Pregenerated sensors for LINC02293 (Homo sapiens)
Ensembl gene IDs: ENSG00000257185Ensembl transcript IDs: ENST00000548335.1, ENST00000548385.1, ENST00000653199.1, ENST00000660737.1, ENST00000661868.1, ENST00000662232.1, ENST00000662892.1, ENST00000664061.1, ENST00000671365.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCACTGTTTTGAAGCCAGTGGACTCTGAAGTTGGTCGGCCTGGTTaGAAACTTCACCTTGGCTGCTCCCTGGCAGGCCAACATCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: STVLKPVDSEVGRPG*KLHLGCSLAGQHPF Trigger: AAACGGATGTTGGCCTGCCAGGGAGCAGCCAAGGTGAAGTTTTCAACCAGGCCGACCAACTTCAGAGTCCACTGGCTTCAAAACAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000548335.1 ENST00000653199.1 ENST00000661868.1 ENST00000662232.1 ENST00000662892.1 ENST00000671365.1 |
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| CDS TCA 90 bp | TGTTGGAAGGAGGATGTAAAGCACTGTTTTGAAGCCAGTGGACTCTaGAGTTGGTCGGCCTGGTTGAAAACTTCACCTTGGCTGCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: CWKEDVKHCFEASGL*SWSAWLKTSPWLLP Trigger: AGGGAGCAGCCAAGGTGAAGTTTTCAACCAGGCCGACCAACTTCAGAGTCCACTGGCTTCAAAACAGTGCTTTACATCCTCCTTCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000548335.1 ENST00000653199.1 ENST00000661868.1 ENST00000662232.1 ENST00000662892.1 ENST00000664061.1 ENST00000671365.1 |
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| CDS GCA 90 bp | ATTCCACTGGATTGTCACAGACTTCCCTCATCTGTCCAATTGTTCTaGTCACAGCATTCAGGAAACTCTGCTCGCCATCTCTCTTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: IPLDCHRLPSSVQLF*SQHSGNSARHLSCS Trigger: TGAACAAGAGAGATGGCGAGCAGAGTTTCCTGAATGCTGTGAGCAGAACAATTGGACAGATGAGGGAAGTCTGTGACAATCCAGTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548385.1 |
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| CDS GCA 90 bp | TCCCTCATCTGTCCAATTGTTCTGCTCACAGCATTCAGGAAACTCTaGTCGCCATCTCTCTTGTTCAGTTATGTCATTCTTCCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLICPIVLLTAFRKL*SPSLLFSYVILPLS Trigger: AGAGAGAGGAAGAATGACATAACTGAACAAGAGAGATGGCGAGCAGAGTTTCCTGAATGCTGTGAGCAGAACAATTGGACAGATGAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548385.1 |
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| CDS GCA 90 bp | CTCTGGGTCAATAGGATGAAGAGTGTGTGGTTAAAAATCAGATATTaGAAATGTATACAGCTTGAGTCAGGATGCCTGTTGGGGGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: LWVNRMKSVWLKIRY*KCIQLESGCLLGVK Trigger: TTTTACCCCCAACAGGCATCCTGACTCAAGCTGTATACATTTGCAATATCTGATTTTTAACCACACACTCTTCATCCTATTGACCCAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000662892.1 ENST00000664061.1 ENST00000671365.1 |
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| CDS CCA 90 bp | AATACAGGTTTCTATGATCATCACTCTGTGAGTTTGCAGGTTAGCTaGGGGTATCTATCTTGTAGATTAAGTCCAGGTCAGTTCCATATG | + |
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Preference number: 5 (lower is better) Translates to: NTGFYDHHSVSLQVS*GYLSCRLSPGQFHM Trigger: CATATGGAACTGACCTGGACTTAATCTACAAGATAGATACCCCCAGCTAACCTGCAAACTCACAGAGTGATGATCATAGAAACCTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548385.1 |
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| CDS CCA 90 bp | AAGCATTATTTTCTCACTCATCACTCTGTGAGTTTGCAGGTTAGCTaGGGGTATCTATCTTGTAGATTAAGTCCAGGTCAGTTCCATATG | + |
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Preference number: 5 (lower is better) Translates to: KHYFLTHHSVSLQVS*GYLSCRLSPGQFHM Trigger: CATATGGAACTGACCTGGACTTAATCTACAAGATAGATACCCCCAGCTAACCTGCAAACTCACAGAGTGATGAGTGAGAAAATAATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653199.1 ENST00000660737.1 |
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| CDS CAA 90 bp | AGCCAGTGGACTCTGAAGTTGGTCGGCCTGGTTGAAAACTTCACCTaGGCTGCTCCCTGGCAGGCCAACATCCGTTTTAGGACACCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SQWTLKLVGLVENFT*AAPWQANIRFRTPR Trigger: CCTTGGTGTCCTAAAACGGATGTTGGCCTGCCAGGGAGCAGCCAAGGTGAAGTTTTCAACCAGGCCGACCAACTTCAGAGTCCACTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000653199.1 ENST00000661868.1 ENST00000662232.1 ENST00000662892.1 ENST00000671365.1 |
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| CDS TCA 72 bp | TTGAAGCCAGTGGACTCTGAAGTTGGTCGGCCTGGTTaGAAACTTCACCTTGGCTGCTCCCTGGCAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LKPVDSEVGRPG*KLHLGCSLAGQ Trigger: TTGGCCTGCCAGGGAGCAGCCAAGGTGAAGTTTTCAACCAGGCCGACCAACTTCAGAGTCCACTGGCTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000548335.1 ENST00000653199.1 ENST00000661868.1 ENST00000662232.1 ENST00000662892.1 ENST00000671365.1 |
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| CDS CAA 72 bp | ACTCTGAAGTTGGTCGGCCTGGTTGAAAACTTCACCTaGGCTGCTCCCTGGCAGGCCAACATCCGTTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: TLKLVGLVENFT*AAPWQANIRFR Trigger: CCTAAAACGGATGTTGGCCTGCCAGGGAGCAGCCAAGGTGAAGTTTTCAACCAGGCCGACCAACTTCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000653199.1 ENST00000661868.1 ENST00000662232.1 ENST00000662892.1 ENST00000671365.1 |
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| CDS CAA 90 bp | TGCGTGATTCCACTGGATTGTCACAGACTTCCCTCATCTGTCCAATaGTTCTGCTCACAGCATTCAGGAAACTCTGCTCGCCATCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CVIPLDCHRLPSSVQ*FCSQHSGNSARHLS Trigger: AGAGAGATGGCGAGCAGAGTTTCCTGAATGCTGTGAGCAGAACAATTGGACAGATGAGGGAAGTCTGTGACAATCCAGTGGAATCACGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548385.1 |
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| CDS TCA 72 bp | GAGGATGTAAAGCACTGTTTTGAAGCCAGTGGACTCTaGAGTTGGTCGGCCTGGTTGAAAACTTCACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: EDVKHCFEASGL*SWSAWLKTSPW Trigger: CCAAGGTGAAGTTTTCAACCAGGCCGACCAACTTCAGAGTCCACTGGCTTCAAAACAGTGCTTTACATCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000548335.1 ENST00000653199.1 ENST00000661868.1 ENST00000662232.1 ENST00000662892.1 ENST00000664061.1 ENST00000671365.1 |
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| CDS GCA 72 bp | GATTGTCACAGACTTCCCTCATCTGTCCAATTGTTCTaGTCACAGCATTCAGGAAACTCTGCTCGCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: DCHRLPSSVQLF*SQHSGNSARHL Trigger: GAGATGGCGAGCAGAGTTTCCTGAATGCTGTGAGCAGAACAATTGGACAGATGAGGGAAGTCTGTGACAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548385.1 |
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| CDS CCA 72 bp | TTTCTCACTCATCACTCTGTGAGTTTGCAGGTTAGCTaGGGGTATCTATCTTGTAGATTAAGTCCAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: FLTHHSVSLQVS*GYLSCRLSPGQ Trigger: CTGACCTGGACTTAATCTACAAGATAGATACCCCCAGCTAACCTGCAAACTCACAGAGTGATGAGTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653199.1 ENST00000660737.1 |
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| CDS CAA 72 bp | GAGCTTTACTTAAACACACTGCGTGATTCCACTGGATaGTCACAGACTTCCCTCATCTGTCCAATTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ELYLNTLRDSTG*SQTSLICPIVL Trigger: CAGAACAATTGGACAGATGAGGGAAGTCTGTGACAATCCAGTGGAATCACGCAGTGTGTTTAAGTAAAGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548385.1 |
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| CDS CAA 90 bp | ATTGTTCTGCTCACAGCATTCAGGAAACTCTGCTCGCCATCTCTCTaGTTCAGTTATGTCATTCTTCCTCTCTCTTCTTGTTCAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: IVLLTAFRKLCSPSL*FSYVILPLSSCSKA Trigger: AGCCTTTGAACAAGAAGAGAGAGGAAGAATGACATAACTGAACAAGAGAGATGGCGAGCAGAGTTTCCTGAATGCTGTGAGCAGAACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548385.1 |
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| CDS TCA 72 bp | CACACACTTGTGACTCTCTCAGTCTTGATCGGCTTGTaGATAATGTTGGAAGGAGGATGTAAAGCACTGTTT | + |
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Preference number: 6 (lower is better) Translates to: HTLVTLSVLIGL*IMLEGGCKALF Trigger: AAACAGTGCTTTACATCCTCCTTCCAACATTATTCACAAGCCGATCAAGACTGAGAGAGTCACAAGTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000548335.1 ENST00000653199.1 ENST00000661868.1 ENST00000662232.1 ENST00000662892.1 ENST00000664061.1 ENST00000671365.1 |
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| CDS CCA 72 bp | TTCTATGATCATCACTCTGTGAGTTTGCAGGTTAGCTaGGGGTATCTATCTTGTAGATTAAGTCCAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: FYDHHSVSLQVS*GYLSCRLSPGQ Trigger: CTGACCTGGACTTAATCTACAAGATAGATACCCCCAGCTAACCTGCAAACTCACAGAGTGATGATCATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548385.1 |
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| CDS CAA 90 bp | GCACAGAAGAAGAAGCATTATTTTCTCACTCATCACTCTGTGAGTTaGCAGGTTAGCTGGGGGTATCTATCTTGTAGATTAAGTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AQKKKHYFLTHHSVS*QVSWGYLSCRLSPG Trigger: ACCTGGACTTAATCTACAAGATAGATACCCCCAGCTAACCTGCAAACTCACAGAGTGATGAGTGAGAAAATAATGCTTCTTCTTCTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000653199.1 ENST00000660737.1 |
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| CDS CAA 90 bp | AAGATTCTGTGTCCATGCTATGTGATTTATCCACTTAAGCTCCTTTaGTGTTTATCTTTCTCCTCTGGGAGGTGGAAATGGTGTTACTTG | + |
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Preference number: 6 (lower is better) Translates to: KILCPCYVIYPLKLL*CLSFSSGRWKWCYL Trigger: CAAGTAACACCATTTCCACCTCCCAGAGGAGAAAGATAAACACAAAAGGAGCTTAAGTGGATAAATCACATAGCATGGACACAGAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664061.1 |
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| CDS TCA 72 bp | AGAAGAAGAAGCATTATTTTCTCACTCATCACTCTGTaGGTTTGCAGGTTAGCTGGGGGTATCTATCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: RRRSIIFSLITL*VCRLAGGIYLV Trigger: TACAAGATAGATACCCCCAGCTAACCTGCAAACTCACAGAGTGATGAGTGAGAAAATAATGCTTCTTCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000653199.1 ENST00000660737.1 |
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| CDS CAA 72 bp | TTATCTTTCTCCTCTGGGAGGTGGAAATGGTGTTACTaGCTATTGGCCAGAGTTTTAAGAGGCATAGATAAT | + |
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Preference number: 6 (lower is better) Translates to: LSFSSGRWKWCY*LLARVLRGIDN Trigger: ATTATCTATGCCTCTTAAAACTCTGGCCAATAGCAAGTAACACCATTTCCACCTCCCAGAGGAGAAAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664061.1 |
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| CDS CAA 90 bp | GCCTGGTTGAAAACTTCACCTTGGCTGCTCCCTAAACACATGACATaGTGTAAAATACTTCAATGGTTAAGCCTCACTTTCTTCATAAAA | + |
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Preference number: 6 (lower is better) Translates to: AWLKTSPWLLPKHMT*CKILQWLSLTFFIK Trigger: TTTTATGAAGAAAGTGAGGCTTAACCATTGAAGTATTTTACACAATGTCATGTGTTTAGGGAGCAGCCAAGGTGAAGTTTTCAACCAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664061.1 |
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| CDS CAA 72 bp | CTTAATACAGGTTTCTATGATCATCACTCTGTGAGTTaGCAGGTTAGCTGGGGGTATCTATCTTGTAGATTA | + |
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Preference number: 6 (lower is better) Translates to: LNTGFYDHHSVS*QVSWGYLSCRL Trigger: TAATCTACAAGATAGATACCCCCAGCTAACCTGCAAACTCACAGAGTGATGATCATAGAAACCTGTATTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548385.1 |
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| CDS CAA 72 bp | TTCTCCTCTGGGAGGTGGAAATGGTGTTACTTGCTATaGGCCAGAGTTTTAAGAGGCATAGATAATAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: FSSGRWKWCYLL*ARVLRGIDNKN Trigger: ATTTTTATTATCTATGCCTCTTAAAACTCTGGCCAATAGCAAGTAACACCATTTCCACCTCCCAGAGGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664061.1 |
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| CDS CAA 90 bp | TGTTTATCTTTCTCCTCTGGGAGGTGGAAATGGTGTTACTTGCTATaGGCCAGAGTTTTAAGAGGCATAGATAATAAAAATATCATACTA | + |
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Preference number: 6 (lower is better) Translates to: CLSFSSGRWKWCYLL*ARVLRGIDNKNIIL Trigger: TAGTATGATATTTTTATTATCTATGCCTCTTAAAACTCTGGCCAATAGCAAGTAACACCATTTCCACCTCCCAGAGGAGAAAGATAAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664061.1 |
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