Pregenerated sensors for LINC02312 (Homo sapiens)
Ensembl gene IDs: ENSG00000258869Ensembl transcript IDs: ENST00000555187.1, ENST00000557296.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCTCCGCTCACGGACACGCTCCAGTGTGCCATCAGATTTCACCTTaGGCCCCCTCCCTGAGCAGAGAAGCTGTAGGCTGTGTGAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: SSAHGHAPVCHQISP*APSLSREAVGCVRV Trigger: GACCCTCACACAGCCTACAGCTTCTCTGCTCAGGGAGGGGGCTCAAGGTGAAATCTGATGGCACACTGGAGCGTGTCCGTGAGCGGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557296.1 |
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| CDS GCA 90 bp | CCTGAGTGCTCAGCCGCAGCCTCGTGTAGTAGGCTGTGTTCAGGATaGGGGCCTTTAGTAAAGATTCTGGAGCTAACAGCTCCTGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: PECSAAASCSRLCSG*GPLVKILELTAPVG Trigger: ACCCACAGGAGCTGTTAGCTCCAGAATCTTTACTAAAGGCCCGCATCCTGAACACAGCCTACTACACGAGGCTGCGGCTGAGCACTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 90 bp | TTAAGGGCAATGGGAGGGTTATTTGTCCTGAGCGATTGTCCTGAGTaGTCAGCCGCAGCCTCGTGTAGTAGGCTGTGTTCAGGATGCGGG | + |
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Preference number: 5 (lower is better) Translates to: LRAMGGLFVLSDCPE*SAAASCSRLCSGCG Trigger: CCCGCATCCTGAACACAGCCTACTACACGAGGCTGCGGCTGAGCACTCAGGACAATCGCTCAGGACAAATAACCCTCCCATTGCCCTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 90 bp | GCGGGTCCCTCACAATTCCACATTCATGGGGCATCTGGGGCATCATaGGCATGCTGCATTAATGGGCAGCAAGGAAAGGTGAACACACCC | + |
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Preference number: 5 (lower is better) Translates to: AGPSQFHIHGASGAS*ACCINGQQGKVNTP Trigger: GGGTGTGTTCACCTTTCCTTGCTGCCCATTAATGCAGCATGCTCATGATGCCCCAGATGCCCCATGAATGTGGAATTGTGAGGGACCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS TCA 90 bp | GACAGGGACTGCTCAGAAGGCAGAGGTTTCAAGGTCTCATGGAGATaGGATCCACTTCCCAGGTTATGTACTGATGGGGGTGGTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: DRDCSEGRGFKVSWR*DPLPRLCTDGGGGD Trigger: GTCACCACCACCCCCATCAGTACATAACCTGGGAAGTGGATCTCATCTCCATGAGACCTTGAAACCTCTGCCTTCTGAGCAGTCCCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CCA 90 bp | ATGACTTACCTTGGACTCACTTTGAGCCTCTCTGAACTCCCATGCTaGCGGGTCCCTCACAATTCCACATTCATGGGGCATCTGGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: MTYLGLTLSLSELPC*RVPHNSTFMGHLGH Trigger: ATGCCCCAGATGCCCCATGAATGTGGAATTGTGAGGGACCCGCCAGCATGGGAGTTCAGAGAGGCTCAAAGTGAGTCCAAGGTAAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS GCA 90 bp | AATATGACTTACCTTGGACTCACTTTGAGCCTCTCTGAACTCCCATaGTGGCGGGTCCCTCACAATTCCACATTCATGGGGCATCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: NMTYLGLTLSLSELP*WRVPHNSTFMGHLG Trigger: CCCCAGATGCCCCATGAATGTGGAATTGTGAGGGACCCGCCAGCATGGGAGTTCAGAGAGGCTCAAAGTGAGTCCAAGGTAAGTCATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS CCA 90 bp | TTTCCCAGGCTGCGGTATCCTTGGCTTCCTGTTGCGTTGTGCCAATaGAAGTCACAGGAAGGAGACAGGAAGTTAGGAGGAGTAAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: FPRLRYPWLPVALCQ*KSQEGDRKLGGVKR Trigger: TCTTTTTACTCCTCCTAACTTCCTGTCTCCTTCCTGTGACTTCCATTGGCACAACGCAACAGGAAGCCAAGGATACCGCAGCCTGGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 90 bp | TTTATGAAATCCATTTCCCAGGCTGCGGTATCCTTGGCTTCCTGTTaGGTTGTGCCAATGGAAGTCACAGGAAGGAGACAGGAAGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: FMKSISQAAVSLASC*VVPMEVTGRRQEVR Trigger: CCTAACTTCCTGTCTCCTTCCTGTGACTTCCATTGGCACAACGCAACAGGAAGCCAAGGATACCGCAGCCTGGGAAATGGATTTCATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 90 bp | TTATCTGTTGCTGGAGTTGCCCTTTATGAAATCCATTTCCCAGGCTaGGGTATCCTTGGCTTCCTGTTGCGTTGTGCCAATGGAAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: LSVAGVALYEIHFPG*GILGFLLRCANGSH Trigger: GTGACTTCCATTGGCACAACGCAACAGGAAGCCAAGGATACCGCAGCCTGGGAAATGGATTTCATAAAGGGCAACTCCAGCAACAGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 90 bp | TTCAGGAAAGCCAACTTCCAGGGCCAGTATGTACAGCTGTGTGAGTaGATAATTCCAGGGATAAGAATGTTCATGTTGTGCTTGGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: FRKANFQGQYVQLCE*IIPGIRMFMLCLAW Trigger: CCACGCCAAGCACAACATGAACATTCTTATCCCTGGAATTATGCACTCACACAGCTGTACATACTGGCCCTGGAAGTTGGCTTTCCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 90 bp | TCCATTCAGGAAAGCCAACTTCCAGGGCCAGTATGTACAGCTGTGTaGGTGCATAATTCCAGGGATAAGAATGTTCATGTTGTGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: SIQESQLPGPVCTAV*VHNSRDKNVHVVLG Trigger: GCCAAGCACAACATGAACATTCTTATCCCTGGAATTATGCACTCACACAGCTGTACATACTGGCCCTGGAAGTTGGCTTTCCTGAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 90 bp | GATAAGAATGTTCATGTTGTGCTTGGCGTGGTGCAGTGCATAACCTaGACAACTGTATATGATGATCCTCCTTGGAATTCACGCTACCAC | + |
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Preference number: 5 (lower is better) Translates to: DKNVHVVLGVVQCIT*TTVYDDPPWNSRYH Trigger: GTGGTAGCGTGAATTCCAAGGAGGATCATCATATACAGTTGTGCAGGTTATGCACTGCACCACGCCAAGCACAACATGAACATTCTTATC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CCA 90 bp | TTCAGAGAAAGGGAAAGCATCCCCAAAGATCACATAGATTACGAGTaGCAGAGACAGGATAGACTCAAACTTGTGATGCCAGAGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: FRERESIPKDHIDYE*QRQDRLKLVMPESM Trigger: CATTGACTCTGGCATCACAAGTTTGAGTCTATCCTGTCTCTGCCACTCGTAATCTATGTGATCTTTGGGGATGCTTTCCCTTTCTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 90 bp | GTCACTTTTTGGATAACAATAATAGCAATGCAGTTAACTTGTTATTaGACACATGCCATGTGCCAGGCCGTATTTGAATCCTCTGCATGC | + |
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Preference number: 5 (lower is better) Translates to: VTFWITIIAMQLTCY*THAMCQAVFESSAC Trigger: GCATGCAGAGGATTCAAATACGGCCTGGCACATGGCATGTGTTCAATAACAAGTTAACTGCATTGCTATTATTGTTATCCAAAAAGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 72 bp | ACTCTTTACCTTCCTCTCACAGGGAATGAGGGGGACTaGGAGGAACGGGAAATCTGGGCCCTGCCCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: TLYLPLTGNEGD*EEREIWALPSP Trigger: AGGGGAGGGCAGGGCCCAGATTTCCCGTTCCTCTCAGTCCCCCTCATTCCCTGTGAGAGGAAGGTAAAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 72 bp | CATGAGCATGCTGCATTAATGGGCAGCAAGGAAAGGTaGACACACCCATTGCACTTCCCTCCTCCGCTCACG | + |
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Preference number: 6 (lower is better) Translates to: HEHAALMGSKER*THPLHFPPPLT Trigger: CGTGAGCGGAGGAGGGAAGTGCAATGGGTGTGTTCACCTTTCCTTGCTGCCCATTAATGCAGCATGCTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS GCA 72 bp | TACCTTGGACTCACTTTGAGCCTCTCTGAACTCCCATaGTGGCGGGTCCCTCACAATTCCACATTCATGGGG | + |
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Preference number: 6 (lower is better) Translates to: YLGLTLSLSELP*WRVPHNSTFMG Trigger: CCCCATGAATGTGGAATTGTGAGGGACCCGCCAGCATGGGAGTTCAGAGAGGCTCAAAGTGAGTCCAAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS GCA 72 bp | ATGGGAGGGTTATTTGTCCTGAGCGATTGTCCTGAGTaGTCAGCCGCAGCCTCGTGTAGTAGGCTGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: MGGLFVLSDCPE*SAAASCSRLCS Trigger: TGAACACAGCCTACTACACGAGGCTGCGGCTGAGCACTCAGGACAATCGCTCAGGACAAATAACCCTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 72 bp | ATGTTCAAACCCATGAGTCAGGGGCGGGGCTGGTCTTaGTTGGCCGAGACCAAGGTAAAGGGACTCTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: MFKPMSQGRGWS*LAETKVKGLLS Trigger: ACTTAAGAGTCCCTTTACCTTGGTCTCGGCCAAGCAAGACCAGCCCCGCCCCTGACTCATGGGTTTGAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CCA 72 bp | CTTGGACTCACTTTGAGCCTCTCTGAACTCCCATGCTaGCGGGTCCCTCACAATTCCACATTCATGGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LGLTLSLSELPC*RVPHNSTFMGH Trigger: ATGCCCCATGAATGTGGAATTGTGAGGGACCCGCCAGCATGGGAGTTCAGAGAGGCTCAAAGTGAGTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS CAA 72 bp | TTTCCCAGGCTGCGGTATCCTTGGCTTCCTGTTGCGTaGTGCCAATGGAAGTCACAGGAAGGAGACAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: FPRLRYPWLPVA*CQWKSQEGDRK Trigger: CTTCCTGTCTCCTTCCTGTGACTTCCATTGGCACAACGCAACAGGAAGCCAAGGATACCGCAGCCTGGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 72 bp | TCAGCCGCAGCCTCGTGTAGTAGGCTGTGTTCAGGATaGGGGCCTTTAGTAAAGATTCTGGAGCTAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SAAASCSRLCSG*GPLVKILELTA Trigger: AGCTGTTAGCTCCAGAATCTTTACTAAAGGCCCGCATCCTGAACACAGCCTACTACACGAGGCTGCGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CCA 72 bp | CTGCGGTATCCTTGGCTTCCTGTTGCGTTGTGCCAATaGAAGTCACAGGAAGGAGACAGGAAGTTAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LRYPWLPVALCQ*KSQEGDRKLGG Trigger: TCCTCCTAACTTCCTGTCTCCTTCCTGTGACTTCCATTGGCACAACGCAACAGGAAGCCAAGGATACCGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 72 bp | ATCCATTTCCCAGGCTGCGGTATCCTTGGCTTCCTGTaGCGTTGTGCCAATGGAAGTCACAGGAAGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: IHFPGCGILGFL*RCANGSHRKET Trigger: TGTCTCCTTCCTGTGACTTCCATTGGCACAACGCAACAGGAAGCCAAGGATACCGCAGCCTGGGAAATGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 90 bp | CTGGAGTTGCCCTTTATGAAATCCATTTCCCAGGCTGCGGTATCCTaGGCTTCCTGTTGCGTTGTGCCAATGGAAGTCACAGGAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LELPFMKSISQAAVS*ASCCVVPMEVTGRR Trigger: TCTCCTTCCTGTGACTTCCATTGGCACAACGCAACAGGAAGCCAAGGATACCGCAGCCTGGGAAATGGATTTCATAAAGGGCAACTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 90 bp | ACGGGTTCCCAGCCCCAAGGAAACACTTCTCTGCTCTGTTATCTGTaGCTGGAGTTGCCCTTTATGAAATCCATTTCCCAGGCTGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: TGSQPQGNTSLLCYL*LELPFMKSISQAAV Trigger: TACCGCAGCCTGGGAAATGGATTTCATAAAGGGCAACTCCAGCAACAGATAACAGAGCAGAGAAGTGTTTCCTTGGGGCTGGGAACCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 90 bp | CGTTGGATGAGAGAGCCAAGAGGTCAGAATCCCACAAGGATGGGATaGGAACAAAGGGAACCAGGGATGTTTAAGGGCAATGGGAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: RWMREPRGQNPTRMG*EQREPGMFKGNGRV Trigger: AACCCTCCCATTGCCCTTAAACATCCCTGGTTCCCTTTGTTCCAATCCCATCCTTGTGGGATTCTGACCTCTTGGCTCTCTCATCCAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 72 bp | GCTGGAGTTGCCCTTTATGAAATCCATTTCCCAGGCTaGGGTATCCTTGGCTTCCTGTTGCGTTGTGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: AGVALYEIHFPG*GILGFLLRCAN Trigger: ATTGGCACAACGCAACAGGAAGCCAAGGATACCGCAGCCTGGGAAATGGATTTCATAAAGGGCAACTCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CCA 72 bp | TGTACTGATGGGGGTGGTGGTGACAGACCCAGGTTATaGAGGCTACTGGATGAAGAGTGCATTCTAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CTDGGGGDRPRL*RLLDEECILVS Trigger: AGAGACTAGAATGCACTCTTCATCCAGTAGCCTCCATAACCTGGGTCTGTCACCACCACCCCCATCAGTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 72 bp | AAATATGACTTACCTTGGACTCACTTTGAGCCTCTCTaGACTCCCATGCTGGCGGGTCCCTCACAATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: KYDLPWTHFEPL*TPMLAGPSQFH Trigger: GTGGAATTGTGAGGGACCCGCCAGCATGGGAGTTCAGAGAGGCTCAAAGTGAGTCCAAGGTAAGTCATATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS TCA 72 bp | TGCTCAGAAGGCAGAGGTTTCAAGGTCTCATGGAGATaGGATCCACTTCCCAGGTTATGTACTGATGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: CSEGRGFKVSWR*DPLPRLCTDGG Trigger: ACCCCCATCAGTACATAACCTGGGAAGTGGATCTCATCTCCATGAGACCTTGAAACCTCTGCCTTCTGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CCA 72 bp | CCCAATTCTACATTCTCCAAGGCTGATCTCAGGAACTaGAGAAGGCTGAGGGCTGAGGTCATGATGGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: PNSTFSKADLRN*RRLRAEVMMEN Trigger: ATTCTCCATCATGACCTCAGCCCTCAGCCTTCTCCAGTTCCTGAGATCAGCCTTGGAGAATGTAGAATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CCA 72 bp | AGTAAAATCAAAGGAGTCAAGGGGAGGGTAACCCGTTaGATGAGAGAGCCAAGAGGTCAGAATCCCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: SKIKGVKGRVTR*MREPRGQNPTR Trigger: CCTTGTGGGATTCTGACCTCTTGGCTCTCTCATCCAACGGGTTACCCTCCCCTTGACTCCTTTGATTTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 72 bp | CCCTTTATGAAATCCATTTCCCAGGCTGCGGTATCCTaGGCTTCCTGTTGCGTTGTGCCAATGGAAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: PFMKSISQAAVS*ASCCVVPMEVT Trigger: TGTGACTTCCATTGGCACAACGCAACAGGAAGCCAAGGATACCGCAGCCTGGGAAATGGATTTCATAAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 72 bp | GTTTGGATAGAAAATATGACTTACCTTGGACTCACTTaGAGCCTCTCTGAACTCCCATGCTGGCGGGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VWIENMTYLGLT*SLSELPCWRVP Trigger: AGGGACCCGCCAGCATGGGAGTTCAGAGAGGCTCAAAGTGAGTCCAAGGTAAGTCATATTTTCTATCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS CAA 90 bp | CAAATCCTGGTTTGGATAGAAAATATGACTTACCTTGGACTCACTTaGAGCCTCTCTGAACTCCCATGCTGGCGGGTCCCTCACAATTCC | + |
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Preference number: 6 (lower is better) Translates to: QILVWIENMTYLGLT*SLSELPCWRVPHNS Trigger: GGAATTGTGAGGGACCCGCCAGCATGGGAGTTCAGAGAGGCTCAAAGTGAGTCCAAGGTAAGTCATATTTTCTATCCAAACCAGGATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS CAA 90 bp | ACGCTACCACAATTCTGGTCCCTACTTATTGGTAGGAATGATGACTaGCTAATCCCAGTGACAGGCCGGTCCCAATTCTACATTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: TLPQFWSLLIGRNDD*LIPVTGRSQFYILQ Trigger: TTGGAGAATGTAGAATTGGGACCGGCCTGTCACTGGGATTAGCAAGTCATCATTCCTACCAATAAGTAGGGACCAGAATTGTGGTAGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 72 bp | CATGGACCTTTAACAACCCCACAGGTGAATCAGATGTaGAACTCACTCTCACAGAGGGATCTGAGTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: HGPLTTPQVNQM*NSLSQRDLSSH Trigger: ATGTGAACTCAGATCCCTCTGTGAGAGTGAGTTGCACATCTGATTCACCTGTGGGGTTGTTAAAGGTCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CCA 72 bp | CCTTTCCTCCTAAACACCAATTTCAATGGGCATAGTTaGCCAATGCAGGGAAGCAACACGAGTAAGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: PFLLNTNFNGHS*PMQGSNTSKEG Trigger: TCCTTCCTTACTCGTGTTGCTTCCCTGCATTGGCCAACTATGCCCATTGAAATTGGTGTTTAGGAGGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS CAA 72 bp | CAGCCCCAAGGAAACACTTCTCTGCTCTGTTATCTGTaGCTGGAGTTGCCCTTTATGAAATCCATTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QPQGNTSLLCYL*LELPFMKSISQ Trigger: CTGGGAAATGGATTTCATAAAGGGCAACTCCAGCAACAGATAACAGAGCAGAGAAGTGTTTCCTTGGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 72 bp | CAATTCTGGTCCCTACTTATTGGTAGGAATGATGACTaGCTAATCCCAGTGACAGGCCGGTCCCAATTCTAC | + |
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Preference number: 6 (lower is better) Translates to: QFWSLLIGRNDD*LIPVTGRSQFY Trigger: GTAGAATTGGGACCGGCCTGTCACTGGGATTAGCAAGTCATCATTCCTACCAATAAGTAGGGACCAGAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 90 bp | CAGAGGAACATTGAGGAAGACTTAGGAAAAGACCAAGCATTCCAGTaGGGTTTTGAATCACAAGCAAAGGTTTGCCTGGCACTGGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: QRNIEEDLGKDQAFQ*GFESQAKVCLALVG Trigger: TCCTACCAGTGCCAGGCAAACCTTTGCTTGTGATTCAAAACCCAACTGGAATGCTTGGTCTTTTCCTAAGTCTTCCTCAATGTTCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 72 bp | GCACGAAACAAGCTCACCTGTTTTCCTTTCACTTCTTaGTACGTGCACGTTTCATCCGCACTCTTTACCTTC | + |
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Preference number: 6 (lower is better) Translates to: ARNKLTCFPFTS*YVHVSSALFTF Trigger: GAAGGTAAAGAGTGCGGATGAAACGTGCACGTATCAAGAAGTGAAAGGAAAACAGGTGAGCTTGTTTCGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 72 bp | AGACTTAGGAAAAGACCAAGCATTCCAGTTGGGTTTTaGATCACAAGCAAAGGTTTGCCTGGCACTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RLRKRPSIPVGF*ITSKGLPGTGR Trigger: CCTACCAGTGCCAGGCAAACCTTTGCTTGTGATTCAAAACCCAACTGGAATGCTTGGTCTTTTCCTAAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 72 bp | ACAAGCTCACCTGTTTTCCTTTCACTTCTTGATACGTaGACGTTTCATCCGCACTCTTTACCTTCCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: TSSPVFLSLLDT*TFHPHSLPSSH Trigger: GTGAGAGGAAGGTAAAGAGTGCGGATGAAACGTGCACGTATCAAGAAGTGAAAGGAAAACAGGTGAGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS GCA 72 bp | GTTCATGTTGTGCTTGGCGTGGTGCAGTGCATAACCTaGACAACTGTATATGATGATCCTCCTTGGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: VHVVLGVVQCIT*TTVYDDPPWNS Trigger: TGAATTCCAAGGAGGATCATCATATACAGTTGTGCAGGTTATGCACTGCACCACGCCAAGCACAACATGAAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 72 bp | GAAAGCCAACTTCCAGGGCCAGTATGTACAGCTGTGTaGGTGCATAATTCCAGGGATAAGAATGTTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: ESQLPGPVCTAV*VHNSRDKNVHV Trigger: AACATGAACATTCTTATCCCTGGAATTATGCACTCACACAGCTGTACATACTGGCCCTGGAAGTTGGCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 90 bp | CAGGAAGGAGACAGGAAGTTAGGAGGAGTAAAAAGAACTTTATTCTaGGTGTTTCTTATTCCTTTTCAGTGTTGCTCCAGCAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QEGDRKLGGVKRTLF*VFLIPFQCCSSSSS Trigger: GCTGCTGCTGCTGGAGCAACACTGAAAAGGAATAAGAAACACCAAGAATAAAGTTCTTTTTACTCCTCCTAACTTCCTGTCTCCTTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 72 bp | ATTGAGGAAGACTTAGGAAAAGACCAAGCATTCCAGTaGGGTTTTGAATCACAAGCAAAGGTTTGCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: IEEDLGKDQAFQ*GFESQAKVCLA Trigger: TGCCAGGCAAACCTTTGCTTGTGATTCAAAACCCAACTGGAATGCTTGGTCTTTTCCTAAGTCTTCCTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 72 bp | GGGATGAATAGCAAACATTTCTTATCTTTGCAGCTCTaGAAGGTGTGTAGCTACCTTTGTAAACCCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: GMNSKHFLSLQL*KVCSYLCKPNG Trigger: GCCATTGGGTTTACAAAGGTAGCTACACACCTTCAAGAGCTGCAAAGATAAGAAATGTTTGCTATTCATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CCA 72 bp | CTAAGTAGTTCATTCATAGTAGAAACTCTGCTCTTTTaGACCTGTCTGATCAACCTAAGGGAAAAGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: LSSSFIVETLLF*TCLINLREKDG Trigger: TCCATCCTTTTCCCTTAGGTTGATCAGACAGGTCCAAAAGAGCAGAGTTTCTACTATGAATGAACTACTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS TCA 72 bp | TGGATAACAATAATAGCAATGCAGTTAACTTGTTATTaGACACATGCCATGTGCCAGGCCGTATTTGAATCC | + |
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Preference number: 6 (lower is better) Translates to: WITIIAMQLTCY*THAMCQAVFES Trigger: GGATTCAAATACGGCCTGGCACATGGCATGTGTTCAATAACAAGTTAACTGCATTGCTATTATTGTTATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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| CDS CAA 72 bp | TGGTGCCTTCTTTCTTCATTTGATGCAAATCCTGGTTaGGATAGAAAATATGACTTACCTTGGACTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: WCLLSSFDANPG*DRKYDLPWTHF Trigger: AAAGTGAGTCCAAGGTAAGTCATATTTTCTATCCAAACCAGGATTTGCATCAAATGAAGAAAGAAGGCACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555187.1 ENST00000557296.1 |
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| CDS CAA 72 bp | CACTTTTTGGATAACAATAATAGCAATGCAGTTAACTaGTTATTGAACACATGCCATGTGCCAGGCCGTATT | + |
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Preference number: 6 (lower is better) Translates to: HFLDNNNSNAVN*LLNTCHVPGRI Trigger: AATACGGCCTGGCACATGGCATGTGTTCAATAACAAGTTAACTGCATTGCTATTATTGTTATCCAAAAAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555187.1 |
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