Pregenerated sensors for LINC02298 (Homo sapiens)
Ensembl gene IDs: ENSG00000257556Ensembl transcript IDs: ENST00000546968.1, ENST00000548104.1, ENST00000548361.2, ENST00000655276.1, ENST00000659265.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGTGGGGGTTGGAGGAGATGGAGGCAGGCCCTGACGCCGGCTCCTaGCGCACCCTCCAGGCCCTCTCCATCGCGGCTTCGCGGCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: GWGLEEMEAGPDAGS*RTLQALSIAASRLR Trigger: CCGGAGCCGCGAAGCCGCGATGGAGAGGGCCTGGAGGGTGCGCCAGGAGCCGGCGTCAGGGCCTGCCTCCATCTCCTCCAACCCCCACCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS TCA 90 bp | GGCGGCTGCTCTCAGTCACTCTTCCATATCATCCTGGAAGTCCTGTaGGGAGCTTGTGTGCACGAGGGCAACCTCGCAGCAGCGACGCCC | + |
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Preference number: 5 (lower is better) Translates to: GGCSQSLFHIILEVL*GACVHEGNLAAATP Trigger: GGGCGTCGCTGCTGCGAGGTTGCCCTCGTGCACACAAGCTCCTCACAGGACTTCCAGGATGATATGGAAGAGTGACTGAGAGCAGCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS CCA 90 bp | GTGTGGACAACAGCTGGGCCCCCAGGGTGCAAGGCCGAGCTGGCATaGCATGCAGACCAACTAGTAGGATCTTCTTGCCAGCTCAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: VWTTAGPPGCKAELA*HADQLVGSSCQLRG Trigger: TCCCCTGAGCTGGCAAGAAGATCCTACTAGTTGGTCTGCATGCCATGCCAGCTCGGCCTTGCACCCTGGGGGCCCAGCTGTTGTCCACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548361.2 ENST00000655276.1 |
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| CDS GCA 90 bp | GACAACAGCTGGGCCCCCAGGGTGCAAGGCCGAGCTGGCATGGCATaGAGACCAACTAGTAGGATCTTCTTGCCAGCTCAGGGGACAATG | + |
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Preference number: 5 (lower is better) Translates to: DNSWAPRVQGRAGMA*RPTSRIFLPAQGTM Trigger: CATTGTCCCCTGAGCTGGCAAGAAGATCCTACTAGTTGGTCTGCATGCCATGCCAGCTCGGCCTTGCACCCTGGGGGCCCAGCTGTTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548361.2 ENST00000655276.1 |
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| CDS CCA 90 bp | GGGAAGCACCGGGCGGCTGCTCTCAGTCACTCTTCCATATCATCCTaGAAGTCCTGTGAGGAGCTTGTGTGCACGAGGGCAACCTCGCAG | + |
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Preference number: 5 (lower is better) Translates to: GKHRAAALSHSSISS*KSCEELVCTRATSQ Trigger: CTGCGAGGTTGCCCTCGTGCACACAAGCTCCTCACAGGACTTCCAGGATGATATGGAAGAGTGACTGAGAGCAGCCGCCCGGTGCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS GCA 90 bp | CTAGTTACCTGGGCCCCCAGGGTGCAAGGCCGAGCTGGCATGGCATaGAGACCAACTAGTAGGATCTTCTTGCCAGCTCAGGGGACAATG | + |
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Preference number: 5 (lower is better) Translates to: LVTWAPRVQGRAGMA*RPTSRIFLPAQGTM Trigger: CATTGTCCCCTGAGCTGGCAAGAAGATCCTACTAGTTGGTCTGCATGCCATGCCAGCTCGGCCTTGCACCCTGGGGGCCCAGGTAACTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546968.1 ENST00000659265.1 |
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| CDS CCA 90 bp | CTCCCTCCAGCCTCATCTTCCATGCTGAGGTTTGCACCTCCACTGTaGTGGAGCACAGCGGGCATTTCTCCCTGGTGCACCTTTGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LPPASSSMLRFAPPL*WSTAGISPWCTFAS Trigger: AGAAGCAAAGGTGCACCAGGGAGAAATGCCCGCTGTGCTCCACCACAGTGGAGGTGCAAACCTCAGCATGGAAGATGAGGCTGGAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS GCA 90 bp | AGTCACTCTTCCATATCATCCTGGAAGTCCTGTGAGGAGCTTGTGTaGACGAGGGCAACCTCGCAGCAGCGACGCCCACCACAGAATGCT | + |
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Preference number: 5 (lower is better) Translates to: SHSSISSWKSCEELV*TRATSQQRRPPQNA Trigger: AGCATTCTGTGGTGGGCGTCGCTGCTGCGAGGTTGCCCTCGTGCACACAAGCTCCTCACAGGACTTCCAGGATGATATGGAAGAGTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS CCA 90 bp | CCTCCAGCCTCATCTTCCATGCTGAGGTTTGCACCTCCACTGTGGTaGAGCACAGCGGGCATTTCTCCCTGGTGCACCTTTGCTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: PPASSSMLRFAPPLW*STAGISPWCTFASL Trigger: CAAAGAAGCAAAGGTGCACCAGGGAGAAATGCCCGCTGTGCTCCACCACAGTGGAGGTGCAAACCTCAGCATGGAAGATGAGGCTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS TCA 90 bp | GTGCACGAGGGCAACCTCGCAGCAGCGACGCCCACCACAGAATGCTaGTGGCTCAATCCCAGCAGAAGTTTATTTAGGGCACAGAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: VHEGNLAAATPTTEC*WLNPSRSLFRAQKA Trigger: AGCTTTCTGTGCCCTAAATAAACTTCTGCTGGGATTGAGCCATCAGCATTCTGTGGTGGGCGTCGCTGCTGCGAGGTTGCCCTCGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS GCA 90 bp | GCTGCCCAACCGTACCATTGCCATCTTAGGCTTCTCTTTCCATTCTaGCCTCTGAAGCAGGATGGCATTTCCCTCAGTCTTGCTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AAQPYHCHLRLLFPF*PLKQDGISLSLAAS Trigger: GGAGGCAGCAAGACTGAGGGAAATGCCATCCTGCTTCAGAGGGCAGAATGGAAAGAGAAGCCTAAGATGGCAATGGTACGGTTGGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS GCA 90 bp | AAGGCCGAGCTGGCATGGCATGCAGACCAACTAGTAGGATCTTCTTaGCAGCTCAGGGGACAATGCACACATGGAGAAGTGCAGTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: KAELAWHADQLVGSS*QLRGQCTHGEVQLD Trigger: ATCCAACTGCACTTCTCCATGTGTGCATTGTCCCCTGAGCTGGCAAGAAGATCCTACTAGTTGGTCTGCATGCCATGCCAGCTCGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS CCA 90 bp | AGCCCCCAGCACAGTGGCATTCACAGCACCCATATCCCAAACCTGTaGGGAACAGATAATCCACAGGATATGTCCGTTGTTCCAGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SPQHSGIHSTHIPNL*GTDNPQDMSVVPEK Trigger: CTTTTCTGGAACAACGGACATATCCTGTGGATTATCTGTTCCCCACAGGTTTGGGATATGGGTGCTGTGAATGCCACTGTGCTGGGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CCA 90 bp | ACGCTTTCTGATTGCACCTGTCAGCAAGTGTTTCTTGTATCTCGTTaGCCAGAATGGAGTCACATGACTGCTCCTAGCTGCAAGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: TLSDCTCQQVFLVSR*PEWSHMTAPSCKGG Trigger: GCCTCCCTTGCAGCTAGGAGCAGTCATGTGACTCCATTCTGGCCAACGAGATACAAGAAACACTTGCTGACAGGTGCAATCAGAAAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS GCA 90 bp | CTTGTATCTCGTTGGCCAGAATGGAGTCACATGACTGCTCCTAGCTaGAAGGGAGGCTGGGAAATAGAGCATTTAACTTCCAGGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: LVSRWPEWSHMTAPS*KGGWEIEHLTSRTL Trigger: CAGAGTCCTGGAAGTTAAATGCTCTATTTCCCAGCCTCCCTTGCAGCTAGGAGCAGTCATGTGACTCCATTCTGGCCAACGAGATACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CCA 90 bp | CCAACTAGTAGGATCTTCTTGCCAGCTCAGGGGACAATGCACACATaGAGAAGTGCAGTTGGATACCAGGCATCTGGGAAAATGCACATG | + |
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Preference number: 5 (lower is better) Translates to: PTSRIFLPAQGTMHT*RSAVGYQASGKMHM Trigger: CATGTGCATTTTCCCAGATGCCTGGTATCCAACTGCACTTCTCCATGTGTGCATTGTCCCCTGAGCTGGCAAGAAGATCCTACTAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS TCA 90 bp | GATGGCATTTCCCTCAGTCTTGCTGCCTCCTATTTGCAAGATGGCTaGCTCATCTCCAAACATGACGGCAATGCAATGTTCGAATCAAGA | + |
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Preference number: 5 (lower is better) Translates to: DGISLSLAASYLQDG*LISKHDGNAMFESR Trigger: TCTTGATTCGAACATTGCATTGCCGTCATGTTTGGAGATGAGTCAGCCATCTTGCAAATAGGAGGCAGCAAGACTGAGGGAAATGCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS TCA 90 bp | TCTTGCTGCCTCCTATTTGCAAGATGGCTGACTCATCTCCAAACATaGCGGCAATGCAATGTTCGAATCAAGAAGAAAGGGGAAATGCAA | + |
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Preference number: 5 (lower is better) Translates to: SCCLLFARWLTHLQT*RQCNVRIKKKGEMQ Trigger: TTGCATTTCCCCTTTCTTCTTGATTCGAACATTGCATTGCCGTCATGTTTGGAGATGAGTCAGCCATCTTGCAAATAGGAGGCAGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CCA 72 bp | TTGGAGGAGATGGAGGCAGGCCCTGACGCCGGCTCCTaGCGCACCCTCCAGGCCCTCTCCATCGCGGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LEEMEAGPDAGS*RTLQALSIAAS Trigger: CGAAGCCGCGATGGAGAGGGCCTGGAGGGTGCGCCAGGAGCCGGCGTCAGGGCCTGCCTCCATCTCCTCCAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS TCA 72 bp | CTGGGGGACAGAGGGGTCGGCACATGTAGGCTGAGCTaGGCTTTCGGGAGCGAGGAGGCCAGGCGCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LGDRGVGTCRLS*AFGSEEARRWE Trigger: CTCCCAGCGCCTGGCCTCCTCGCTCCCGAAAGCTCAGCTCAGCCTACATGTGCCGACCCCTCTGTCCCCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS TCA 72 bp | GAGACCCTGTGGCCAGCATCGCAGGGAGACTGCCCGTaGCCTCCCTCTAAGGTTGGGAAGCACCGGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: ETLWPASQGDCP*PPSKVGKHRAA Trigger: AGCCGCCCGGTGCTTCCCAACCTTAGAGGGAGGTCACGGGCAGTCTCCCTGCGATGCTGGCCACAGGGTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 |
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| CDS CCA 72 bp | GCTTTCGGGAGCGAGGAGGCCAGGCGCTGGGAGTGGTaGCCTTGCTGTAGGCTGAAGACACAGCTCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AFGSEEARRWEW*PCCRLKTQLAA Trigger: AGCTGCGAGCTGTGTCTTCAGCCTACAGCAAGGCCACCACTCCCAGCGCCTGGCCTCCTCGCTCCCGAAAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CCA 72 bp | TCCATGCTTGCGGTGATCAGGAGGGTGGCACGGCCCTaGGGTTACAGCCGGCGGAGGGGCTTCCCAAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SMLAVIRRVARP*GYSRRRGFPKE Trigger: TTCTTTTGGGAAGCCCCTCCGCCGGCTGTAACCCCAGGGCCGTGCCACCCTCCTGATCACCGCAAGCATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548104.1 |
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| CDS CAA 72 bp | AGTCCCAAGGTCCTCACTTCCCTCTGTAGGCCACCCTaGGTGTGGACAACAGCCCGGGACGCCCAACCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SPKVLTSLCRPP*VWTTARDAQPS Trigger: GCTTGGTTGGGCGTCCCGGGCTGTTGTCCACACCAAGGGTGGCCTACAGAGGGAAGTGAGGACCTTGGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548104.1 |
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| CDS CAA 90 bp | CCTGGAGGAAGTCCCAAGGTCCTCACTTCCCTCTGTAGGCCACCCTaGGTGTGGACAACAGCTGCAGACAGGAGACACGGAGGGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: PGGSPKVLTSLCRPP*VWTTAADRRHGGGT Trigger: TGTGCCCCCTCCGTGTCTCCTGTCTGCAGCTGTTGTCCACACCAAGGGTGGCCTACAGAGGGAAGTGAGGACCTTGGGACTTCCTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546968.1 ENST00000659265.1 |
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| CDS GCA 72 bp | TGGGCCCCCAGGGTGCAAGGCCGAGCTGGCATGGCATaGAGACCAACTAGTAGGATCTTCTTGCCAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: WAPRVQGRAGMA*RPTSRIFLPAQ Trigger: CTGAGCTGGCAAGAAGATCCTACTAGTTGGTCTGCATGCCATGCCAGCTCGGCCTTGCACCCTGGGGGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS GCA 72 bp | GCCCCTCCCTCCAGCCTCATCTTCCATGCTGAGGTTTaGACCTCCACTGTGGTGGAGCACAGCGGGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: APPSSLIFHAEV*TSTVVEHSGHF Trigger: GAAATGCCCGCTGTGCTCCACCACAGTGGAGGTGCAAACCTCAGCATGGAAGATGAGGCTGGAGGGAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS GCA 72 bp | TCCATATCATCCTGGAAGTCCTGTGAGGAGCTTGTGTaGACGAGGGCAACCTCGCAGCAGCGACGCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: SISSWKSCEELV*TRATSQQRRPP Trigger: TGGTGGGCGTCGCTGCTGCGAGGTTGCCCTCGTGCACACAAGCTCCTCACAGGACTTCCAGGATGATATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS CCA 72 bp | TTACCTGGGCCCCCAGGGTGCAAGGCCGAGCTGGCATaGCATGCAGACCAACTAGTAGGATCTTCTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPGPPGCKAELA*HADQLVGSSCQ Trigger: CTGGCAAGAAGATCCTACTAGTTGGTCTGCATGCCATGCCAGCTCGGCCTTGCACCCTGGGGGCCCAGGTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546968.1 ENST00000659265.1 |
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| CDS CAA 90 bp | CTCTCAGTCACTCTTCCATATCATCCTGGAAGTCCTGTGAGGAGCTaGTGTGCACGAGGGCAACCTCGCAGCAGCGACGCCCACCACAGA | + |
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Preference number: 6 (lower is better) Translates to: LSVTLPYHPGSPVRS*CARGQPRSSDAHHR Trigger: TCTGTGGTGGGCGTCGCTGCTGCGAGGTTGCCCTCGTGCACACAAGCTCCTCACAGGACTTCCAGGATGATATGGAAGAGTGACTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS CCA 72 bp | CGGGCGGCTGCTCTCAGTCACTCTTCCATATCATCCTaGAAGTCCTGTGAGGAGCTTGTGTGCACGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RAAALSHSSISS*KSCEELVCTRA Trigger: TGCCCTCGTGCACACAAGCTCCTCACAGGACTTCCAGGATGATATGGAAGAGTGACTGAGAGCAGCCGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS CAA 72 bp | ACTCTTCCATATCATCCTGGAAGTCCTGTGAGGAGCTaGTGTGCACGAGGGCAACCTCGCAGCAGCGACGCC | + |
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Preference number: 6 (lower is better) Translates to: TLPYHPGSPVRS*CARGQPRSSDA Trigger: GGCGTCGCTGCTGCGAGGTTGCCCTCGTGCACACAAGCTCCTCACAGGACTTCCAGGATGATATGGAAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS TCA 72 bp | GCCTCAGGTGATGTCCATCACATCTCTTTCTGTTGGTaGGAGCTAGTTACCTGGGCCCCCAGGGTGCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ASGDVHHISFCW*ELVTWAPRVQG Trigger: GCCTTGCACCCTGGGGGCCCAGGTAACTAGCTCTCACCAACAGAAAGAGATGTGATGGACATCACCTGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546968.1 ENST00000659265.1 |
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| CDS GCA 72 bp | GGCCCCAGTCCTGACTCAGCTGCCCAACCGTACCATTaGCATCTTAGGCTTCTCTTTCCATTCTGCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GPSPDSAAQPYH*HLRLLFPFCPL Trigger: CAGAGGGCAGAATGGAAAGAGAAGCCTAAGATGGCAATGGTACGGTTGGGCAGCTGAGTCAGGACTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS TCA 72 bp | GGCAACCTCGCAGCAGCGACGCCCACCACAGAATGCTaGTGGCTCAATCCCAGCAGAAGTTTATTTAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GNLAAATPTTEC*WLNPSRSLFRA Trigger: TGCCCTAAATAAACTTCTGCTGGGATTGAGCCATCAGCATTCTGTGGTGGGCGTCGCTGCTGCGAGGTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS GCA 72 bp | GTGAGCATCTCGTGTGTCCCCAGCGCACAGCTGCTGTaGCAGCTCCCGGTAGGGATTTGTTACAGGAATAAA | + |
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Preference number: 6 (lower is better) Translates to: VSISCVPSAQLL*QLPVGICYRNK Trigger: TTTATTCCTGTAACAAATCCCTACCGGGAGCTGGCACAGCAGCTGTGCGCTGGGGACACACGAGATGCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CCA 72 bp | TCATCTTCCATGCTGAGGTTTGCACCTCCACTGTGGTaGAGCACAGCGGGCATTTCTCCCTGGTGCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: SSSMLRFAPPLW*STAGISPWCTF Trigger: AAAGGTGCACCAGGGAGAAATGCCCGCTGTGCTCCACCACAGTGGAGGTGCAAACCTCAGCATGGAAGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CAA 90 bp | CAAGGCCGAGCTGGCATGGCATGCAGACCAACTAGTAGGATCTTCTaGCCAGCTCAGGGGACAATGCACACATGGAGAAGTGCAGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QGRAGMACRPTSRIF*PAQGTMHTWRSAVG Trigger: TCCAACTGCACTTCTCCATGTGTGCATTGTCCCCTGAGCTGGCAAGAAGATCCTACTAGTTGGTCTGCATGCCATGCCAGCTCGGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS TCA 72 bp | TCTCAGTCACTCTTCCATATCATCCTGGAAGTCCTGTaGGGAGCTTGTGTGCACGAGGGCAACCTCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SQSLFHIILEVL*GACVHEGNLAA Trigger: TGCTGCGAGGTTGCCCTCGTGCACACAAGCTCCTCACAGGACTTCCAGGATGATATGGAAGAGTGACTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS TCA 72 bp | AGGGGGCACACAGAGGTCTTAGGGTCTGGCCTCAGGTaGTGTCCATCACATCTCTTTCTGTTGGTGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RGHTEVLGSGLR*CPSHLFLLVRA Trigger: AGCTCTCACCAACAGAAAGAGATGTGATGGACATCACCTGAGGCCAGACCCTAAGACCTCTGTGTGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546968.1 ENST00000659265.1 |
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| CDS GCA 72 bp | CTGGCATGGCATGCAGACCAACTAGTAGGATCTTCTTaGCAGCTCAGGGGACAATGCACACATGGAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LAWHADQLVGSS*QLRGQCTHGEV Trigger: CACTTCTCCATGTGTGCATTGTCCCCTGAGCTGGCAAGAAGATCCTACTAGTTGGTCTGCATGCCATGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS GCA 72 bp | CTGCCCTCTGAAGCAGGATGGCATTTCCCTCAGTCTTaGTGCCTCCTATTTGCAAGATGGCTGACTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: LPSEAGWHFPQS*CLLFARWLTHL Trigger: GAGATGAGTCAGCCATCTTGCAAATAGGAGGCAGCAAGACTGAGGGAAATGCCATCCTGCTTCAGAGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CCA 72 bp | AAAACAAACACACACTTCCCAAAGCCCCCAGCACAGTaGCATTCACAGCACCCATATCCCAAACCTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: KTNTHFPKPPAQ*HSQHPYPKPVG Trigger: CCCCACAGGTTTGGGATATGGGTGCTGTGAATGCCACTGTGCTGGGGGCTTTGGGAAGTGTGTGTTTGTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CAA 72 bp | GCTGGCATGGCATGCAGACCAACTAGTAGGATCTTCTaGCCAGCTCAGGGGACAATGCACACATGGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: AGMACRPTSRIF*PAQGTMHTWRS Trigger: ACTTCTCCATGTGTGCATTGTCCCCTGAGCTGGCAAGAAGATCCTACTAGTTGGTCTGCATGCCATGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS GCA 72 bp | CTTGCCAGCTCAGGGGACAATGCACACATGGAGAAGTaGAGTTGGATACCAGGCATCTGGGAAAATGCACAT | + |
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Preference number: 6 (lower is better) Translates to: LASSGDNAHMEK*SWIPGIWENAH Trigger: ATGTGCATTTTCCCAGATGCCTGGTATCCAACTGCACTTCTCCATGTGTGCATTGTCCCCTGAGCTGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS GCA 72 bp | CGTTGGCCAGAATGGAGTCACATGACTGCTCCTAGCTaGAAGGGAGGCTGGGAAATAGAGCATTTAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: RWPEWSHMTAPS*KGGWEIEHLTS Trigger: GGAAGTTAAATGCTCTATTTCCCAGCCTCCCTTGCAGCTAGGAGCAGTCATGTGACTCCATTCTGGCCAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS GCA 72 bp | CCCTCTGAAGCAGGATGGCATTTCCCTCAGTCTTGCTaGCTCCTATTTGCAAGATGGCTGACTCATCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: PSEAGWHFPQSC*LLFARWLTHLQ Trigger: TTGGAGATGAGTCAGCCATCTTGCAAATAGGAGGCAGCAAGACTGAGGGAAATGCCATCCTGCTTCAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CCA 72 bp | AGCTCAGGGGACAATGCACACATGGAGAAGTGCAGTTaGATACCAGGCATCTGGGAAAATGCACATGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SSGDNAHMEKCS*IPGIWENAHAH Trigger: GTGAGCATGTGCATTTTCCCAGATGCCTGGTATCCAACTGCACTTCTCCATGTGTGCATTGTCCCCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS CCA 72 bp | TGTCAGCAAGTGTTTCTTGTATCTCGTTGGCCAGAATaGAGTCACATGACTGCTCCTAGCTGCAAGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CQQVFLVSRWPE*SHMTAPSCKGG Trigger: GCCTCCCTTGCAGCTAGGAGCAGTCATGTGACTCCATTCTGGCCAACGAGATACAAGAAACACTTGCTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CAA 72 bp | CAGCTCAGGGGACAATGCACACATGGAGAAGTGCAGTaGGATACCAGGCATCTGGGAAAATGCACATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QLRGQCTHGEVQ*DTRHLGKCTCS Trigger: TGAGCATGTGCATTTTCCCAGATGCCTGGTATCCAACTGCACTTCTCCATGTGTGCATTGTCCCCTGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS GCA 72 bp | CAACTAGTAGGATCTTCTTGCCAGCTCAGGGGACAATaGACACATGGAGAAGTGCAGTTGGATACCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: QLVGSSCQLRGQ*THGEVQLDTRH Trigger: ATGCCTGGTATCCAACTGCACTTCTCCATGTGTGCATTGTCCCCTGAGCTGGCAAGAAGATCCTACTAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS GCA 72 bp | AGGATGGCATTTCCCTCAGTCTTGCTGCCTCCTATTTaGAAGATGGCTGACTCATCTCCAAACATGACGGCA | + |
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Preference number: 6 (lower is better) Translates to: RMAFPSVLLPPI*KMADSSPNMTA Trigger: TGCCGTCATGTTTGGAGATGAGTCAGCCATCTTGCAAATAGGAGGCAGCAAGACTGAGGGAAATGCCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CCA 72 bp | CACAGTGGCATTCACAGCACCCATATCCCAAACCTGTaGGGAACAGATAATCCACAGGATATGTCCGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: HSGIHSTHIPNL*GTDNPQDMSVV Trigger: AACAACGGACATATCCTGTGGATTATCTGTTCCCCACAGGTTTGGGATATGGGTGCTGTGAATGCCACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS CCA 72 bp | GGGAAATGCAAAAAGGTGACTGGTCCTACATGTTACTaGAAAAGCAAACGCTTTCTGATTGCACCTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: GKCKKVTGPTCY*KSKRFLIAPVS Trigger: GCTGACAGGTGCAATCAGAAAGCGTTTGCTTTTCCAGTAACATGTAGGACCAGTCACCTTTTTGCATTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS TCA 72 bp | CTCCTATTTGCAAGATGGCTGACTCATCTCCAAACATaGCGGCAATGCAATGTTCGAATCAAGAAGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LLFARWLTHLQT*RQCNVRIKKKG Trigger: CCCTTTCTTCTTGATTCGAACATTGCATTGCCGTCATGTTTGGAGATGAGTCAGCCATCTTGCAAATAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS GCA 72 bp | GTGCAGTTGGATACCAGGCATCTGGGAAAATGCACATaGTCACTCTTTTTCAAAGAAATGCAGGTTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: VQLDTRHLGKCT*SLFFKEMQVPK Trigger: TTTTGGAACCTGCATTTCTTTGAAAAAGAGTGAGCATGTGCATTTTCCCAGATGCCTGGTATCCAACTGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000546968.1 ENST00000548361.2 ENST00000655276.1 ENST00000659265.1 |
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| CDS CCA 72 bp | CATAAGAAATTGGTAATTGGGAGTTCAAGACAAGCCTaGCCAAATGGTGAAACCCCATCTTTACTAAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: HKKLVIGSSRQA*PNGETPSLLKV Trigger: TACTTTTAGTAAAGATGGGGTTTCACCATTTGGCCAGGCTTGTCTTGAACTCCCAATTACCAATTTCTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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| CDS TCA 72 bp | AAACAAACAAACAAAAACAAACAAAACAGTGGTGGGTaGCTCACTTTACTAGGTTGGTCGTACTTAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: KQTNKNKQNSGG*LTLLGWSYLES Trigger: ACTTTCTAAGTACGACCAACCTAGTAAAGTGAGTCACCCACCACTGTTTTGTTTGTTTTTGTTTGTTTGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655276.1 |
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