Pregenerated sensors for LINC02301 (Homo sapiens)
Ensembl gene IDs: ENSG00000258743Ensembl transcript IDs: ENST00000553760.6, ENST00000555150.5, ENST00000555798.1, ENST00000656622.1, ENST00000657900.1, ENST00000658091.1, ENST00000661658.1, ENST00000662642.1, ENST00000667773.1, ENST00000669510.1, ENST00000670297.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCTGTTCGGTAGGGACACCGACAGTGGAGATAGAGGGGAGGTCCTaGTGCTTCTCTGCTCTCTCCTGCGCGCCTTTCACAACTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: PCSVGTPTVEIEGRS*CFSALSCAPFTTSG Trigger: GCCAGAAGTTGTGAAAGGCGCGCAGGAGAGAGCAGAGAAGCAGCAGGACCTCCCCTCTATCTCCACTGTCGGTGTCCCTACCGAACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS GCA 90 bp | TGTTCGGTAGGGACACCGACAGTGGAGATAGAGGGGAGGTCCTGCTaGTTCTCTGCTCTCTCCTGCGCGCCTTTCACAACTTCTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: CSVGTPTVEIEGRSC*FSALSCAPFTTSGC Trigger: GCAGCCAGAAGTTGTGAAAGGCGCGCAGGAGAGAGCAGAGAAGCAGCAGGACCTCCCCTCTATCTCCACTGTCGGTGTCCCTACCGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS GCA 90 bp | CCATCATCTTCATGTTTCACCCACGATCCCGCTCGTAGATCCTTCTaGCCAGAAAGCCCAGGATTTCAGCCCCTTCATATTCCTTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: PSSSCFTHDPARRSF*PESPGFQPLHIPSQ Trigger: TTGAGAAGGAATATGAAGGGGCTGAAATCCTGGGCTTTCTGGGCAGAAGGATCTACGAGCGGGATCGTGGGTGAAACATGAAGATGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555150.5 ENST00000656622.1 |
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| CDS TCA 90 bp | ATGTTGAGTTTCCTTTGTATAACCGGTTACTGCTGGCACCCAAGTTaGAAACTCTTACTGGCTTGTCCACATGGGACCTGGTTCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: MLSFLCITGYCWHPS*KLLLACPHGTWFFH Trigger: GTGGAAGAACCAGGTCCCATGTGGACAAGCCAGTAAGAGTTTTCAACTTGGGTGCCAGCAGTAACCGGTTATACAAAGGAAACTCAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS GCA 90 bp | GGGTACATGTGCACATTGTGCGGGTTAGTTACATATGTATACATGTaGCATGCTGGTGCACTGCACCCACTAACTCGTCATCTAGCATTA | + |
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Preference number: 5 (lower is better) Translates to: GYMCTLCGLVTYVYM*HAGALHPLTRHLAL Trigger: TAATGCTAGATGACGAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCCGCACAATGTGCACATGTACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS CCA 90 bp | AGGTGCTGGAGAGGATGTGGAGACATAGGAACACTTTTACACTGTTaGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: RCWRGCGDIGTLLHC*WDCKLVQPLWKSVW Trigger: CCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATGTCTCCACATCCTCTCCAGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS CCA 90 bp | GAAACTGCCTGTAAGCACTGTACTCTATTTGGTAAAGTAGCCTCCTaGCAAGCACTAGTTACCAACTTTGAAACTACTGCATATATGCCC | + |
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Preference number: 5 (lower is better) Translates to: ETACKHCTLFGKVAS*QALVTNFETTAYMP Trigger: GGGCATATATGCAGTAGTTTCAAAGTTGGTAACTAGTGCTTGCCAGGAGGCTACTTTACCAAATAGAGTACAGTGCTTACAGGCAGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555798.1 ENST00000670297.1 |
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| CDS CCA 90 bp | TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTaGAGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: CWWDCKLVQPLWKSV*RFLRDLELEIPFDP Trigger: TGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS TCA 90 bp | ATGGCAAATAATGGTGAAATTACACCTGTGTCTCTAGTAGATTATTaGAACAATCTCACCGAAGATGGTGAGGAGAGGAAGATGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: MANNGEITPVSLVDY*NNLTEDGEERKMLS Trigger: GCTCAGCATCTTCCTCTCCTCACCATCTTCGGTGAGATTGTTTCAATAATCTACTAGAGACACAGGTGTAATTTCACCATTATTTGCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555798.1 ENST00000670297.1 |
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| CDS TCA 90 bp | GCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATaGGATACCGTCTCACGCCAGTTAGAATGGCAATCATTAAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: AHHHWPSEKCKSKPQ*DTVSRQLEWQSLKS Trigger: ACTTTTTAATGATTGCCATTCTAACTGGCGTGAGACGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS GCA 90 bp | CCATCTTTGGTACCATTAAATCCATCCCATCTATCTGTCTCTCATTaGATTGCAAAACATTGCAGACTTAAAGATTTGCCTGAAGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: PSLVPLNPSHLSVSH*IAKHCRLKDLPEVR Trigger: CCGCACTTCAGGCAAATCTTTAAGTCTGCAATGTTTTGCAATGCAATGAGAGACAGATAGATGGGATGGATTTAATGGTACCAAAGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657900.1 ENST00000658091.1 ENST00000667773.1 |
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| CDS GCA 90 bp | TTTTATAGGACCCTAGGTGACCCTAAGCTAATTATCTCACTTGAGTaGCCATCATCGCCAAAGAAATCTCTTCTCCAATATCCTGACAAT | + |
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Preference number: 5 (lower is better) Translates to: FYRTLGDPKLIISLE*PSSPKKSLLQYPDN Trigger: ATTGTCAGGATATTGGAGAAGAGATTTCTTTGGCGATGATGGGCACTCAAGTGAGATAATTAGCTTAGGGTCACCTAGGGTCCTATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS CCA 90 bp | ACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTaGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: TLLHCWWDCKLVQPL*KSVWRFLRDLELEI Trigger: TATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS TCA 90 bp | GTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAAATACCATTTaGCCCAAAACCCATGTAACTTTAAAGCATAAGGGGGTAAACTTT | + |
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Preference number: 5 (lower is better) Translates to: VSVEIPQGSRTRNTI*PKTHVTLKHKGVNF Trigger: AAAGTTTACCCCCTTATGCTTTAAAGTTACATGGGTTTTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555798.1 ENST00000670297.1 |
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| CDS TCA 90 bp | TTAGAAACATTAGTTACAGTAAACCGCAAGGACAGTTTTGTAGGATaGTCCTTTAATAAGAGCATCTCCTCTTGCTCCTGCTTTCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LETLVTVNRKDSFVG*SFNKSISSCSCFPV Trigger: GACAGGAAAGCAGGAGCAAGAGGAGATGCTCTTATTAAAGGATCATCCTACAAAACTGTCCTTGCGGTTTACTGTAACTAATGTTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657900.1 ENST00000658091.1 ENST00000667773.1 |
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| CDS TCA 90 bp | ATTCCACTACAAAGCTTTGTGGTTACACTGTTAATATTGGTTACATaGGTCATGTTGGACAAAGGTTGCAGCACCCAGGATAACTTTTAC | + |
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Preference number: 5 (lower is better) Translates to: IPLQSFVVTLLILVT*VMLDKGCSTQDNFY Trigger: GTAAAAGTTATCCTGGGTGCTGCAACCTTTGTCCAACATGACTCATGTAACCAATATTAACAGTGTAACCACAAAGCTTTGTAGTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS CCA 90 bp | GATAGCCCCAGAGAAACATTTCCGTCCTTAGAAGTTAGTGCACTTTaGATTATCAGCTTGATCGTATCCTTACTTCAAATTCAATGGTAT | + |
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Preference number: 5 (lower is better) Translates to: DSPRETFPSLEVSAL*IISLIVSLLQIQWY Trigger: ATACCATTGAATTTGAAGTAAGGATACGATCAAGCTGATAATCCAAAGTGCACTAACTTCTAAGGACGGAAATGTTTCTCTGGGGCTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000553760.6 ENST00000658091.1 ENST00000661658.1 |
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| CDS CCA 90 bp | TTAAATAAAGGAACAGTGGATGGTGAGAGCCAAACTTCTCACTGTTaGAATAGGAATTTACAGATAAAGCAAGGGAAGGAGATAAGCATT | + |
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Preference number: 5 (lower is better) Translates to: LNKGTVDGESQTSHC*NRNLQIKQGKEISI Trigger: AATGCTTATCTCCTTCCCTTGCTTTATCTGTAAATTCCTATTCCAACAGTGAGAAGTTTGGCTCTCACCATCCACTGTTCCTTTATTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555798.1 ENST00000670297.1 |
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| CDS CCA 90 bp | GCACTTTGGATTATCAGCTTGATCGTATCCTTACTTCAAATTCAATaGTATGGATCTTATAAATCCTGGATCTCCATATATAAATGGCTC | + |
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Preference number: 5 (lower is better) Translates to: ALWIISLIVSLLQIQ*YGSYKSWISIYKWL Trigger: GAGCCATTTATATATGGAGATCCAGGATTTATAAGATCCATACCATTGAATTTGAAGTAAGGATACGATCAAGCTGATAATCCAAAGTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553760.6 ENST00000658091.1 ENST00000661658.1 |
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| CDS GCA 72 bp | ATAGAGGGGAGGTCCTGCTGCTTCTCTGCTCTCTCCTaGGCGCCTTTCACAACTTCTGGCTGCAGTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: IEGRSCCFSALS*APFTTSGCSVG Trigger: CCCCACACTGCAGCCAGAAGTTGTGAAAGGCGCGCAGGAGAGAGCAGAGAAGCAGCAGGACCTCCCCTCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS GCA 72 bp | GACAGTGGAGATAGAGGGGAGGTCCTGCTGCTTCTCTaGTCTCTCCTGCGCGCCTTTCACAACTTCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: DSGDRGEVLLLL*SLLRAFHNFWL Trigger: CAGCCAGAAGTTGTGAAAGGCGCGCAGGAGAGAGCAGAGAAGCAGCAGGACCTCCCCTCTATCTCCACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS CCA 72 bp | TTCTTATACAGCAGAGCGAGAAGGAAGCCTGTTTACTaGCTCCGGCCCCATCACACAGGAACGCAAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: FLYSRARRKPVY*LRPHHTGTQEA Trigger: AGCCTCTTGCGTTCCTGTGTGATGGGGCCGGAGCCAGTAAACAGGCTTCCTTCTCGCTCTGCTGTATAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553760.6 |
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| CDS GCA 72 bp | TCATGTTTCACCCACGATCCCGCTCGTAGATCCTTCTaGCCAGAAAGCCCAGGATTTCAGCCCCTTCATATT | + |
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Preference number: 6 (lower is better) Translates to: SCFTHDPARRSF*PESPGFQPLHI Trigger: AATATGAAGGGGCTGAAATCCTGGGCTTTCTGGGCAGAAGGATCTACGAGCGGGATCGTGGGTGAAACATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555150.5 ENST00000656622.1 |
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| CDS TCA 72 bp | TTCCTTTGTATAACCGGTTACTGCTGGCACCCAAGTTaGAAACTCTTACTGGCTTGTCCACATGGGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: FLCITGYCWHPS*KLLLACPHGTW Trigger: CCAGGTCCCATGTGGACAAGCCAGTAAGAGTTTTCAACTTGGGTGCCAGCAGTAACCGGTTATACAAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS GCA 72 bp | CATCATCTTCATGTTTCACCTGAGGCTGAAGCAAAATaGTGTCATACTAATGGCGTCCTGCCTGCCGATTCC | + |
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Preference number: 6 (lower is better) Translates to: HHLHVSPEAEAK*CHTNGVLPADS Trigger: GGAATCGGCAGGCAGGACGCCATTAGTATGACAGCATTTTGCTTCAGCCTCAGGTGAAACATGAAGATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669510.1 |
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| CDS CAA 72 bp | TGGTCTTCTTTGATGCAACTGGGCAAAGAGCCAGGATaGGAACTATTAGCTTTCACTGGGCCCAGGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: WSSLMQLGKEPG*ELLAFTGPRSV Trigger: AACTGACCTGGGCCCAGTGAAAGCTAATAGTTCCAATCCTGGCTCTTTGCCCAGTTGCATCAAAGAAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555150.5 |
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| CDS GCA 72 bp | TGCACATTGTGCGGGTTAGTTACATATGTATACATGTaGCATGCTGGTGCACTGCACCCACTAACTCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: CTLCGLVTYVYM*HAGALHPLTRH Trigger: ATGACGAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCCGCACAATGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS CAA 72 bp | TTTCCTTTGTATAACCGGTTACTGCTGGCACCCAAGTaGAAAACTCTTACTGGCTTGTCCACATGGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: FPLYNRLLLAPK*KTLTGLSTWDL Trigger: CAGGTCCCATGTGGACAAGCCAGTAAGAGTTTTCAACTTGGGTGCCAGCAGTAACCGGTTATACAAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS CAA 90 bp | AATGTTGAGTTTCCTTTGTATAACCGGTTACTGCTGGCACCCAAGTaGAAAACTCTTACTGGCTTGTCCACATGGGACCTGGTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: NVEFPLYNRLLLAPK*KTLTGLSTWDLVLP Trigger: TGGAAGAACCAGGTCCCATGTGGACAAGCCAGTAAGAGTTTTCAACTTGGGTGCCAGCAGTAACCGGTTATACAAAGGAAACTCAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS GCA 72 bp | CCATTTCTCAGGCCCCTGAGCATCGTTAAATACTCCTaGAGTGTTTATCTGCTGGGTTACCTTTTTATAGGA | + |
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Preference number: 6 (lower is better) Translates to: PFLRPLSIVKYS*SVYLLGYLFIG Trigger: TCCTATAAAAAGGTAACCCAGCAGATAAACACTGCAGGAGTATTTAACGATGCTCAGGGGCCTGAGAAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662642.1 |
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| CDS CAA 90 bp | GGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATaGTGGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GTLLHCWWDCKLVQP*WKSVWRFLRDLELE Trigger: TTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS TCA 72 bp | CCCAGTGTCCATATTTCAACAGCTGCTGGCTTTGTCTaGGAGGCAAATAATTGGAGGTACTTATGTATGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSVHISTAAGFV*EANNWRYLCMS Trigger: TGACATACATAAGTACCTCCAATTATTTGCCTCTCAGACAAAGCCAGCAGCTGTTGAAATATGGACACTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658091.1 |
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| CDS CCA 72 bp | GGATGTGGAGACATAGGAACACTTTTACACTGTTGGTaGGACTGTAAACTAGTTCAACCATTGTGGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GCGDIGTLLHCW*DCKLVQPLWKS Trigger: TGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATGTCTCCACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS CCA 72 bp | AGAGGATGTGGAGACATAGGAACACTTTTACACTGTTaGTGGGACTGTAAACTAGTTCAACCATTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RGCGDIGTLLHC*WDCKLVQPLWK Trigger: CTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATGTCTCCACATCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS TCA 72 bp | TTAGTTACAGTAAACCGCAAGGACAGTTTTGTAGGATaGTCCTTTAATAAGAGCATCTCCTCTTGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LVTVNRKDSFVG*SFNKSISSCSC Trigger: GCAGGAGCAAGAGGAGATGCTCTTATTAAAGGATCATCCTACAAAACTGTCCTTGCGGTTTACTGTAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657900.1 ENST00000658091.1 ENST00000667773.1 |
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| CDS CCA 72 bp | TGTAAGCACTGTACTCTATTTGGTAAAGTAGCCTCCTaGCAAGCACTAGTTACCAACTTTGAAACTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: CKHCTLFGKVAS*QALVTNFETTA Trigger: TGCAGTAGTTTCAAAGTTGGTAACTAGTGCTTGCCAGGAGGCTACTTTACCAAATAGAGTACAGTGCTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555798.1 ENST00000670297.1 |
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| CDS CCA 72 bp | GACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTaGAGATTCCTCAGGGATCTAGAACTAGAAATACCA | + |
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Preference number: 6 (lower is better) Translates to: DCKLVQPLWKSV*RFLRDLELEIP Trigger: TGGTATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670297.1 |
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| CDS CAA 72 bp | AGTAACCCAGTGTCCATATTTCAACAGCTGCTGGCTTaGTCTGAGAGGCAAATAATTGGAGGTACTTATGTA | + |
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Preference number: 6 (lower is better) Translates to: SNPVSIFQQLLA*SERQIIGGTYV Trigger: TACATAAGTACCTCCAATTATTTGCCTCTCAGACAAAGCCAGCAGCTGTTGAAATATGGACACTGGGTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658091.1 |
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| CDS CAA 90 bp | ATTATACGTAGTAACCCAGTGTCCATATTTCAACAGCTGCTGGCTTaGTCTGAGAGGCAAATAATTGGAGGTACTTATGTATGTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: IIRSNPVSIFQQLLA*SERQIIGGTYVCHG Trigger: ACCATGACATACATAAGTACCTCCAATTATTTGCCTCTCAGACAAAGCCAGCAGCTGTTGAAATATGGACACTGGGTTACTACGTATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658091.1 |
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| CDS TCA 72 bp | TCTAGTAGATTATTGAAACAATCTCACCGAAGATGGTaGGGAGAGGAAGATGCTGAGCTGAGTAACTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SSRLLKQSHRRW*GEEDAELSNFV Trigger: TACAAAGTTACTCAGCTCAGCATCTTCCTCTCCTCACCATCTTCGGTGAGATTGTTTCAATAATCTACTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555798.1 ENST00000670297.1 |
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| CDS TCA 72 bp | GAGATTCCTCAGGGATCTAGAACTAGAAATACCATTTaGCCCAAAACCCATGTAACTTTAAAGCATAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: EIPQGSRTRNTI*PKTHVTLKHKG Trigger: CCCCTTATGCTTTAAAGTTACATGGGTTTTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555798.1 ENST00000670297.1 |
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| CDS CCA 72 bp | TATGGATCTTATAAATCCTGGATCTCCATATATAAATaGCTCCATCTGACTCAGTATCTTCCTTCTCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: YGSYKSWISIYK*LHLTQYLPSQA Trigger: AGCCTGAGAAGGAAGATACTGAGTCAGATGGAGCCATTTATATATGGAGATCCAGGATTTATAAGATCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000553760.6 ENST00000657900.1 ENST00000658091.1 ENST00000661658.1 ENST00000667773.1 |
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| CDS CAA 72 bp | CCGTCCTTAGAAGTTAGTGCACTTTGGATTATCAGCTaGATCGTATCCTTACTTCAAATTCAATGGTATGGA | + |
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Preference number: 6 (lower is better) Translates to: PSLEVSALWIIS*IVSLLQIQWYG Trigger: TCCATACCATTGAATTTGAAGTAAGGATACGATCAAGCTGATAATCCAAAGTGCACTAACTTCTAAGGACGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553760.6 ENST00000658091.1 ENST00000661658.1 |
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| CDS TCA 72 bp | TTTTCTTACCATATTTCAACAGCTGCTGGCTTTGTCTaGGAGGCAAATAATTGGAGGTACTTATGTATGTCA | + |
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Preference number: 6 (lower is better) Translates to: FSYHISTAAGFV*EANNWRYLCMS Trigger: TGACATACATAAGTACCTCCAATTATTTGCCTCTCAGACAAAGCCAGCAGCTGTTGAAATATGGTAAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553760.6 ENST00000661658.1 |
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| CDS CAA 72 bp | TCTTATACAAATTATATTGTAGGAAAATCCTGGTTCTaGTCATATGGCCAGAAAAGATTAGACTCGCGGACA | + |
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Preference number: 6 (lower is better) Translates to: SYTNYIVGKSWF*SYGQKRLDSRT Trigger: TGTCCGCGAGTCTAATCTTTTCTGGCCATATGACAAGAACCAGGATTTTCCTACAATATAATTTGTATAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661658.1 |
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