Pregenerated sensors for LINC02315 (Homo sapiens)
Ensembl gene IDs: ENSG00000251363Ensembl transcript IDs: ENST00000515218.2, ENST00000651006.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCGTGTGCGAGCCGAAGCAGGGCGAGGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: RVHLTRECQTVGAGQ*VRAPCASRSRARHC Trigger: GCAGTGCCTCGCCCTGCTTCGGCTCGCACACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651006.1 |
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| CDS TCA 90 bp | CAGCTCCAGTCTACAGCTCCCACCGTGAGCGACGCAGAAGACGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGG | + |
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Preference number: 5 (lower is better) Translates to: QLQSTAPTVSDAEDG*FLHFHLRYRVHLTR Trigger: CCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGGTGGGAGCTGTAGACTGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651006.1 |
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| CDS TCA 90 bp | CTTTTCTTCTTCTCCTGTAACCAGACACTGAATCCTCAGGCACCATaGTCTTGGACTTTCCAGTCTCCAGAACATCTAATGTTGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LFFFSCNQTLNPQAP*SWTFQSPEHLMLLK Trigger: CTTCAGCAACATTAGATGTTCTGGAGACTGGAAAGTCCAAGATCATGGTGCCTGAGGATTCAGTGTCTGGTTACAGGAGAAGAAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651006.1 |
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| CDS TCA 90 bp | AGAAATAAGGGAATTACAACAGGCATTAGTTCTGAAAGGCTTGCCTaGGGGTTTCAGGTGAACTTACCTAATGACAAACAAGATAGCATC | + |
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Preference number: 5 (lower is better) Translates to: RNKGITTGISSERLA*GFQVNLPNDKQDSI Trigger: GATGCTATCTTGTTTGTCATTAGGTAAGTTCACCTGAAACCCTCAGGCAAGCCTTTCAGAACTAATGCCTGTTGTAATTCCCTTATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515218.2 |
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| CDS GCA 72 bp | CTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTGGGTaGGCGCACCGTGTGCGAGCCGAAGCAGGGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LGSARQWAQVSG*AHRVRAEAGRG Trigger: GCCTCGCCCTGCTTCGGCTCGCACACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651006.1 |
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| CDS CCA 72 bp | CTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCGTGTGCGAGCCGAAGCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LTRECQTVGAGQ*VRAPCASRSRA Trigger: CGCCCTGCTTCGGCTCGCACACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651006.1 |
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| CDS GCA 72 bp | CGCGCACCGTGTGCGAGCCGAAGCAGGGCGAGGCACTaGCTCACTCAGAAAGCGCAAGGGGTCAGGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RAPCASRSRARH*LTQKAQGVREF Trigger: GAACTCCCTGACCCCTTGCGCTTTCTGAGTGAGGCAGTGCCTCGCCCTGCTTCGGCTCGCACACGGTGCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651006.1 |
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| CDS TCA 72 bp | CCGAATAGGAACAGCTCCAGTCTACAGCTCCCACCGTaGGCGACGCAGAAGACGGGTGATTTCTGCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: PNRNSSSLQLPP*ATQKTGDFCIS Trigger: GGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGGTGGGAGCTGTAGACTGGAGCTGTTCCTATTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651006.1 |
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| CDS TCA 72 bp | TCTACAGCTCCCACCGTGAGCGACGCAGAAGACGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: STAPTVSDAEDG*FLHFHLRYRVH Trigger: ATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGGTGGGAGCTGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651006.1 |
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| CDS CAA 72 bp | GGTCCACCAGACACTGAATCCTCAGGCACCATGATCTaGGACTTTCCAGTCTCCAGAACATCTAATGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GPPDTESSGTMI*DFPVSRTSNVA Trigger: AGCAACATTAGATGTTCTGGAGACTGGAAAGTCCAAGATCATGGTGCCTGAGGATTCAGTGTCTGGTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515218.2 |
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| CDS TCA 72 bp | CTTGTTGCGTTAGACAGCTTCCAAGATGGTCTCCAATaGTTTTCACCTCATGATATCCACCTTTTTATGTAT | + |
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Preference number: 6 (lower is better) Translates to: LVALDSFQDGLQ*FSPHDIHLFMY Trigger: ATACATAAAAAGGTGGATATCATGAGGTGAAAATCATTGGAGACCATCTTGGAAGCTGTCTAACGCAACAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515218.2 |
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| CDS TCA 72 bp | CTAATGACAAACAAGATAGCATCTGTTATACAGATTTaGAAACGTGCTGAGTCTGATAACCAATCATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LMTNKIASVIQI*KRAESDNQSFQ Trigger: TTGGAATGATTGGTTATCAGACTCAGCACGTTTTCAAATCTGTATAACAGATGCTATCTTGTTTGTCATTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515218.2 |
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