Pregenerated sensors for LINC02302 (Homo sapiens)
Ensembl gene IDs: ENSG00000258998Ensembl transcript IDs: ENST00000556405.1, ENST00000665816.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTTGGTGTCACTGTCTCCCATCACCCTCAGATGGGACCGTCTAGTTaGAGGAAAACAAGCTCAGGGCTCCCACTGAGTCTACATTATGGA | + |
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Preference number: 5 (lower is better) Translates to: FGVTVSHHPQMGPSS*RKTSSGLPLSLHYG Trigger: TCCATAATGTAGACTCAGTGGGAGCCCTGAGCTTGTTTTCCTGCAACTAGACGGTCCCATCTGAGGGTGATGGGAGACAGTGACACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556405.1 |
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| CDS TCA 90 bp | ATTATTAGTGAGCTGTTCCAATTTTGTAATTCCAGTCTCAAGGAATaGGCTCATCCAGTTTGGAGTTACCAGGTTAGCTGTATGCACTTG | + |
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Preference number: 5 (lower is better) Translates to: IISELFQFCNSSLKE*AHPVWSYQVSCMHL Trigger: CAAGTGCATACAGCTAACCTGGTAACTCCAAACTGGATGAGCTCATTCCTTGAGACTGGAATTACAAAATTGGAACAGCTCACTAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556405.1 |
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| CDS TCA 90 bp | ATTATTAGTGAGCTGTTCCAATTTTGTAATTCCAGTCTCAAGGAATaGGCTCATCCAGTTTGGAGTTACCAGGTTAGCTGTATGCACATC | + |
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Preference number: 5 (lower is better) Translates to: IISELFQFCNSSLKE*AHPVWSYQVSCMHI Trigger: GATGTGCATACAGCTAACCTGGTAACTCCAAACTGGATGAGCTCATTCCTTGAGACTGGAATTACAAAATTGGAACAGCTCACTAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665816.1 |
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| CDS CCA 90 bp | AAAGAGGTTGCTTTTGACTACCAGATCTCTTTAACAGGCCTTTTCTaGAATATAGTGAGAAGTTCAGACTGGAAGGCAGAAATCAAACAC | + |
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Preference number: 5 (lower is better) Translates to: KEVAFDYQISLTGLF*NIVRSSDWKAEIKH Trigger: GTGTTTGATTTCTGCCTTCCAGTCTGAACTTCTCACTATATTCCAGAAAAGGCCTGTTAAAGAGATCTGGTAGTCAAAAGCAACCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556405.1 ENST00000665816.1 |
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| CDS GCA 90 bp | TTTGTTGGGAATTTTGCTTCAACCACATCAAGAACTCACAGTGCATaGCATCATTCCTTTAGTCTTCATTATTCAAACAGTGTTCACGAC | + |
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Preference number: 5 (lower is better) Translates to: FVGNFASTTSRTHSA*HHSFSLHYSNSVHD Trigger: GTCGTGAACACTGTTTGAATAATGAAGACTAAAGGAATGATGGCATGCACTGTGAGTTCTTGATGTGGTTGAAGCAAAATTCCCAACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000556405.1 ENST00000665816.1 |
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| CDS GCA 72 bp | ACTGTCTCCCATCACCCTCAGATGGGACCGTCTAGTTaGAGGAAAACAAGCTCAGGGCTCCCACTGAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: TVSHHPQMGPSS*RKTSSGLPLSL Trigger: TAGACTCAGTGGGAGCCCTGAGCTTGTTTTCCTGCAACTAGACGGTCCCATCTGAGGGTGATGGGAGACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556405.1 |
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| CDS TCA 72 bp | TCGAGATCAGCTTGGGCAACATGGCAAAACCTCGTCTaGGTCCAAGAGTTGGAGACCAGTCTGGGCAACATA | + |
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Preference number: 6 (lower is better) Translates to: SRSAWATWQNLV*VQELETSLGNI Trigger: TATGTTGCCCAGACTGGTCTCCAACTCTTGGACTCAGACGAGGTTTTGCCATGTTGCCCAAGCTGATCTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556405.1 |
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| CDS CCA 72 bp | AGATTACGAAGTAGACTGGACATAAGCAGCACACTTTaGTGTCACTGTCTCCCATCACCCTCAGATGGGACC | + |
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Preference number: 6 (lower is better) Translates to: RLRSRLDISSTL*CHCLPSPSDGT Trigger: GGTCCCATCTGAGGGTGATGGGAGACAGTGACACCAAAGTGTGCTGCTTATGTCCAGTCTACTTCGTAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556405.1 |
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| CDS CAA 72 bp | TTGGGGAAGGACACTGCTTTGCGGGGAAGAAGAACATaGTTATGCCACATTTGGGTGATGGGTATGACTCCC | + |
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Preference number: 6 (lower is better) Translates to: LGKDTALRGRRT*LCHIWVMGMTP Trigger: GGGAGTCATACCCATCACCCAAATGTGGCATAACAATGTTCTTCTTCCCCGCAAAGCAGTGTCCTTCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556405.1 ENST00000665816.1 |
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| CDS CCA 72 bp | ACAGGCCTTTTCTGGAATATAGTGAGAAGTTCAGACTaGAAGGCAGAAATCAAACACAGTGAGGGGCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: TGLFWNIVRSSD*KAEIKHSEGQE Trigger: TTCTTGCCCCTCACTGTGTTTGATTTCTGCCTTCCAGTCTGAACTTCTCACTATATTCCAGAAAAGGCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556405.1 ENST00000665816.1 |
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| CDS CAA 90 bp | AGAATTTCTTTGGGGAAGGACACTGCTTTGCGGGGAAGAAGAACATaGTTATGCCACATTTGGGTGATGGGTATGACTCCCAAATTTCAT | + |
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Preference number: 6 (lower is better) Translates to: RISLGKDTALRGRRT*LCHIWVMGMTPKFH Trigger: ATGAAATTTGGGAGTCATACCCATCACCCAAATGTGGCATAACAATGTTCTTCTTCCCCGCAAAGCAGTGTCCTTCCCCAAAGAAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556405.1 ENST00000665816.1 |
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| CDS CAA 72 bp | GCAAGAAGTGGAAAGAGATCAAGAAGTCTTGGTAGGTaGGTCCTAAATTGTGACAAGTCTTCTGCGCTATGT | + |
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Preference number: 6 (lower is better) Translates to: ARSGKRSRSLGR*VLNCDKSSALC Trigger: ACATAGCGCAGAAGACTTGTCACAATTTAGGACCAACCTACCAAGACTTCTTGATCTCTTTCCACTTCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556405.1 ENST00000665816.1 |
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| CDS TCA 72 bp | CGTCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCACTaGGTCTACATTATGGAGTTGTATAACTATTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: RLVAGKQAQGSH*VYIMELYNYFV Trigger: AACAAAATAGTTATACAACTCCATAATGTAGACTCAGTGGGAGCCCTGAGCTTGTTTTCCTGCAACTAGACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556405.1 |
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| CDS TCA 72 bp | AATAAGATGATGTTGGTCAGAGTACAAACCTGCAGATaGAGTAAGTTCTGGAGACTTACTGTAAAGTATGAT | + |
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Preference number: 6 (lower is better) Translates to: NKMMLVRVQTCR*SKFWRLTVKYD Trigger: ATCATACTTTACAGTAAGTCTCCAGAACTTACTTCATCTGCAGGTTTGTACTCTGACCAACATCATCTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556405.1 ENST00000665816.1 |
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| CDS GCA 72 bp | AATTTTGCTTCAACCACATCAAGAACTCACAGTGCATaGCATCATTCCTTTAGTCTTCATTATTCAAACAGT | + |
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Preference number: 6 (lower is better) Translates to: NFASTTSRTHSA*HHSFSLHYSNS Trigger: ACTGTTTGAATAATGAAGACTAAAGGAATGATGGCATGCACTGTGAGTTCTTGATGTGGTTGAAGCAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000556405.1 ENST00000665816.1 |
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