Pregenerated sensors for LINC02294 (Homo sapiens)
Ensembl gene IDs: ENSG00000257845Ensembl transcript IDs: ENST00000549330.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | CAGAAACCTATTACGGGATTCGATACAAGTAGTGTAAATGGGGCATaGAGGCTTCAGTGTATATATAGAATTGGAGATGCTTTCACTTTC | + |
Preference number: 5 (lower is better) Translates to: QKPITGFDTSSVNGA*RLQCIYRIGDAFTF Trigger: GAAAGTGAAAGCATCTCCAATTCTATATATACACTGAAGCCTTCATGCCCCATTTACACTACTTGTATCGAATCCCGTAATAGGTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549330.1 |
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CDS CCA 72 bp | TATTCTTGGTATTCACAGCCTAAACTGTCATGCAGATaGAATACACTTTGCTTTCTTGGTGATCGAAGACTC | + |
Preference number: 6 (lower is better) Translates to: YSWYSQPKLSCR*NTLCFLGDRRL Trigger: GAGTCTTCGATCACCAAGAAAGCAAAGTGTATTCCATCTGCATGACAGTTTAGGCTGTGAATACCAAGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549330.1 |
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CDS GCA 72 bp | ACATTATATTCTTGGTATTCACAGCCTAAACTGTCATaGAGATGGAATACACTTTGCTTTCTTGGTGATCGA | + |
Preference number: 6 (lower is better) Translates to: TLYSWYSQPKLS*RWNTLCFLGDR Trigger: TCGATCACCAAGAAAGCAAAGTGTATTCCATCTGCATGACAGTTTAGGCTGTGAATACCAAGAATATAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549330.1 |