Pregenerated sensors for LINC02319 (Homo sapiens)
Ensembl gene IDs: ENSG00000258694Ensembl transcript IDs: ENST00000555852.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | GACACTCTTTTCACTCCAGAGATTCCAATGGTGTTAGGAGCTGTGTaGCAGGAACCAGGAGCTTCTTTGATTTTATTTGCTTATTTGAGT | + |
Preference number: 5 (lower is better) Translates to: DTLFTPEIPMVLGAV*QEPGASLILFAYLS Trigger: ACTCAAATAAGCAAATAAAATCAAAGAAGCTCCTGGTTCCTGGCACACAGCTCCTAACACCATTGGAATCTCTGGAGTGAAAAGAGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555852.1 |
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CDS CCA 72 bp | GAAGCAACAGCCAAGGTTTATCAATGCCGGGTGTGGTaGTGTGGCGCCTGTTGTCCCAGCTACTCAGATGCT | + |
Preference number: 6 (lower is better) Translates to: EATAKVYQCRVW*CGACCPSYSDA Trigger: AGCATCTGAGTAGCTGGGACAACAGGCGCCACACCACCACACCCGGCATTGATAAACCTTGGCTGTTGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555852.1 |
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CDS CAA 90 bp | GCTGTGTGCCAGGAACCAGGAGCTTCTTTGATTTTATTTGCTTATTaGAGTAATCTTACTGTTACTAGTTATTCTGATGTTCTAGAATCA | + |
Preference number: 6 (lower is better) Translates to: AVCQEPGASLILFAY*SNLTVTSYSDVLES Trigger: TGATTCTAGAACATCAGAATAACTAGTAACAGTAAGATTACTCAAATAAGCAAATAAAATCAAAGAAGCTCCTGGTTCCTGGCACACAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555852.1 |