Pregenerated sensors for LINC02316 (Homo sapiens)
Ensembl gene IDs: ENSG00000258912Ensembl transcript IDs: ENST00000553346.1, ENST00000656341.1, ENST00000656430.1, ENST00000658687.1, ENST00000659154.1, ENST00000662254.1, ENST00000665672.1, ENST00000665839.1, ENST00000666170.1, ENST00000668938.1, ENST00000669427.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACTCCTCTGCAAGATGACCTCCTCCTGCATGCACACAGCAGCCACTaGCTCATAGCAGCCCGAGAGCCCCCAAATCCCTCTGAAAATTGC | + |
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Preference number: 5 (lower is better) Translates to: TPLQDDLLLHAHSSH*LIAAREPPNPSENC Trigger: GCAATTTTCAGAGGGATTTGGGGGCTCTCGGGCTGCTATGAGCCAGTGGCTGCTGTGTGCATGCAGGAGGAGGTCATCTTGCAGAGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS GCA 90 bp | CACTGGCTCATAGCAGCCCGAGAGCCCCCAAATCCCTCTGAAAATTaGTGTGAAACAGAGGTTTGCCTCTCTTTCCTGAGAACCAGAATG | + |
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Preference number: 5 (lower is better) Translates to: HWLIAAREPPNPSEN*CETEVCLSFLRTRM Trigger: CATTCTGGTTCTCAGGAAAGAGAGGCAAACCTCTGTTTCACAGCAATTTTCAGAGGGATTTGGGGGCTCTCGGGCTGCTATGAGCCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS GCA 90 bp | CGAGAGCCCCCAAATCCCTCTGAAAATTGCTGTGAAACAGAGGTTTaGCTCTCTTTCCTGAGAACCAGAATGAGTCAGAAGCCCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: REPPNPSENCCETEV*LSFLRTRMSQKPST Trigger: TGTACTGGGCTTCTGACTCATTCTGGTTCTCAGGAAAGAGAGGCAAACCTCTGTTTCACAGCAATTTTCAGAGGGATTTGGGGGCTCTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS CCA 90 bp | CCTCTCTTTCCTGAGAACCAGAATGAGTCAGAAGCCCAGTACACATaGGAACAGTTGAGCCTTTGGATCTTCTGTGCAGTTTCTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: PLFPENQNESEAQYT*EQLSLWIFCAVSPF Trigger: GAAAGGAGAAACTGCACAGAAGATCCAAAGGCTCAACTGTTCCCATGTGTACTGGGCTTCTGACTCATTCTGGTTCTCAGGAAAGAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS GCA 90 bp | TTTATCTTTCTTTATTTCCCTGCAAAGCTAACATCTCTACTCCTCTaGAAGATGACCTCCTCCTGCATGCACACAGCAGCCACTGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: FIFLYFPAKLTSLLL*KMTSSCMHTAATGS Trigger: TGAGCCAGTGGCTGCTGTGTGCATGCAGGAGGAGGTCATCTTGCAGAGGAGTAGAGATGTTAGCTTTGCAGGGAAATAAAGAAAGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS GCA 90 bp | ATATGCTTCCAAGGTCACTCAGGCTGTTGGCAGAATTCATTTCCTTaGAGTAGTAGACTAAGGTATCCACTGCATTCCTGGCTGTCAACC | + |
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Preference number: 5 (lower is better) Translates to: ICFQGHSGCWQNSFP*SSRLRYPLHSWLST Trigger: GGTTGACAGCCAGGAATGCAGTGGATACCTTAGTCTACTACTGCAAGGAAATGAATTCTGCCAACAGCCTGAGTGACCTTGGAAGCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656430.1 ENST00000658687.1 |
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| CDS GCA 90 bp | AAAGAGCATAGAATGAACATCAAGAGAACAGGACTTCTGCCTGCATaGCCCAGATTTGAATCCTTGGCCCAAACAGTCATTTCTATGTGC | + |
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Preference number: 5 (lower is better) Translates to: KEHRMNIKRTGLLPA*PRFESLAQTVISMC Trigger: GCACATAGAAATGACTGTTTGGGCCAAGGATTCAAATCTGGGGCATGCAGGCAGAAGTCCTGTTCTCTTGATGTTCATTCTATGCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665839.1 |
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| CDS CCA 90 bp | AATGAAGTGAATTTCCACCAATTTCTTTGTGCAGCTAGGAAATTTTaGAGGTTCCTCTTGTTTTCCCACACTAGAGGGAGAGGGCATGAG | + |
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Preference number: 5 (lower is better) Translates to: NEVNFHQFLCAARKF*RFLLFSHTRGRGHE Trigger: CTCATGCCCTCTCCCTCTAGTGTGGGAAAACAAGAGGAACCTCCAAAATTTCCTAGCTGCACAAAGAAATTGGTGGAAATTCACTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000656341.1 ENST00000658687.1 ENST00000662254.1 ENST00000665672.1 ENST00000665839.1 ENST00000666170.1 ENST00000668938.1 |
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| CDS GCA 90 bp | AGAAGCCCAGTACACATGGGAACAGTTGAGCCTTTGGATCTTCTGTaGAGTTTCTCCTTTCTGATAAGTTATTCTTTTCTTGCAAATGAT | + |
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Preference number: 5 (lower is better) Translates to: RSPVHMGTVEPLDLL*SFSFLISYSFLAND Trigger: ATCATTTGCAAGAAAAGAATAACTTATCAGAAAGGAGAAACTGCACAGAAGATCCAAAGGCTCAACTGTTCCCATGTGTACTGGGCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS TCA 90 bp | GTCTCTATACTCCTACTGGACTTCCACAATTTGTACAAGTCAAAATaGAGAACATTAGTTCTAAAGAACAGTCAAGAACCATTGTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: VSILLLDFHNLYKSK*RTLVLKNSQEPLCN Trigger: ATTGCACAATGGTTCTTGACTGTTCTTTAGAACTAATGTTCTTCATTTTGACTTGTACAAATTGTGGAAGTCCAGTAGGAGTATAGAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656430.1 |
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| CDS CCA 72 bp | CAAGATGACCTCCTCCTGCATGCACACAGCAGCCACTaGCTCATAGCAGCCCGAGAGCCCCCAAATCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QDDLLLHAHSSH*LIAAREPPNPS Trigger: AGAGGGATTTGGGGGCTCTCGGGCTGCTATGAGCCAGTGGCTGCTGTGTGCATGCAGGAGGAGGTCATCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS GCA 72 bp | ACCACTCTCACCTTCTGGAGGCCACTCTTAGATCCCTaGCACGTGCCCCACTCCATCTCAGCAATGGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: TTLTFWRPLLDP*HVPHSISAMEN Trigger: ATTCTCCATTGCTGAGATGGAGTGGGGCACGTGGCAGGGATCTAAGAGTGGCCTCCAGAAGGTGAGAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656430.1 ENST00000658687.1 |
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| CDS GCA 72 bp | ATAGCAGCCCGAGAGCCCCCAAATCCCTCTGAAAATTaGTGTGAAACAGAGGTTTGCCTCTCTTTCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: IAAREPPNPSEN*CETEVCLSFLR Trigger: TCTCAGGAAAGAGAGGCAAACCTCTGTTTCACAGCAATTTTCAGAGGGATTTGGGGGCTCTCGGGCTGCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS CCA 72 bp | CCTGAGAACCAGAATGAGTCAGAAGCCCAGTACACATaGGAACAGTTGAGCCTTTGGATCTTCTGTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PENQNESEAQYT*EQLSLWIFCAV Trigger: AACTGCACAGAAGATCCAAAGGCTCAACTGTTCCCATGTGTACTGGGCTTCTGACTCATTCTGGTTCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS GCA 72 bp | CAAGGTCACTCAGGCTGTTGGCAGAATTCATTTCCTTaGAGTAGTAGACTAAGGTATCCACTGCATTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QGHSGCWQNSFP*SSRLRYPLHSW Trigger: CCAGGAATGCAGTGGATACCTTAGTCTACTACTGCAAGGAAATGAATTCTGCCAACAGCCTGAGTGACCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656430.1 ENST00000658687.1 |
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| CDS TCA 72 bp | TACGGTGTTGTCCAGATGTGTACTTATCTGGAGTCTTaGCTAGAGAAAGATATGCTTCCAAGGTCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: YGVVQMCTYLES*LEKDMLPRSLR Trigger: CCTGAGTGACCTTGGAAGCATATCTTTCTCTAGTCAAGACTCCAGATAAGTACACATCTGGACAACACCGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656430.1 ENST00000658687.1 |
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| CDS GCA 72 bp | CCAAATCCCTCTGAAAATTGCTGTGAAACAGAGGTTTaGCTCTCTTTCCTGAGAACCAGAATGAGTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PNPSENCCETEV*LSFLRTRMSQK Trigger: CTTCTGACTCATTCTGGTTCTCAGGAAAGAGAGGCAAACCTCTGTTTCACAGCAATTTTCAGAGGGATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656341.1 ENST00000659154.1 ENST00000662254.1 ENST00000665672.1 ENST00000668938.1 |
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| CDS CCA 72 bp | GTATATGGTAAAGATAAAGCACTTGGTTCCAATCCCTaGAGATTCTGGAGATTTAGAGCTTCTGGAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VYGKDKALGSNP*RFWRFRASGGH Trigger: GTGGCCTCCAGAAGCTCTAAATCTCCAGAATCTCCAGGGATTGGAACCAAGTGCTTTATCTTTACCATATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662254.1 ENST00000665672.1 ENST00000669427.1 |
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| CDS GCA 72 bp | TCCAATTCCCATTCTGCTACTAGCCCGAGAAAATTCTaGTTTGAAAGGGCTCATGTGATTAGATCAGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SNSHSATSPRKF*FERAHVIRSVS Trigger: TGAGACTGATCTAATCACATGAGCCCTTTCAAAGCAGAATTTTCTCGGGCTAGTAGCAGAATGGGAATTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656430.1 ENST00000658687.1 ENST00000662254.1 ENST00000665672.1 ENST00000669427.1 |
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| CDS CCA 72 bp | GTATATGGTAAAGATAAAGCACTTGGTTCCAATCCCTaGAGATTCTGGAGATTTAGAGAAGTGGGATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VYGKDKALGSNP*RFWRFREVGLL Trigger: CAGCAATCCCACTTCTCTAAATCTCCAGAATCTCCAGGGATTGGAACCAAGTGCTTTATCTTTACCATATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000553346.1 ENST00000656341.1 ENST00000659154.1 ENST00000665839.1 ENST00000666170.1 ENST00000668938.1 |
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| CDS CCA 72 bp | AATTTCCACCAATTTCTTTGTGCAGCTAGGAAATTTTaGAGGTTCCTCTTGTTTTCCCACACTAGAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: NFHQFLCAARKF*RFLLFSHTRGR Trigger: TCTCCCTCTAGTGTGGGAAAACAAGAGGAACCTCCAAAATTTCCTAGCTGCACAAAGAAATTGGTGGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000656341.1 ENST00000658687.1 ENST00000662254.1 ENST00000665672.1 ENST00000665839.1 ENST00000666170.1 ENST00000668938.1 |
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| CDS TCA 72 bp | ACTGATAAATATGTCCTCACAAATGGACGTAGCACTTaGAAGGTTTTGGAGCTATATGGCTCTGTACATGTC | + |
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Preference number: 6 (lower is better) Translates to: TDKYVLTNGRST*KVLELYGSVHV Trigger: GACATGTACAGAGCCATATAGCTCCAAAACCTTTCAAGTGCTACGTCCATTTGTGAGGACATATTTATCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000553346.1 ENST00000665839.1 ENST00000666170.1 ENST00000669427.1 |
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| CDS TCA 72 bp | AAAATCCCCTCACAGCAATACCTGGAGTCATATTATTaGATAACCTTGGCTGTTGTAAATAATGCCGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: KIPSQQYLESYY*ITLAVVNNAAV Trigger: CACTGCGGCATTATTTACAACAGCCAAGGTTATTCAATAATATGACTCCAGGTATTGCTGTGAGGGGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662254.1 |
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| CDS CCA 72 bp | AAAGATAAAGCACTTGGTTCCAATCCCTGGAGATTCTaGAGATTTAGAGAAGTGGGATTGCTGAATCATATG | + |
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Preference number: 6 (lower is better) Translates to: KDKALGSNPWRF*RFREVGLLNHM Trigger: CATATGATTCAGCAATCCCACTTCTCTAAATCTCCAGAATCTCCAGGGATTGGAACCAAGTGCTTTATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000553346.1 ENST00000656341.1 ENST00000659154.1 ENST00000665839.1 ENST00000666170.1 ENST00000668938.1 |
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| CDS TCA 72 bp | AAAATCCCCTCACAGCAATACCTGGAGTCATATTATTaGATAACAAGTGGGATTGCTGAATCATATGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: KIPSQQYLESYY*ITSGIAESYGS Trigger: ACTACCATATGATTCAGCAATCCCACTTGTTATTCAATAATATGACTCCAGGTATTGCTGTGAGGGGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658687.1 ENST00000665672.1 |
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| CDS CCA 72 bp | ATGTCCTCACAAATGGACGTAGCACTTGAAAGGTTTTaGAGCTATATGGCTCTGTACATGTCATTATTATAT | + |
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Preference number: 6 (lower is better) Translates to: MSSQMDVALERF*SYMALYMSLLY Trigger: ATATAATAATGACATGTACAGAGCCATATAGCTCCAAAACCTTTCAAGTGCTACGTCCATTTGTGAGGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000553346.1 ENST00000665839.1 ENST00000666170.1 ENST00000669427.1 |
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| CDS CAA 72 bp | GCAGTCAAATTAACACAGCTATCATCAATACCCATGTaGTTCATTAGATTTCCAGAACTGGTTCATGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: AVKLTQLSSIPM*FIRFPELVHVR Trigger: TCTGACATGAACCAGTTCTGGAAATCTAATGAACAACATGGGTATTGATGATAGCTGTGTTAATTTGACTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656430.1 |
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