Pregenerated sensors for LINC02320 (Homo sapiens)

Ensembl gene IDs: ENSG00000258404

Ensembl transcript IDs: ENST00000557778.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GCGCGGGGAGAAGAGAGCCCACGATGTTCCCAGCCCTTCTCCCAGTaGGATCATGAGTCATTTTATGTTCCAGCGTCTATGCTTCAACAC	+
Preference number: 5 (lower is better) Translates to: ARGEESPRCSQPFSQ*DHESFYVPASMLQH Trigger: GTGTTGAAGCATAGACGCTGGAACATAAAATGACTCATGATCTCACTGGGAGAAGGGCTGGGAACATCGTGGGCTCTCTTCTCCCCGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557778.1
CDS TCA 90 bp	TATGTTCCAGCGTCTATGCTTCAACACCTTCCAGATTTTCCTCCGTaGGCTGGCATCTCCTCCGTGAGCTGGCTCTTGGTGCTTTCAGAG	+
Preference number: 5 (lower is better) Translates to: YVPASMLQHLPDFPP*AGISSVSWLLVLSE Trigger: CTCTGAAAGCACCAAGAGCCAGCTCACGGAGGAGATGCCAGCTCACGGAGGAAAATCTGGAAGGTGTTGAAGCATAGACGCTGGAACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557778.1
CDS TCA 90 bp	AGAAGAGAGCCCACGATGTTCCCAGCCCTTCTCCCAGTGAGATCATaGGTCATTTTATGTTCCAGCGTCTATGCTTCAACACCTTCCAGA	+
Preference number: 5 (lower is better) Translates to: RREPTMFPALLPVRS*VILCSSVYASTPSR Trigger: TCTGGAAGGTGTTGAAGCATAGACGCTGGAACATAAAATGACTCATGATCTCACTGGGAGAAGGGCTGGGAACATCGTGGGCTCTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557778.1
CDS GCA 90 bp	CCTTCTCCCAGTGAGATCATGAGTCATTTTATGTTCCAGCGTCTATaGTTCAACACCTTCCAGATTTTCCTCCGTGAGCTGGCATCTCCT	+
Preference number: 5 (lower is better) Translates to: PSPSEIMSHFMFQRL*FNTFQIFLRELASP Trigger: AGGAGATGCCAGCTCACGGAGGAAAATCTGGAAGGTGTTGAAGCATAGACGCTGGAACATAAAATGACTCATGATCTCACTGGGAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557778.1
CDS TCA 72 bp	CCTTCAGGAGGTGCAGTTTGCAAAATCTGGACACAGTaGTGCCTCGGAGGGGCTTGTGGCGGGATGGTCGGG	+
Preference number: 6 (lower is better) Translates to: PSGGAVCKIWTQ*CLGGACGGMVG Trigger: CCCGACCATCCCGCCACAAGCCCCTCCGAGGCATCACTGTGTCCAGATTTTGCAAACTGCACCTCCTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557778.1
CDS TCA 72 bp	GTGGCGGGATGGTCGGGTGACCCCAGACCTCTAGTCTaGTGTAGTGCGCCGATGGTTCTAAACATCGTGGAA	+
Preference number: 6 (lower is better) Translates to: VAGWSGDPRPLV*CSAPMVLNIVE Trigger: TTCCACGATGTTTAGAACCATCGGCGCACTACATCAGACTAGAGGTCTGGGGTCACCCGACCATCCCGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557778.1
CDS TCA 72 bp	GAAGAGAGCCCACGATGTTCCCAGCCCTTCTCCCAGTaGGATCATGAGTCATTTTATGTTCCAGCGTCTATG	+
Preference number: 6 (lower is better) Translates to: EESPRCSQPFSQ*DHESFYVPASM Trigger: CATAGACGCTGGAACATAAAATGACTCATGATCTCACTGGGAGAAGGGCTGGGAACATCGTGGGCTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557778.1
CDS GCA 72 bp	AGTGAGATCATGAGTCATTTTATGTTCCAGCGTCTATaGTTCAACACCTTCCAGATTTTCCTCCGTGAGCTG	+
Preference number: 6 (lower is better) Translates to: SEIMSHFMFQRL*FNTFQIFLREL Trigger: CAGCTCACGGAGGAAAATCTGGAAGGTGTTGAAGCATAGACGCTGGAACATAAAATGACTCATGATCTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557778.1

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