Pregenerated sensors for LINC02303 (Homo sapiens)
Ensembl gene IDs: ENSG00000258616Ensembl transcript IDs: ENST00000554431.5, ENST00000554711.5, ENST00000554810.1, ENST00000555442.1, ENST00000557602.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCCTGTTCAGGTGCCACTTGTGGCAGAGTGCCCTGGTTACTACTTaGGACCGTCATTACAGCAATTACTACTGTTACTGCTTGAGACCG | + |
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Preference number: 5 (lower is better) Translates to: SLFRCHLWQSALVTT*DRHYSNYYCYCLRP Trigger: CGGTCTCAAGCAGTAACAGTAGTAATTGCTGTAATGACGGTCTCAAGTAGTAACCAGGGCACTCTGCCACAAGTGGCACCTGAACAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555442.1 |
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| CDS CCA 90 bp | TTTATAGAACCCGGTTCACTTTGTGTCACTTCAATTGCCGGTTGGTaGTTTGTTCTGTCTTCGTATTCAGCTCATACTGGGGGAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: FIEPGSLCVTSIAGW*FVLSSYSAHTGGTR Trigger: CCTGGTTCCCCCAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAACCGGGTTCTATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CCA 90 bp | CTCTGTATTTGTAAGGAGCTATCATTTACTTCAATTGCCGGTTGGTaGTTTGTTCTGTCTTCGTATTCAGCTCATACTGGGGGAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: LCICKELSFTSIAGW*FVLSSYSAHTGGTR Trigger: CCTGGTTCCCCCAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTAAATGATAGCTCCTTACAAATACAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557602.1 |
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| CDS CCA 90 bp | GTCCTCTGTATTTGTAAGGAGCTATCATTTACTTCAATTGCCGGTTaGTGGTTTGTTCTGTCTTCGTATTCAGCTCATACTGGGGGAACC | + |
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Preference number: 5 (lower is better) Translates to: VLCICKELSFTSIAG*WFVLSSYSAHTGGT Trigger: GGTTCCCCCAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTAAATGATAGCTCCTTACAAATACAGAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557602.1 |
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| CDS GCA 90 bp | TCCATGGTAATTTATAGAACCCGGTTCACTTTGTGTCACTTCAATTaGCGGTTGGTGGTTTGTTCTGTCTTCGTATTCAGCTCATACTGG | + |
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Preference number: 5 (lower is better) Translates to: SMVIYRTRFTLCHFN*RLVVCSVFVFSSYW Trigger: CCAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAACCGGGTTCTATAAATTACCATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CCA 72 bp | GTATTCAGCTCATACTGGGGGAACCAGGCCCACGGTTaGGATCCATGTGTCCCTCCAATCTCCCATTCCATG | + |
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Preference number: 6 (lower is better) Translates to: VFSSYWGNQAHG*DPCVPPISHSM Trigger: CATGGAATGGGAGATTGGAGGGACACATGGATCCCAACCGTGGGCCTGGTTCCCCCAGTATGAGCTGAATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554431.5 ENST00000554711.5 ENST00000557602.1 |
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| CDS CAA 72 bp | CGTATTCAGCTCATACTGGGGGAACCAGGCCCACGGTaGGGATCCATGTGTCCCTCCAATCTCCCATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RIQLILGEPGPR*GSMCPSNLPFH Trigger: ATGGAATGGGAGATTGGAGGGACACATGGATCCCAACCGTGGGCCTGGTTCCCCCAGTATGAGCTGAATACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554431.5 ENST00000554711.5 ENST00000557602.1 |
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| CDS CAA 72 bp | GTCCCTCCAATCTCCCATTCCATGGTAGTACACACCTaGGGGGCACCCACACTTTTTGTTCATTTCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VPPISHSMVVHT*GAPTLFVHFLQ Trigger: TTGCAGGAAATGAACAAAAAGTGTGGGTGCCCCCAAGGTGTGTACTACCATGGAATGGGAGATTGGAGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000557602.1 |
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| CDS CAA 90 bp | GATCCATGTGTCCCTCCAATCTCCCATTCCATGGTAGTACACACCTaGGGGGCACCCACACTTTTTGTTCATTTCCTTATGTTGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: DPCVPPISHSMVVHT*GAPTLFVHFLMLLP Trigger: TGGCAGCAACATAAGGAAATGAACAAAAAGTGTGGGTGCCCCCAAGGTGTGTACTACCATGGAATGGGAGATTGGAGGGACACATGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CCA 72 bp | CCCGGTTCACTTTGTGTCACTTCAATTGCCGGTTGGTaGTTTGTTCTGTCTTCGTATTCAGCTCATACTGGG | + |
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Preference number: 6 (lower is better) Translates to: PGSLCVTSIAGW*FVLSSYSAHTG Trigger: CCCAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAACCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CAA 90 bp | GTATTTGTAAGGAGCTATCATTTACTTCAATTGCCGGTTGGTGGTTaGTTCTGTCTTCGTATTCAGCTCATACTGGGGGAACCAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VFVRSYHLLQLPVGG*FCLRIQLILGEPGP Trigger: TGGGCCTGGTTCCCCCAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTAAATGATAGCTCCTTACAAATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557602.1 |
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| CDS GCA 72 bp | TGGGGGCACCCACACTTTTTGTTCATTTCCTTATGTTaGTGCCAGCAGACTTGTAACAGGGTTTCTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: WGHPHFLFISLC*CQQTCNRVSCS Trigger: TGAACAAGAAACCCTGTTACAAGTCTGCTGGCAGCAACATAAGGAAATGAACAAAAAGTGTGGGTGCCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CCA 72 bp | GAACCCGGTTCACTTTGTGTCACTTCAATTGCCGGTTaGTGGTTTGTTCTGTCTTCGTATTCAGCTCATACT | + |
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Preference number: 6 (lower is better) Translates to: EPGSLCVTSIAG*WFVLSSYSAHT Trigger: AGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAACCGGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CAA 72 bp | GTTCACTTTGTGTCACTTCAATTGCCGGTTGGTGGTTaGTTCTGTCTTCGTATTCAGCTCATACTGGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VHFVSLQLPVGG*FCLRIQLILGE Trigger: TTCCCCCAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CAA 72 bp | AGAACCCGGTTCACTTTGTGTCACTTCAATTGCCGGTaGGTGGTTTGTTCTGTCTTCGTATTCAGCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: RTRFTLCHFNCR*VVCSVFVFSSY Trigger: GTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAACCGGGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CAA 90 bp | GTAATTTATAGAACCCGGTTCACTTTGTGTCACTTCAATTGCCGGTaGGTGGTTTGTTCTGTCTTCGTATTCAGCTCATACTGGGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VIYRTRFTLCHFNCR*VVCSVFVFSSYWGN Trigger: GTTCCCCCAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAACCGGGTTCTATAAATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CAA 90 bp | GTTGGCTCACCACTTTCCATGGTAATTTATAGAACCCGGTTCACTTaGTGTCACTTCAATTGCCGGTTGGTGGTTTGTTCTGTCTTCGTA | + |
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Preference number: 6 (lower is better) Translates to: VGSPLSMVIYRTRFT*CHFNCRLVVCSVFV Trigger: TACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAACCGGGTTCTATAAATTACCATGGAAAGTGGTGAGCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CAA 90 bp | GTTGGCTCACCACTTTCCATGGTAATTTATAGAACCCGGTTCACTTaGTGTCACTTATGTTGCTGCCAGCAGACTTGTAACAGGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VGSPLSMVIYRTRFT*CHLCCCQQTCNRVS Trigger: AGAAACCCTGTTACAAGTCTGCTGGCAGCAACATAAGTGACACAAAGTGAACCGGGTTCTATAAATTACCATGGAAAGTGGTGAGCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554810.1 |
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| CDS CAA 72 bp | TTCCATAGTCCCTTTTGTTTGCATATCCTCAGGGTTTaGTTCTGCCAAATCGTTGGCTCACCACTTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: FHSPFCLHILRV*FCQIVGSPLSM Trigger: CATGGAAAGTGGTGAGCCAACGATTTGGCAGAACAAAACCCTGAGGATATGCAAACAAAAGGGACTATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000554431.5 ENST00000554711.5 ENST00000554810.1 ENST00000555442.1 ENST00000557602.1 |
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| CDS GCA 72 bp | ATTTATAGAACCCGGTTCACTTTGTGTCACTTCAATTaGCGGTTGGTGGTTTGTTCTGTCTTCGTATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: IYRTRFTLCHFN*RLVVCSVFVFS Trigger: GCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAACCGGGTTCTATAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CCA 72 bp | TGTAAGGAGCTATCATTTACTTCAATTGCCGGTTGGTaGTTTGTTCTGTCTTCGTATTCAGCTCATACTGGG | + |
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Preference number: 6 (lower is better) Translates to: CKELSFTSIAGW*FVLSSYSAHTG Trigger: CCCAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTAAATGATAGCTCCTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557602.1 |
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| CDS CAA 72 bp | CCACTTTCCATGGTAATTTATAGAACCCGGTTCACTTaGTGTCACTTCAATTGCCGGTTGGTGGTTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PLSMVIYRTRFT*CHFNCRLVVCS Trigger: AGAACAAACCACCAACCGGCAATTGAAGTGACACAAAGTGAACCGGGTTCTATAAATTACCATGGAAAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554711.5 |
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| CDS CAA 72 bp | CCACTTTCCATGGTAATTTATAGAACCCGGTTCACTTaGTGTCACTTATGTTGCTGCCAGCAGACTTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: PLSMVIYRTRFT*CHLCCCQQTCN Trigger: GTTACAAGTCTGCTGGCAGCAACATAAGTGACACAAAGTGAACCGGGTTCTATAAATTACCATGGAAAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554810.1 |
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| CDS CAA 90 bp | AAAACTTATCCCTTCCTAGGAAATAGAATGGGCATCATCCTTCAATaGCCGGTTGGTGGTTTGTTCTGTCTTCGTATTCAGCTCATACTG | + |
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Preference number: 6 (lower is better) Translates to: KTYPFLGNRMGIILQ*PVGGLFCLRIQLIL Trigger: CAGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGGATGATGCCCATTCTATTTCCTAGGAAGGGATAAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554431.5 |
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| CDS GCA 72 bp | ATTTATAGAACCCGGTTCACTTTGTGTCACTTATGTTaGTGCCAGCAGACTTGTAACAGGGTTTCTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: IYRTRFTLCHLC*CQQTCNRVSCS Trigger: TGAACAAGAAACCCTGTTACAAGTCTGCTGGCAGCAACATAAGTGACACAAAGTGAACCGGGTTCTATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554810.1 |
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| CDS CAA 90 bp | AATTGCAAATTCCATAGTCCCTTTTGTTTGCATATCCTCAGGGTTTaGTTCTGCCAAATCGTTGGCTCACCACTTTCCATGGTAATTTAT | + |
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Preference number: 6 (lower is better) Translates to: NCKFHSPFCLHILRV*FCQIVGSPLSMVIY Trigger: ATAAATTACCATGGAAAGTGGTGAGCCAACGATTTGGCAGAACAAAACCCTGAGGATATGCAAACAAAAGGGACTATGGAATTTGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000554431.5 ENST00000554711.5 ENST00000554810.1 ENST00000555442.1 ENST00000557602.1 |
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| CDS CCA 72 bp | ATTTGTAAGGAGCTATCATTTACTTCAATTGCCGGTTaGTGGTTTGTTCTGTCTTCGTATTCAGCTCATACT | + |
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Preference number: 6 (lower is better) Translates to: ICKELSFTSIAG*WFVLSSYSAHT Trigger: AGTATGAGCTGAATACGAAGACAGAACAAACCACCAACCGGCAATTGAAGTAAATGATAGCTCCTTACAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557602.1 |
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