Pregenerated sensors for LINC02306 (Homo sapiens)
Ensembl gene IDs: ENSG00000257986Ensembl transcript IDs: ENST00000546412.2, ENST00000657312.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCTTCCCTCCTAGGTTTCTTTGTTCTGCCAGTGCCGAGTCTCTTTaGGCCTCTCTCTGCAGCAGGTCTGGAACCAATACTTCCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: SFPPRFLCSASAESL*ASLCSRSGTNTSPF Trigger: GAATGGGGAAGTATTGGTTCCAGACCTGCTGCAGAGAGAGGCTCAAAGAGACTCGGCACTGGCAGAACAAAGAAACCTAGGAGGGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS CCA 90 bp | AGGATTGATTATTTGGTGAGGGATGTTCTCTGCTTCCTTCCGATATaGCACATTGTCGCTGTGTCTTCCAGAAGGGAGAGGGGAGGAACA | + |
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Preference number: 5 (lower is better) Translates to: RIDYLVRDVLCFLPI*HIVAVSSRRERGGT Trigger: TGTTCCTCCCCTCTCCCTTCTGGAAGACACAGCGACAATGTGCCATATCGGAAGGAAGCAGAGAACATCCCTCACCAAATAATCAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657312.1 |
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| CDS CCA 90 bp | AGAACCACATCAGATGATGGTGGAGTAGTTCTAGTTCTGGAGGCTTaGAAGTCCAAGATCAATCAGCCCACATCCGATGATGGCCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: RTTSDDGGVVLVLEA*KSKINQPTSDDGLH Trigger: ATGAAGGCCATCATCGGATGTGGGCTGATTGATCTTGGACTTCCAAGCCTCCAGAACTAGAACTACTCCACCATCATCTGATGTGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546412.2 ENST00000657312.1 |
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| CDS TCA 90 bp | GCTGAGAAGTTCATAATTAAGGCACCAGCAGGATTGATTATTTGGTaGGGGATGTTCTCTGCTTCCTTCCGATATGGCACATTGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: AEKFIIKAPAGLIIW*GMFSASFRYGTLSL Trigger: CAGCGACAATGTGCCATATCGGAAGGAAGCAGAGAACATCCCTCACCAAATAATCAATCCTGCTGGTGCCTTAATTATGAACTTCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657312.1 |
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| CDS TCA 90 bp | AGTTCTGGAGGCTTGGAAGTCCAAGATCAATCAGCCCACATCCGATaGTGGCCTTCATGTATTTTGCTAAGAGCCATAAGATCAGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SSGGLEVQDQSAHIR*WPSCILLRAIRSAF Trigger: AAAAGCTGATCTTATGGCTCTTAGCAAAATACATGAAGGCCATCATCGGATGTGGGCTGATTGATCTTGGACTTCCAAGCCTCCAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS TCA 90 bp | TACGAGGTCCTAGGCTCACATTTTATCTTAAGGTATCCCTCTTTATaGCAGAGCAATACAGAAAGACACACAAAGTACACTAGATTCACT | + |
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Preference number: 5 (lower is better) Translates to: YEVLGSHFILRYPSL*QSNTERHTKYTRFT Trigger: AGTGAATCTAGTGTACTTTGTGTGTCTTTCTGTATTGCTCTGTCATAAAGAGGGATACCTTAAGATAAAATGTGAGCCTAGGACCTCGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS GCA 90 bp | CTTCCCATTAATCAAAACTTTACAGAGGTGATAAACAATGATTTTTaGCATTCATTCAACCAGTTTGCAGAGAGAGAGAGAGAGACAGAC | + |
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Preference number: 5 (lower is better) Translates to: LPINQNFTEVINNDF*HSFNQFAERERETD Trigger: GTCTGTCTCTCTCTCTCTCTCTGCAAACTGGTTGAATGAATGGCAAAAATCATTGTTTATCACCTCTGTAAAGTTTTGATTAATGGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS GCA 90 bp | ACTATAGACAATTTAAGTCTTCTGGAATTTTCACTCTTCACAGTTTaGCACAGTCATGTGAGAAATCAGTGTCTTCCTTTCCAATCGCAT | + |
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Preference number: 5 (lower is better) Translates to: TIDNLSLLEFSLFTV*HSHVRNQCLPFQSH Trigger: ATGCGATTGGAAAGGAAGACACTGATTTCTCACATGACTGTGGCAAACTGTGAAGAGTGAAAATTCCAGAAGACTTAAATTGTCTATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657312.1 |
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| CDS TCA 90 bp | TCTCAAAGCTTCAGCTTATCTAACTTAAAACAATCCTTTAACCCTTaGAACTTAGGCAAGAAATCCACATTCCTGTGCCTTCTTATAATC | + |
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Preference number: 5 (lower is better) Translates to: SQSFSLSNLKQSFNP*NLGKKSTFLCLLII Trigger: GATTATAAGAAGGCACAGGAATGTGGATTTCTTGCCTAAGTTTCAAGGGTTAAAGGATTGTTTTAAGTTAGATAAGCTGAAGCTTTGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS TCA 72 bp | GGCACAGCTGGAACTGACCAGTTCGCTGGGCCATTCTaGACAACAAGCTTACGAGGTCCTAGGCTCACATTT | + |
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Preference number: 6 (lower is better) Translates to: GTAGTDQFAGPF*TTSLRGPRLTF Trigger: AAATGTGAGCCTAGGACCTCGTAAGCTTGTTGTTCAGAATGGCCCAGCGAACTGGTCAGTTCCAGCTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS CAA 72 bp | GCAAGGCTCAAACTTGTCCCCAGTTGGGCTCAGTCATaGGTAATCCAACCTCTGACCAGGAGTCTCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: ARLKLVPSWAQS*VIQPLTRSLSL Trigger: CAAGCTGAGACTCCTGGTCAGAGGTTGGATTACCAATGACTGAGCCCAACTGGGGACAAGTTTGAGCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS CAA 90 bp | TGGGCTCAGTCATTGGTAATCCAACCTCTGACCAGGAGTCTCAGCTaGTGTTCTCTGGGCAAGATGGTCACCCCAAAGTCAGCCTATTGG | + |
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Preference number: 6 (lower is better) Translates to: WAQSLVIQPLTRSLS*CSLGKMVTPKSAYW Trigger: CCAATAGGCTGACTTTGGGGTGACCATCTTGCCCAGAGAACACAAGCTGAGACTCCTGGTCAGAGGTTGGATTACCAATGACTGAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS TCA 72 bp | CCTAGGTTTCTTTGTTCTGCCAGTGCCGAGTCTCTTTaGGCCTCTCTCTGCAGCAGGTCTGGAACCAATACT | + |
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Preference number: 6 (lower is better) Translates to: PRFLCSASAESL*ASLCSRSGTNT Trigger: AGTATTGGTTCCAGACCTGCTGCAGAGAGAGGCTCAAAGAGACTCGGCACTGGCAGAACAAAGAAACCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS GCA 72 bp | GTGAGCCTCTTTACAGCATTACTTTGGCTTCCTCATTaGATGGCAGCTGGGTCTAGGAGCACGTGTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: VSLFTALLWLPH*MAAGSRSTCSK Trigger: CTTGGAACACGTGCTCCTAGACCCAGCTGCCATGCAATGAGGAAGCCAAAGTAATGCTGTAAAGAGGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS CCA 72 bp | GCCTCTTTACAGCATTACTTTGGCTTCCTCATTGCATaGCAGCTGGGTCTAGGAGCACGTGTTCCAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: ASLQHYFGFLIA*QLGLGARVPRG Trigger: ACCTCTTGGAACACGTGCTCCTAGACCCAGCTGCCATGCAATGAGGAAGCCAAAGTAATGCTGTAAAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS CCA 72 bp | GTTCCTCTCCATGTGAGCCTCTTTACAGCATTACTTTaGCTTCCTCATTGCATGGCAGCTGGGTCTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VPLHVSLFTALL*LPHCMAAGSRS Trigger: GCTCCTAGACCCAGCTGCCATGCAATGAGGAAGCCAAAGTAATGCTGTAAAGAGGCTCACATGGAGAGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS CAA 90 bp | ATCACATTGGCAAGGCTCAAACTTGTCCCCAGTTGGGCTCAGTCATaGGTAATCCAACCTCTGACCAGGAGTCTCAGCTTGTGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ITLARLKLVPSWAQS*VIQPLTRSLSLCSL Trigger: CAGAGAACACAAGCTGAGACTCCTGGTCAGAGGTTGGATTACCAATGACTGAGCCCAACTGGGGACAAGTTTGAGCCTTGCCAATGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS TCA 72 bp | ATTTTTACTATGCCAGGCTTCTGGGTTCCCCTTCCCTaGGCAAACCTGGTAACCCAGCAAGCTGTATCACAG | + |
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Preference number: 6 (lower is better) Translates to: IFTMPGFWVPLP*ANLVTQQAVSQ Trigger: CTGTGATACAGCTTGCTGGGTTACCAGGTTTGCTCAGGGAAGGGGAACCCAGAAGCCTGGCATAGTAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS CCA 72 bp | TATTTGGTGAGGGATGTTCTCTGCTTCCTTCCGATATaGCACATTGTCGCTGTGTCTTCCAGAAGGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: YLVRDVLCFLPI*HIVAVSSRRER Trigger: CCTCTCCCTTCTGGAAGACACAGCGACAATGTGCCATATCGGAAGGAAGCAGAGAACATCCCTCACCAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657312.1 |
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| CDS CAA 72 bp | TCATTGGTAATCCAACCTCTGACCAGGAGTCTCAGCTaGTGTTCTCTGGGCAAGATGGTCACCCCAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SLVIQPLTRSLS*CSLGKMVTPKS Trigger: TGACTTTGGGGTGACCATCTTGCCCAGAGAACACAAGCTGAGACTCCTGGTCAGAGGTTGGATTACCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS CAA 72 bp | CAATTTGGGGCATCTAGGCTAAAAGCACGTTCTTCTTaGTGCTTTCTGCTCTGGCAGCACCAGACTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: QFGASRLKARSS*CFLLWQHQTPP Trigger: AGGTGGAGTCTGGTGCTGCCAGAGCAGAAAGCACAAAGAAGAACGTGCTTTTAGCCTAGATGCCCCAAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657312.1 |
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| CDS GCA 72 bp | GAGAGACACCAGAAGTTTGGTAAGAAATTTTTACTATaGCAGGCTTCTGGGTTCCCCTTCCCTGAGCAAACC | + |
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Preference number: 6 (lower is better) Translates to: ERHQKFGKKFLL*QASGFPFPEQT Trigger: GGTTTGCTCAGGGAAGGGGAACCCAGAAGCCTGGCATAGTAAAAATTTCTTACCAAACTTCTGGTGTCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS GCA 72 bp | ACCAGCAGGATTGATTATTTGGTGAGGGATGTTCTCTaGTTCCTTCCGATATGGCACATTGTCGCTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: TSRIDYLVRDVL*FLPIWHIVAVS Trigger: AGACACAGCGACAATGTGCCATATCGGAAGGAAGCAGAGAACATCCCTCACCAAATAATCAATCCTGCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657312.1 |
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| CDS CCA 72 bp | TCAGATGATGGTGGAGTAGTTCTAGTTCTGGAGGCTTaGAAGTCCAAGATCAATCAGCCCACATCCGATGAT | + |
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Preference number: 6 (lower is better) Translates to: SDDGGVVLVLEA*KSKINQPTSDD Trigger: ATCATCGGATGTGGGCTGATTGATCTTGGACTTCCAAGCCTCCAGAACTAGAACTACTCCACCATCATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546412.2 ENST00000657312.1 |
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| CDS TCA 72 bp | GGCTTGGAAGTCCAAGATCAATCAGCCCACATCCGATaGTGGCCTTCATGTATTTTGCTAAGAGCCATAAGA | + |
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Preference number: 6 (lower is better) Translates to: GLEVQDQSAHIR*WPSCILLRAIR Trigger: TCTTATGGCTCTTAGCAAAATACATGAAGGCCATCATCGGATGTGGGCTGATTGATCTTGGACTTCCAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS TCA 72 bp | CTAGGCTCACATTTTATCTTAAGGTATCCCTCTTTATaGCAGAGCAATACAGAAAGACACACAAAGTACACT | + |
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Preference number: 6 (lower is better) Translates to: LGSHFILRYPSL*QSNTERHTKYT Trigger: AGTGTACTTTGTGTGTCTTTCTGTATTGCTCTGTCATAAAGAGGGATACCTTAAGATAAAATGTGAGCCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS CAA 72 bp | CAATTTAAGTCTTCTGGAATTTTCACTCTTCACAGTTaGCCACAGTCATGTGAGAAATCAGTGTCTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: QFKSSGIFTLHS*PQSCEKSVSSF Trigger: AAAGGAAGACACTGATTTCTCACATGACTGTGGCAAACTGTGAAGAGTGAAAATTCCAGAAGACTTAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657312.1 |
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| CDS TCA 72 bp | TTCAGCTTATCTAACTTAAAACAATCCTTTAACCCTTaGAACTTAGGCAAGAAATCCACATTCCTGTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: FSLSNLKQSFNP*NLGKKSTFLCL Trigger: AAGGCACAGGAATGTGGATTTCTTGCCTAAGTTTCAAGGGTTAAAGGATTGTTTTAAGTTAGATAAGCTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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| CDS TCA 72 bp | CACAGACAGTATACAATGTGCTTGGACTTTCTGACTTaGCCTAAATATCTTTTTAAGCAACCAGTCATTTTA | + |
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Preference number: 6 (lower is better) Translates to: HRQYTMCLDFLT*PKYLFKQPVIL Trigger: TAAAATGACTGGTTGCTTAAAAAGATATTTAGGTCAAGTCAGAAAGTCCAAGCACATTGTATACTGTCTGTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546412.2 |
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