Pregenerated sensors for LINC02317 (Homo sapiens)
Ensembl gene IDs: ENSG00000258678Ensembl transcript IDs: ENST00000555413.1, ENST00000668106.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATCTCGGGTTCTGCCGCAGTTCACCCACCACCACACACTCGCCCATaGACGTCCTCCTCGCAGACCCCGGGGACCCTGGCCGGCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: ISGSAAVHPPPHTRP*TSSSQTPGTLAGQG Trigger: CCCCTGGCCGGCCAGGGTCCCCGGGGTCTGCGAGGAGGACGTTCATGGGCGAGTGTGTGGTGGTGGGTGAACTGCGGCAGAACCCGAGAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555413.1 ENST00000668106.1 |
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| CDS GCA 90 bp | CCAGACCTGCAAGAGGAGAGGGTTCCAGCTGTTAATCTCGGGTTCTaGCGCAGTTCACCCACCACCACACACTCGCCCATGAACGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: PDLQEERVPAVNLGF*RSSPTTTHSPMNVL Trigger: GAGGACGTTCATGGGCGAGTGTGTGGTGGTGGGTGAACTGCGGCAGAACCCGAGATTAACAGCTGGAACCCTCTCCTCTTGCAGGTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS GCA 90 bp | CCTCATCTGCAAGAGGAGAGGGTTCCAGCTGTTAATCTCGGGTTCTaGCGCAGTTCACCCACCACCACACACTCGCCCATGAACGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: PHLQEERVPAVNLGF*RSSPTTTHSPMNVL Trigger: GAGGACGTTCATGGGCGAGTGTGTGGTGGTGGGTGAACTGCGGCAGAACCCGAGATTAACAGCTGGAACCCTCTCCTCTTGCAGATGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS CCA 90 bp | ATGGCAACCCCAAGTTCCCTCAAGCCAGGAGGTCTGAAGCCTGTGTaGCCAGTGACCTGCCCGCTGCCGAATGATGGATTAAGCGCATGT | + |
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Preference number: 5 (lower is better) Translates to: MATPSSLKPGGLKPV*PVTCPLPNDGLSAC Trigger: ACATGCGCTTAATCCATCATTCGGCAGCGGGCAGGTCACTGGCCACACAGGCTTCAGACCTCCTGGCTTGAGGGAACTTGGGGTTGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS TCA 90 bp | AGGAGGTCTGAAGCCTGTGTGGCCAGTGACCTGCCCGCTGCCGAATaGTGGATTAAGCGCATGTCTGATGTACCGAATTGGCCACCAGAC | + |
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Preference number: 5 (lower is better) Translates to: RRSEACVASDLPAAE*WIKRMSDVPNWPPD Trigger: GTCTGGTGGCCAATTCGGTACATCAGACATGCGCTTAATCCATCATTCGGCAGCGGGCAGGTCACTGGCCACACAGGCTTCAGACCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS GCA 90 bp | AAGTTTCTTGATGTTGAGCAAGAACTCCCAGAAACTCCTGGAACCTaGTTCTCAGCCATGCGCGCCGGCGCAGCCCTGCTGTGTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: KFLDVEQELPETPGT*FSAMRAGAALLCGL Trigger: AAGGCCACACAGCAGGGCTGCGCCGGCGCGCATGGCTGAGAAGCAGGTTCCAGGAGTTTCTGGGAGTTCTTGCTCAACATCAAGAAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS GCA 90 bp | AGTTCCCTCAAGCCAGGAGGTCTGAAGCCTGTGTGGCCAGTGACCTaGCCGCTGCCGAATGATGGATTAAGCGCATGTCTGATGTACCGA | + |
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Preference number: 5 (lower is better) Translates to: SSLKPGGLKPVWPVT*PLPNDGLSACLMYR Trigger: TCGGTACATCAGACATGCGCTTAATCCATCATTCGGCAGCGGGCAGGTCACTGGCCACACAGGCTTCAGACCTCCTGGCTTGAGGGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CCA 90 bp | TGGATTAAGCGCATGTCTGATGTACCGAATTGGCCACCAGACTGCTaGTTGGATGTCTGCCAGGTTCCCTCACAAGCAGGCCTGCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: WIKRMSDVPNWPPDC*LDVCQVPSQAGLPD Trigger: ATCAGGCAGGCCTGCTTGTGAGGGAACCTGGCAGACATCCAACCAGCAGTCTGGTGGCCAATTCGGTACATCAGACATGCGCTTAATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CCA 90 bp | TTAAGCGCATGTCTGATGTACCGAATTGGCCACCAGACTGCTGGTTaGATGTCTGCCAGGTTCCCTCACAAGCAGGCCTGCCTGATATGT | + |
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Preference number: 5 (lower is better) Translates to: LSACLMYRIGHQTAG*MSARFPHKQACLIC Trigger: ACATATCAGGCAGGCCTGCTTGTGAGGGAACCTGGCAGACATCCAACCAGCAGTCTGGTGGCCAATTCGGTACATCAGACATGCGCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS GCA 90 bp | TCGGTCAGTCACTCAAACACCCTTGATTTCCCTGGTTTCCTCATCTaGAAGAGGAGAGGGTTCCAGCTGTTAATCTCGGGTTCTGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: SVSHSNTLDFPGFLI*KRRGFQLLISGSAA Trigger: TGCGGCAGAACCCGAGATTAACAGCTGGAACCCTCTCCTCTTGCAGATGAGGAAACCAGGGAAATCAAGGGTGTTTGAGTGACTGACCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS TCA 90 bp | CAGAGCTCTGGGCCTGTATCCTGGCTCCTTTACTTCCTAGCTGTGTaGCTTTCGGTCAGTCACTCAAACACCCTTGATTTCCCTGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: QSSGPVSWLLYFLAV*LSVSHSNTLDFPGF Trigger: GAAACCAGGGAAATCAAGGGTGTTTGAGTGACTGACCGAAAGTCACACAGCTAGGAAGTAAAGGAGCCAGGATACAGGCCCAGAGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS CCA 90 bp | TCATTGTCATTAGCAGGGCTGATACTCAGAGAGGTGGTGGGCAGCTaGAAGAGGAACTTCTGGTTTTGGTTTCAGATAAAACCAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SLSLAGLILREVVGS*KRNFWFWFQIKPEL Trigger: GAGCTCTGGTTTTATCTGAAACCAAAACCAGAAGTTCCTCTTCCAGCTGCCCACCACCTCTCTGAGTATCAGCCCTGCTAATGACAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS GCA 90 bp | CTTTTATTAACTGATCGCATTAACGTACAGTGCTTAGAACGATGCTaGAGAGCTGATGTTATCATTGTCATTAGCAGGGCTGATACTCAG | + |
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Preference number: 5 (lower is better) Translates to: LLLTDRINVQCLERC*RADVIIVISRADTQ Trigger: CTGAGTATCAGCCCTGCTAATGACAATGATAACATCAGCTCTGCAGCATCGTTCTAAGCACTGTACGTTAATGCGATCAGTTAATAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS GCA 90 bp | ATGCTTTTATTAACTGATCGCATTAACGTACAGTGCTTAGAACGATaGTGCAGAGCTGATGTTATCATTGTCATTAGCAGGGCTGATACT | + |
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Preference number: 5 (lower is better) Translates to: MLLLTDRINVQCLER*CRADVIIVISRADT Trigger: AGTATCAGCCCTGCTAATGACAATGATAACATCAGCTCTGCAGCATCGTTCTAAGCACTGTACGTTAATGCGATCAGTTAATAAAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS TCA 72 bp | TCTGCCGCAGTTCACCCACCACCACACACTCGCCCATaGACGTCCTCCTCGCAGACCCCGGGGACCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SAAVHPPPHTRP*TSSSQTPGTLA Trigger: GGCCAGGGTCCCCGGGGTCTGCGAGGAGGACGTTCATGGGCGAGTGTGTGGTGGTGGGTGAACTGCGGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555413.1 ENST00000668106.1 |
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| CDS GCA 72 bp | CAAGAGGAGAGGGTTCCAGCTGTTAATCTCGGGTTCTaGCGCAGTTCACCCACCACCACACACTCGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: QEERVPAVNLGF*RSSPTTTHSPM Trigger: CATGGGCGAGTGTGTGGTGGTGGGTGAACTGCGGCAGAACCCGAGATTAACAGCTGGAACCCTCTCCTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555413.1 ENST00000668106.1 |
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| CDS GCA 72 bp | AAGCCAGGAGGTCTGAAGCCTGTGTGGCCAGTGACCTaGCCGCTGCCGAATGATGGATTAAGCGCATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: KPGGLKPVWPVT*PLPNDGLSACL Trigger: CAGACATGCGCTTAATCCATCATTCGGCAGCGGGCAGGTCACTGGCCACACAGGCTTCAGACCTCCTGGCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CCA 72 bp | GAGGCGGGGCAGGGCCTTGGACTACTGTGTGCAGTTTaGATTCCTCCAGGCTTAAAATCGGCTTCCATCCCC | + |
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Preference number: 6 (lower is better) Translates to: EAGQGLGLLCAV*IPPGLKSASIP Trigger: GGGGATGGAAGCCGATTTTAAGCCTGGAGGAATCCAAACTGCACACAGTAGTCCAAGGCCCTGCCCCGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CCA 72 bp | CCAAGTTCCCTCAAGCCAGGAGGTCTGAAGCCTGTGTaGCCAGTGACCTGCCCGCTGCCGAATGATGGATTA | + |
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Preference number: 6 (lower is better) Translates to: PSSLKPGGLKPV*PVTCPLPNDGL Trigger: TAATCCATCATTCGGCAGCGGGCAGGTCACTGGCCACACAGGCTTCAGACCTCCTGGCTTGAGGGAACTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS GCA 72 bp | GTACCGAATTGGCCACCAGACTGCTGGTTGGATGTCTaGCAGGTTCCCTCACAAGCAGGCCTGCCTGATATG | + |
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Preference number: 6 (lower is better) Translates to: VPNWPPDCWLDV*QVPSQAGLPDM Trigger: CATATCAGGCAGGCCTGCTTGTGAGGGAACCTGGCAGACATCCAACCAGCAGTCTGGTGGCCAATTCGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CCA 72 bp | GTGGTTTCCAAAGCAAATCCAAGTCTTGTGCGGCTCTaGGCTGAGGGTCCCACGCTTTTCACCCAGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: VVSKANPSLVRL*AEGPTLFTQTC Trigger: GCAGGTCTGGGTGAAAAGCGTGGGACCCTCAGCCCAGAGCCGCACAAGACTTGGATTTGCTTTGGAAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CCA 72 bp | TGTCTGATGTACCGAATTGGCCACCAGACTGCTGGTTaGATGTCTGCCAGGTTCCCTCACAAGCAGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CLMYRIGHQTAG*MSARFPHKQAC Trigger: GCAGGCCTGCTTGTGAGGGAACCTGGCAGACATCCAACCAGCAGTCTGGTGGCCAATTCGGTACATCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CCA 72 bp | CGCATGTCTGATGTACCGAATTGGCCACCAGACTGCTaGTTGGATGTCTGCCAGGTTCCCTCACAAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RMSDVPNWPPDC*LDVCQVPSQAG Trigger: GCCTGCTTGTGAGGGAACCTGGCAGACATCCAACCAGCAGTCTGGTGGCCAATTCGGTACATCAGACATGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS TCA 72 bp | TTCCAAAGCAAATCCAAGTCTTGTGCGGCTCTGGGCTaGGGGTCCCACGCTTTTCACCCAGACCTGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FQSKSKSCAALG*GSHAFHPDLQE Trigger: CTCTTGCAGGTCTGGGTGAAAAGCGTGGGACCCTCAGCCCAGAGCCGCACAAGACTTGGATTTGCTTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS TCA 72 bp | GAAGCCTGTGTGGCCAGTGACCTGCCCGCTGCCGAATaGTGGATTAAGCGCATGTCTGATGTACCGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: EACVASDLPAAE*WIKRMSDVPNW Trigger: CCAATTCGGTACATCAGACATGCGCTTAATCCATCATTCGGCAGCGGGCAGGTCACTGGCCACACAGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CAA 72 bp | ATGTCTGATGTACCGAATTGGCCACCAGACTGCTGGTaGGATGTCTGCCAGGTTCCCTCACAAGCAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: MSDVPNWPPDCW*DVCQVPSQAGL Trigger: CAGGCCTGCTTGTGAGGGAACCTGGCAGACATCCAACCAGCAGTCTGGTGGCCAATTCGGTACATCAGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS GCA 72 bp | AAGCGCATGTCTGATGTACCGAATTGGCCACCAGACTaGTGGTTGGATGTCTGCCAGGTTCCCTCACAAGCA | + |
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Preference number: 6 (lower is better) Translates to: KRMSDVPNWPPD*WLDVCQVPSQA Trigger: TGCTTGTGAGGGAACCTGGCAGACATCCAACCAGCAGTCTGGTGGCCAATTCGGTACATCAGACATGCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CAA 90 bp | ATTAAGCGCATGTCTGATGTACCGAATTGGCCACCAGACTGCTGGTaGGATGTCTGCCAGGTTCCCTCACAAGCAGGCCTGCCTGATATG | + |
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Preference number: 6 (lower is better) Translates to: IKRMSDVPNWPPDCW*DVCQVPSQAGLPDM Trigger: CATATCAGGCAGGCCTGCTTGTGAGGGAACCTGGCAGACATCCAACCAGCAGTCTGGTGGCCAATTCGGTACATCAGACATGCGCTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668106.1 |
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| CDS CAA 90 bp | GATACTCAGAGAGGTGGTGGGCAGCTGGAAGAGGAACTTCTGGTTTaGGTTTCAGATAAAACCAGAGCTCTGGGCCTGTATCCTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DTQRGGGQLEEELLV*VSDKTRALGLYPGS Trigger: GGAGCCAGGATACAGGCCCAGAGCTCTGGTTTTATCTGAAACCAAAACCAGAAGTTCCTCTTCCAGCTGCCCACCACCTCTCTGAGTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS CAA 72 bp | AGAGGTGGTGGGCAGCTGGAAGAGGAACTTCTGGTTTaGGTTTCAGATAAAACCAGAGCTCTGGGCCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: RGGGQLEEELLV*VSDKTRALGLY Trigger: ATACAGGCCCAGAGCTCTGGTTTTATCTGAAACCAAAACCAGAAGTTCCTCTTCCAGCTGCCCACCACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS CCA 72 bp | AACTTCTGGTTTTGGTTTCAGATAAAACCAGAGCTCTaGGCCTGTATCCTGGCTCCTTTACTTCCTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: NFWFWFQIKPEL*ACILAPLLPSC Trigger: ACAGCTAGGAAGTAAAGGAGCCAGGATACAGGCCCAGAGCTCTGGTTTTATCTGAAACCAAAACCAGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS GCA 72 bp | ACTGATCGCATTAACGTACAGTGCTTAGAACGATGCTaGAGAGCTGATGTTATCATTGTCATTAGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: TDRINVQCLERC*RADVIIVISRA Trigger: AGCCCTGCTAATGACAATGATAACATCAGCTCTGCAGCATCGTTCTAAGCACTGTACGTTAATGCGATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS GCA 72 bp | TTAACTGATCGCATTAACGTACAGTGCTTAGAACGATaGTGCAGAGCTGATGTTATCATTGTCATTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LTDRINVQCLER*CRADVIIVISR Trigger: CCTGCTAATGACAATGATAACATCAGCTCTGCAGCATCGTTCTAAGCACTGTACGTTAATGCGATCAGTTAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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| CDS GCA 72 bp | AAGATGCTTTTATTAACTGATCGCATTAACGTACAGTaGTTAGAACGATGCTGCAGAGCTGATGTTATCATT | + |
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Preference number: 6 (lower is better) Translates to: KMLLLTDRINVQ*LERCCRADVII Trigger: AATGATAACATCAGCTCTGCAGCATCGTTCTAAGCACTGTACGTTAATGCGATCAGTTAATAAAAGCATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555413.1 |
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