGAAGGCAGGTTGAGTTCTTCCCCAGGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS CAA 90 bp | GGTGGTCGTCAGCCCTGGAAAAGCTCAGAAGGCCATCTCAGTCTGTaGCAGGAAGTCAGGGACCTCGAATGGAGGGACCGGCTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GGRQPWKSSEGHLSL*QEVRDLEWRDRLEL Trigger: CAGCTCCAGCCGGTCCCTCCATTCGAGGTCCCTGACTTCCTGCAACAGACTGAGATGGCCTTCTGAGCTTTTCCAGGGCTGACGACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS CCA 72 bp | TGCAGGAAGTCAGGGACCTCGAATGGAGGGACCGGCTaGAGCTGTCAAAGGGTCAGCGAGAAAACCAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CRKSGTSNGGTG*SCQRVSEKTSP Trigger: GGGACTGGTTTTCTCGCTGACCCTTTGACAGCTCCAGCCGGTCCCTCCATTCGAGGTCCCTGACTTCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS CAA 90 bp | AGGCAGGCTGTAGGCTCATTCCAAAGGCCAGTGCAAATAGGGGGCTaGTGTGGTCTGGAGACCTCCCAGTCCTCATCTCCGAAAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RQAVGSFQRPVQIGG*CGLETSQSSSPKAW Trigger: CCAGGCTTTCGGAGATGAGGACTGGGAGGTCTCCAGACCACACAAGCCCCCTATTTGCACTGGCCTTTGGAATGAGCCTACAGCCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS CCA 72 bp | CATCTCAGTCTGTTGCAGGAAGTCAGGGACCTCGAATaGAGGGACCGGCTGGAGCTGTCAAAGGGTCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: HLSLLQEVRDLE*RDRLELSKGQR Trigger: TCGCTGACCCTTTGACAGCTCCAGCCGGTCCCTCCATTCGAGGTCCCTGACTTCCTGCAACAGACTGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS CCA 72 bp | CTGCTGTCTGAAAGAAGCCTTCGAGGCTCGCAGACCTaGGGAAGAACTCAACCTGCCTTCAGCCCATGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LLSERSLRGSQT*GRTQPAFSPWG Trigger: TCCCCATGGGCTGAAGGCAGGTTGAGTTCTTCCCCAGGTCTGCGAGCCTCGAAGGCTTCTTTCAGACAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659138.1 ENST00000671606.1 |
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| CDS CAA 72 bp | CAGCCCTGGAAAAGCTCAGAAGGCCATCTCAGTCTGTaGCAGGAAGTCAGGGACCTCGAATGGAGGGACCGG | + |
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Preference number: 6 (lower is better) Translates to: QPWKSSEGHLSL*QEVRDLEWRDR Trigger: CCGGTCCCTCCATTCGAGGTCCCTGACTTCCTGCAACAGACTGAGATGGCCTTCTGAGCTTTTCCAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS TCA 72 bp | AGAAAGCAGCCTTGCGCTTCTAAGGGGTCTGCTGTCTaGAAGAAGCCTTCGAGGCTCGCAGACCTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RKQPCASKGSAV*KKPSRLADLGK Trigger: CTTCCCCAGGTCTGCGAGCCTCGAAGGCTTCTTTCAGACAGCAGACCCCTTAGAAGCGCAAGGCTGCTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000555975.1 ENST00000659138.1 ENST00000671606.1 |
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| CDS TCA 72 bp | CAGCTGGGAAAGGAGTCTGACTTCTGGCCAATTCCTTaGGAACAGCTGGGGTACCAGGAGGAGTGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QLGKESDFWPIP*EQLGYQEEWRQ Trigger: CTGCCTCCACTCCTCCTGGTACCCCAGCTGTTCTCAAGGAATTGGCCAGAAGTCAGACTCCTTTCCCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS CCA 72 bp | TGTGGAAAATCACAGCCTATAGGCCCAATCCCACCATaGGGCCTAGGGTGCCTGGCAGGAAAGAAGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: CGKSQPIGPIPP*GLGCLAGKKWR Trigger: CCTCCACTTCTTTCCTGCCAGGCACCCTAGGCCCCATGGTGGGATTGGGCCTATAGGCTGTGATTTTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS CCA 72 bp | CTGCCGTGTGACCTTGTGAAAGGCGTGTCCCCTCTCTaGGGGTGTCAGTGGACTAATTCCCGAGTTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LPCDLVKGVSPL*GCQWTNSRVSC Trigger: ACAGCTAACTCGGGAATTAGTCCACTGACACCCCCAGAGAGGGGACACGCCTTTCACAAGGTCACACGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS CAA 72 bp | GTAGGCTCATTCCAAAGGCCAGTGCAAATAGGGGGCTaGTGTGGTCTGGAGACCTCCCAGTCCTCATCTCCG | + |
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Preference number: 6 (lower is better) Translates to: VGSFQRPVQIGG*CGLETSQSSSP Trigger: CGGAGATGAGGACTGGGAGGTCTCCAGACCACACAAGCCCCCTATTTGCACTGGCCTTTGGAATGAGCCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS GCA 72 bp | GGACCCAGAGGAACGCCAGGAATTAACTGTGGTGGGTaGTCCAGTAAGTCTTCCTGGAGAATGTTGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GPRGTPGINCGG*SSKSSWRMLPP Trigger: TGGGGGCAACATTCTCCAGGAAGACTTACTGGAGCACCCACCACAGTTAATTCCTGGCGTTCCTCTGGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS CCA 72 bp | CTCATTCCAAAGGCCAGTGCAAATAGGGGGCTTGTGTaGTCTGGAGACCTCCCAGTCCTCATCTCCGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LIPKASANRGLV*SGDLPVLISES Trigger: GCTTTCGGAGATGAGGACTGGGAGGTCTCCAGACCACACAAGCCCCCTATTTGCACTGGCCTTTGGAATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS GCA 72 bp | TGGTCAGAAGGGTTGGGGGTGAAGGTTTATGGGATCTaGTGGACAGCTGGTGAGGCATACAGACACTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: WSEGLGVKVYGI*WTAGEAYRHFW Trigger: CCAGAAGTGTCTGTATGCCTCACCAGCTGTCCAGCAGATCCCATAAACCTTCACCCCCAACCCTTCTGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS CCA 72 bp | GAGAGGGGAAGGTATCAAGAAGGTGGTCGTCAGCCCTaGAAAAGCTCAGAAGGCCATCTCAGTCTGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: ERGRYQEGGRQP*KSSEGHLSLLQ Trigger: CTGCAACAGACTGAGATGGCCTTCTGAGCTTTTCCAGGGCTGACGACCACCTTCTTGATACCTTCCCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS CCA 72 bp | GGATTCAGAACGAGAGAGGGGAAGGTATCAAGAAGGTaGTCGTCAGCCCTGGAAAAGCTCAGAAGGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: GFRTREGKVSRR*SSALEKLRRPS Trigger: AGATGGCCTTCTGAGCTTTTCCAGGGCTGACGACCACCTTCTTGATACCTTCCCCTCTCTCGTTCTGAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555975.1 ENST00000659138.1 |
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| CDS CAA 90 bp | GGAATTAACTGTGGTGGGTGCTCCAGTAAGTCTTCCTGGAGAATGTaGCCCCCAAGCCAAGCCTTGAAAAAGGATCTCAGGTCCAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GINCGGCSSKSSWRM*PPSQALKKDLRSSL Trigger: CAGACTGGACCTGAGATCCTTTTTCAAGGCTTGGCTTGGGGGCAACATTCTCCAGGAAGACTTACTGGAGCACCCACCACAGTTAATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS TCA 72 bp | CTGCGAAGCAAGAGAAAACTCCACGGAATACACGACTaGAACGAGTGGGAAGCCAGATGTGTCACGGACGTA | + |
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Preference number: 6 (lower is better) Translates to: LRSKRKLHGIHD*NEWEARCVTDV Trigger: TACGTCCGTGACACATCTGGCTTCCCACTCGTTTCAGTCGTGTATTCCGTGGAGTTTTCTCTTGCTTCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS TCA 72 bp | GACATATGCAGTCCCAGATCACCCCCGACCATCAGATaGGAAAAACCCAACAATCTGGTCTCCTTTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: DICSPRSPPTIR*EKPNNLVSFPA Trigger: TGCAGGAAAGGAGACCAGATTGTTGGGTTTTTCTCATCTGATGGTCGGGGGTGATCTGGGACTGCATATGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS TCA 72 bp | CAAAGGGTCAGCGAGAAAACCAGTCCCTTGGCTGGTTaGAAGGAACACTTGATTCTTTGTCAGAAAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: QRVSEKTSPLAG*KEHLILCQKAA Trigger: GGCTGCTTTCTGACAAAGAATCAAGTGTTCCTTTCAACCAGCCAAGGGACTGGTTTTCTCGCTGACCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555975.1 ENST00000659138.1 ENST00000671606.1 |
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| CDS CCA 72 bp | CTGTCAAAGGGTCAGCGAGAAAACCAGTCCCTTGGCTaGTTGAAAGGAACACTTGATTCTTTGTCAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LSKGQRENQSLG*LKGTLDSLSES Trigger: GCTTTCTGACAAAGAATCAAGTGTTCCTTTCAACCAGCCAAGGGACTGGTTTTCTCGCTGACCCTTTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555975.1 ENST00000659138.1 ENST00000671606.1 |
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| CDS CCA 72 bp | TCTAGGCATTCAGGTAGTACAGGTTTGACAAGGATGTaGAAAATCACAGCCTATAGGCCCAATCCCACCATG | + |
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Preference number: 6 (lower is better) Translates to: SRHSGSTGLTRM*KITAYRPNPTM Trigger: CATGGTGGGATTGGGCCTATAGGCTGTGATTTTCCACATCCTTGTCAAACCTGTACTACCTGAATGCCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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| CDS TCA 72 bp | TCAAATGCTAAAGGTACTAAAACCATGCTGACTGCATaGACCATTCCCTGGGGACTGGTAGGGCATTCCATT | + |
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Preference number: 6 (lower is better) Translates to: SNAKGTKTMLTA*TIPWGLVGHSI Trigger: AATGGAATGCCCTACCAGTCCCCAGGGAATGGTTCATGCAGTCAGCATGGTTTTAGTACCTTTAGCATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS GCA 72 bp | TTTAACAGTAAGGTGGGGCTTCAGAAGTCCATCTACTaGGAAGCAAGAGAAAACTCCACGGAATACACGACT | + |
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Preference number: 6 (lower is better) Translates to: FNSKVGLQKSIY*EARENSTEYTT Trigger: AGTCGTGTATTCCGTGGAGTTTTCTCTTGCTTCGCAGTAGATGGACTTCTGAAGCCCCACCTTACTGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671606.1 |
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| CDS TCA 72 bp | GTATCTTTTCCTCTAGGCATTCAGGTAGTACAGGTTTaGCAAGGATGTGGAAAATCACAGCCTATAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VSFPLGIQVVQV*QGCGKSQPIGP Trigger: TGGGCCTATAGGCTGTGATTTTCCACATCCTTGTCAAACCTGTACTACCTGAATGCCTAGAGGAAAAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659138.1 |
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