Pregenerated sensors for LINC02289 (Homo sapiens)
Ensembl gene IDs: ENSG00000258819Ensembl transcript IDs: ENST00000555512.1, ENST00000556781.1, ENST00000557526.1, ENST00000658895.1, ENST00000660008.1, ENST00000660156.1, ENST00000660476.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGGCAAAGCGCTCTGGGACGGGTCGGCCCCGCTCACGTGGGTGTaGAGCCCCAGGGCAGTGGAACAGTGCAGAATCCTCGCTCCACTG | + |
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Preference number: 5 (lower is better) Translates to: EGKALWDGSAPLTWV*SPRAVEQCRILAPL Trigger: CAGTGGAGCGAGGATTCTGCACTGTTCCACTGCCCTGGGGCTGCACACCCACGTGAGCGGGGCCGACCCGTCCCAGAGCGCTTTGCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CCA 90 bp | GCATTGCTCCTGCAGGTGATGCTGCCTTCTGAGGGCAAAGCGCTCTaGGACGGGTCGGCCCCGCTCACGTGGGTGTGCAGCCCCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: ALLLQVMLPSEGKAL*DGSAPLTWVCSPRA Trigger: TGCCCTGGGGCTGCACACCCACGTGAGCGGGGCCGACCCGTCCCAGAGCGCTTTGCCCTCAGAAGGCAGCATCACCTGCAGGAGCAATGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CCA 90 bp | CCTTCTGAGGGCAAAGCGCTCTGGGACGGGTCGGCCCCGCTCACGTaGGTGTGCAGCCCCAGGGCAGTGGAACAGTGCAGAATCCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: PSEGKALWDGSAPLT*VCSPRAVEQCRILA Trigger: AGCGAGGATTCTGCACTGTTCCACTGCCCTGGGGCTGCACACCCACGTGAGCGGGGCCGACCCGTCCCAGAGCGCTTTGCCCTCAGAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS TCA 90 bp | CCCTGGAGGACAAGCCAGAGCTGTCCATGGCATTGCTCCTGCAGGTaGTGCTGCCTTCTGAGGGCAAAGCGCTCTGGGACGGGTCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: PWRTSQSCPWHCSCR*CCLLRAKRSGTGRP Trigger: GGGCCGACCCGTCCCAGAGCGCTTTGCCCTCAGAAGGCAGCATCACCTGCAGGAGCAATGCCATGGACAGCTCTGGCTTGTCCTCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS GCA 90 bp | TCGGCCCCGCTCACGTGGGTGTGCAGCCCCAGGGCAGTGGAACAGTaGAGAATCCTCGCTCCACTGCTGAGGTTACTATGGGCAACATCT | + |
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Preference number: 5 (lower is better) Translates to: SAPLTWVCSPRAVEQ*RILAPLLRLLWATS Trigger: AGATGTTGCCCATAGTAACCTCAGCAGTGGAGCGAGGATTCTGCACTGTTCCACTGCCCTGGGGCTGCACACCCACGTGAGCGGGGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CCA 90 bp | TCTAAGATGGCACGCTCACATGGCCAGCAAGATGGTGCTGGCTACTaGCAGGAGGCCTCAGTTCCTTGCCATGTGGACCTCTCCATGGAC | + |
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Preference number: 5 (lower is better) Translates to: SKMARSHGQQDGAGY*QEASVPCHVDLSMD Trigger: GTCCATGGAGAGGTCCACATGGCAAGGAACTGAGGCCTCCTGCCAGTAGCCAGCACCATCTTGCTGGCCATGTGAGCGTGCCATCTTAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS CCA 90 bp | AAGATGGTGCTGGCTACTGGCAGGAGGCCTCAGTTCCTTGCCATGTaGACCTCTCCATGGACCTCCCTGAGTAGCTTCATGACATGGCAG | + |
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Preference number: 5 (lower is better) Translates to: KMVLATGRRPQFLAM*TSPWTSLSSFMTWQ Trigger: CTGCCATGTCATGAAGCTACTCAGGGAGGTCCATGGAGAGGTCCACATGGCAAGGAACTGAGGCCTCCTGCCAGTAGCCAGCACCATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS TCA 90 bp | GACTGTGCCAGGAGGGACTGCATTAGGATGAGTGAAGGGGCTGTGTaGGTTCTTCCCATGGGCCACATGTGGATCAGATGGACCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: DCARRDCIRMSEGAV*VLPMGHMWIRWTMA Trigger: TGCCATGGTCCATCTGATCCACATGTGGCCCATGGGAAGAACTCACACAGCCCCTTCACTCATCCTAATGCAGTCCCTCCTGGCACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556781.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS TCA 90 bp | CTACAAGGGTCGGCCCTGTTCACGGAGGGAGGAGACACAATGATGTaGATACCAGGAGATGGGGACAATGAGGGGCCATTGTGGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LQGSALFTEGGDTMM*IPGDGDNEGPLWKQ Trigger: CTGCTTCCACAATGGCCCCTCATTGTCCCCATCTCCTGGTATTCACATCATTGTGTCTCCTCCCTCCGTGAACAGGGCCGACCCTTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000556781.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS TCA 90 bp | AGTGGCTACAAGGGTCGGCCCTGTTCACGGAGGGAGGAGACACAATaGTGTGAATACCAGGAGATGGGGACAATGAGGGGCCATTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SGYKGRPCSRREETQ*CEYQEMGTMRGHCG Trigger: TCCACAATGGCCCCTCATTGTCCCCATCTCCTGGTATTCACATCATTGTGTCTCCTCCCTCCGTGAACAGGGCCGACCCTTGTAGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000556781.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS CCA 90 bp | GAGTCAGAAGACCACGGTGTTCTTCCAGCTCTGAGCCCAACCATCTaGGTCACCTTAGCTGAGCTGCTCCTTCATGTCCCCAACCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: ESEDHGVLPALSPTI*VTLAELLLHVPNPS Trigger: AGAAGGGTTGGGGACATGAAGGAGCAGCTCAGCTAAGGTGACCCAGATGGTTGGGCTCAGAGCTGGAAGAACACCGTGGTCTTCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS TCA 90 bp | ACTGGCACTTCCTGGGCATCTACTATGTACGTGCCCTCACAGACGTaGTCTCACCCCTCATTACACACCTCCCATGGTACGGATGATGCC | + |
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Preference number: 5 (lower is better) Translates to: TGTSWASTMYVPSQT*SHPSLHTSHGTDDA Trigger: GGCATCATCCGTACCATGGGAGGTGTGTAATGAGGGGTGAGATCACGTCTGTGAGGGCACGTACATAGTAGATGCCCAGGAAGTGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CCA 90 bp | CGTGGTGTCCTGGAAACGTCTCTGGATAGAAACACTGGTATCTTCTaGAAGCGTCTTCTCCTCCCCGTGCGGTACATTGCTCAGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: RGVLETSLDRNTGIF*KRLLLPVRYIAQTP Trigger: TGGAGTCTGAGCAATGTACCGCACGGGGAGGAGAAGACGCTTCCAGAAGATACCAGTGTTTCTATCCAGAGACGTTTCCAGGACACCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS GCA 90 bp | TGGATAGAAACACTGGTATCTTCTGGAAGCGTCTTCTCCTCCCCGTaGGGTACATTGCTCAGACTCCATAGAAGGCCAGCTCTCCTAGAG | + |
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Preference number: 5 (lower is better) Translates to: WIETLVSSGSVFSSP*GTLLRLHRRPALLE Trigger: CTCTAGGAGAGCTGGCCTTCTATGGAGTCTGAGCAATGTACCGCACGGGGAGGAGAAGACGCTTCCAGAAGATACCAGTGTTTCTATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CCA 90 bp | GTACTCAGTCGAAGCGTGATTGATAGTGACATCAGATCTGTTGGCTaGGAGAATCAAGAAGCATGGCCTCAGCATCTGCTCAGCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VLSRSVIDSDIRSVG*ENQEAWPQHLLSLW Trigger: CCAGAGGCTGAGCAGATGCTGAGGCCATGCTTCTTGATTCTCCCAGCCAACAGATCTGATGTCACTATCAATCACGCTTCGACTGAGTAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557526.1 |
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| CDS CCA 90 bp | CTTCTAGTGTCTCTGCTGCTTAACGTGGTGTCCTGGAAACGTCTCTaGATAGAAACACTGGTATCTTCTGGAAGCGTCTTCTCCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: LLVSLLLNVVSWKRL*IETLVSSGSVFSSP Trigger: CGGGGAGGAGAAGACGCTTCCAGAAGATACCAGTGTTTCTATCCAGAGACGTTTCCAGGACACCACGTTAAGCAGCAGAGACACTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS GCA 90 bp | AACAAAAGCTCCTGTTCTTGGCAAGCCTCTTACAAGCAGGACAGATaGAGGAATTGGGAGTCAGAAGACCACGGTGTTCTTCCAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: NKSSCSWQASYKQDR*RNWESEDHGVLPAL Trigger: CAGAGCTGGAAGAACACCGTGGTCTTCTGACTCCCAATTCCTGCATCTGTCCTGCTTGTAAGAGGCTTGCCAAGAACAGGAGCTTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS TCA 90 bp | TCCAAGTCCCTGAGTATCCTGGTTTGGCTGTACTCAGTCGAAGCGTaGTTGATAGTGACATCAGATCTGTTGGCTGGGAGAATCAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SKSLSILVWLYSVEA*LIVTSDLLAGRIKK Trigger: CTTCTTGATTCTCCCAGCCAACAGATCTGATGTCACTATCAATCACGCTTCGACTGAGTACAGCCAAACCAGGATACTCAGGGACTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557526.1 |
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| CDS TCA 90 bp | TTGTCAGCAGGGTCAGAACGGTGGCACATGGAAGGTGCTCATTGGTaGAACAATGAGTGGGAAAGAATAAATCATTCCTTGCCTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LSAGSERWHMEGAHW*NNEWERINHSLPLP Trigger: TGGAAGAGGCAAGGAATGATTTATTCTTTCCCACTCATTGTTTCACCAATGAGCACCTTCCATGTGCCACCGTTCTGACCCTGCTGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS CCA 90 bp | AAGCAAATTGAGTTACATGTTGGTTCCACCCCACATTCAAGGGATTaGTTTCACCGAATCCCCGCCTCCACAGGGAATTGGGTCTTATAT | + |
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Preference number: 5 (lower is better) Translates to: KQIELHVGSTPHSRD*FHRIPASTGNWVLY Trigger: ATATAAGACCCAATTCCCTGTGGAGGCGGGGATTCGGTGAAACCAATCCCTTGAATGTGGGGTGGAACCAACATGTAACTCAATTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000555512.1 ENST00000658895.1 ENST00000660476.1 |
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| CDS TCA 90 bp | GAGCCAATAGCATCAATGCAAGTGAAGTATATTTATCTGTTGGCCTaGAAACATGTCCTAGTATATTGTCCCATTAAGCAAAAAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: EPIASMQVKYIYLLA*KHVLVYCPIKQKAG Trigger: ACCTGCTTTTTGCTTAATGGGACAATATACTAGGACATGTTTTCAGGCCAACAGATAAATATACTTCACTTGCATTGATGCTATTGGCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660008.1 |
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| CDS CCA 72 bp | GGCAAAGCGCTCTGGGACGGGTCGGCCCCGCTCACGTaGGTGTGCAGCCCCAGGGCAGTGGAACAGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GKALWDGSAPLT*VCSPRAVEQCR Trigger: TCTGCACTGTTCCACTGCCCTGGGGCTGCACACCCACGTGAGCGGGGCCGACCCGTCCCAGAGCGCTTTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CAA 90 bp | GACCATGCCAGGGCCCTGGAGGACAAGCCAGAGCTGTCCATGGCATaGCTCCTGCAGGTGATGCTGCCTTCTGAGGGCAAAGCGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: DHARALEDKPELSMA*LLQVMLPSEGKALW Trigger: CCAGAGCGCTTTGCCCTCAGAAGGCAGCATCACCTGCAGGAGCAATGCCATGGACAGCTCTGGCTTGTCCTCCAGGGCCCTGGCATGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS TCA 72 bp | ACAAGCCAGAGCTGTCCATGGCATTGCTCCTGCAGGTaGTGCTGCCTTCTGAGGGCAAAGCGCTCTGGGACG | + |
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Preference number: 6 (lower is better) Translates to: TSQSCPWHCSCR*CCLLRAKRSGT Trigger: CGTCCCAGAGCGCTTTGCCCTCAGAAGGCAGCATCACCTGCAGGAGCAATGCCATGGACAGCTCTGGCTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS GCA 72 bp | CTCACGTGGGTGTGCAGCCCCAGGGCAGTGGAACAGTaGAGAATCCTCGCTCCACTGCTGAGGTTACTATGG | + |
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Preference number: 6 (lower is better) Translates to: LTWVCSPRAVEQ*RILAPLLRLLW Trigger: CCATAGTAACCTCAGCAGTGGAGCGAGGATTCTGCACTGTTCCACTGCCCTGGGGCTGCACACCCACGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CAA 72 bp | AGGGCCCTGGAGGACAAGCCAGAGCTGTCCATGGCATaGCTCCTGCAGGTGATGCTGCCTTCTGAGGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RALEDKPELSMA*LLQVMLPSEGK Trigger: TTTGCCCTCAGAAGGCAGCATCACCTGCAGGAGCAATGCCATGGACAGCTCTGGCTTGTCCTCCAGGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS TCA 72 bp | CAAGAAGCATGGCCTCAGCATCTGCTCAGCCTCTGGTaGGGGCTAAGCATGACCAGAAGAGCCTCGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QEAWPQHLLSLW*GLSMTRRASGS Trigger: TGACCCCGAGGCTCTTCTGGTCATGCTTAGCCCTCACCAGAGGCTGAGCAGATGCTGAGGCCATGCTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557526.1 |
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| CDS CCA 72 bp | GACCACGGTGTTCTTCCAGCTCTGAGCCCAACCATCTaGGTCACCTTAGCTGAGCTGCTCCTTCATGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: DHGVLPALSPTI*VTLAELLLHVP Trigger: GGGGACATGAAGGAGCAGCTCAGCTAAGGTGACCCAGATGGTTGGGCTCAGAGCTGGAAGAACACCGTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CCA 72 bp | CTGGCTACTGGCAGGAGGCCTCAGTTCCTTGCCATGTaGACCTCTCCATGGACCTCCCTGAGTAGCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: LATGRRPQFLAM*TSPWTSLSSFM Trigger: CATGAAGCTACTCAGGGAGGTCCATGGAGAGGTCCACATGGCAAGGAACTGAGGCCTCCTGCCAGTAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS TCA 72 bp | AAGGGTCGGCCCTGTTCACGGAGGGAGGAGACACAATaGTGTGAATACCAGGAGATGGGGACAATGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: KGRPCSRREETQ*CEYQEMGTMRG Trigger: GCCCCTCATTGTCCCCATCTCCTGGTATTCACATCATTGTGTCTCCTCCCTCCGTGAACAGGGCCGACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000556781.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS CCA 72 bp | AGGAGGCCTCAGTTCCTTGCCATGTGGACCTCTCCATaGACCTCCCTGAGTAGCTTCATGACATGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RRPQFLAMWTSP*TSLSSFMTWQL Trigger: CAGCTGCCATGTCATGAAGCTACTCAGGGAGGTCCATGGAGAGGTCCACATGGCAAGGAACTGAGGCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS TCA 72 bp | TCGGCCCTGTTCACGGAGGGAGGAGACACAATGATGTaGATACCAGGAGATGGGGACAATGAGGGGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: SALFTEGGDTMM*IPGDGDNEGPL Trigger: CAATGGCCCCTCATTGTCCCCATCTCCTGGTATTCACATCATTGTGTCTCCTCCCTCCGTGAACAGGGCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000556781.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS CAA 72 bp | TCTTCTGGAAGCGTCTTCTCCTCCCCGTGCGGTACATaGCTCAGACTCCATAGAAGGCCAGCTCTCCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSGSVFSSPCGT*LRLHRRPALLE Trigger: CTCTAGGAGAGCTGGCCTTCTATGGAGTCTGAGCAATGTACCGCACGGGGAGGAGAAGACGCTTCCAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS TCA 72 bp | AGGAGGGACTGCATTAGGATGAGTGAAGGGGCTGTGTaGGTTCTTCCCATGGGCCACATGTGGATCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: RRDCIRMSEGAV*VLPMGHMWIRW Trigger: CCATCTGATCCACATGTGGCCCATGGGAAGAACTCACACAGCCCCTTCACTCATCCTAATGCAGTCCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556781.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS TCA 72 bp | TCCTGGGCATCTACTATGTACGTGCCCTCACAGACGTaGTCTCACCCCTCATTACACACCTCCCATGGTACG | + |
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Preference number: 6 (lower is better) Translates to: SWASTMYVPSQT*SHPSLHTSHGT Trigger: CGTACCATGGGAGGTGTGTAATGAGGGGTGAGATCACGTCTGTGAGGGCACGTACATAGTAGATGCCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS GCA 72 bp | ACACTGGTATCTTCTGGAAGCGTCTTCTCCTCCCCGTaGGGTACATTGCTCAGACTCCATAGAAGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TLVSSGSVFSSP*GTLLRLHRRPA Trigger: AGCTGGCCTTCTATGGAGTCTGAGCAATGTACCGCACGGGGAGGAGAAGACGCTTCCAGAAGATACCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CAA 90 bp | ACACTGGTATCTTCTGGAAGCGTCTTCTCCTCCCCGTGCGGTACATaGCTCAGACTCCATAGAAGGCCAGCTCTCCTAGAGCCACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TLVSSGSVFSSPCGT*LRLHRRPALLEPQK Trigger: TTTCTGTGGCTCTAGGAGAGCTGGCCTTCTATGGAGTCTGAGCAATGTACCGCACGGGGAGGAGAAGACGCTTCCAGAAGATACCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CCA 72 bp | TGTCACGCCGACCCCATCTTCAAATCACACTCCCTGTaGTGGCCATCCCTAGAGACCTACAAACAAAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: CHADPIFKSHSL*WPSLETYKQKL Trigger: GAGCTTTTGTTTGTAGGTCTCTAGGGATGGCCACCACAGGGAGTGTGATTTGAAGATGGGGTCGGCGTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CCA 72 bp | GAGTTACATGTTGGTTCCACCCCACATTCAAGGGATTaGTTTCACCGAATCCCCGCCTCCACAGGGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: ELHVGSTPHSRD*FHRIPASTGNW Trigger: CCAATTCCCTGTGGAGGCGGGGATTCGGTGAAACCAATCCCTTGAATGTGGGGTGGAACCAACATGTAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000555512.1 ENST00000658895.1 ENST00000660476.1 |
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| CDS CAA 72 bp | TTTCACAGTTCTGGGGGCCAGAAGTCTGAAACCACATaGTCAGCAGGGTCAGAACGGTGGCACATGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: FHSSGGQKSETT*SAGSERWHMEG Trigger: ACCTTCCATGTGCCACCGTTCTGACCCTGCTGACAATGTGGTTTCAGACTTCTGGCCCCCAGAACTGTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS CCA 72 bp | CTGGAAACGTCTCTGGATAGAAACACTGGTATCTTCTaGAAGCGTCTTCTCCTCCCCGTGCGGTACATTGCT | + |
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Preference number: 6 (lower is better) Translates to: LETSLDRNTGIF*KRLLLPVRYIA Trigger: AGCAATGTACCGCACGGGGAGGAGAAGACGCTTCCAGAAGATACCAGTGTTTCTATCCAGAGACGTTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CCA 72 bp | CTTCATGACATGGCAGCTGACTTCTCCCAGAATGAGTaGTTCAAGAGAGCAGGGAGGAGGTCACAATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LHDMAADFSQNE*FKRAGRRSQCL Trigger: GAGACATTGTGACCTCCTCCCTGCTCTCTTGAACCACTCATTCTGGGAGAAGTCAGCTGCCATGTCATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS CCA 72 bp | ACCTCTCCATGGACCTCCCTGAGTAGCTTCATGACATaGCAGCTGACTTCTCCCAGAATGAGTGGTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: TSPWTSLSSFMT*QLTSPRMSGSR Trigger: TCTTGAACCACTCATTCTGGGAGAAGTCAGCTGCCATGTCATGAAGCTACTCAGGGAGGTCCATGGAGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS CCA 72 bp | CGAAGCGTGATTGATAGTGACATCAGATCTGTTGGCTaGGAGAATCAAGAAGCATGGCCTCAGCATCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RSVIDSDIRSVG*ENQEAWPQHLL Trigger: GAGCAGATGCTGAGGCCATGCTTCTTGATTCTCCCAGCCAACAGATCTGATGTCACTATCAATCACGCTTCG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557526.1 |
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| CDS TCA 72 bp | CTGAGTATCCTGGTTTGGCTGTACTCAGTCGAAGCGTaGTTGATAGTGACATCAGATCTGTTGGCTGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LSILVWLYSVEA*LIVTSDLLAGR Trigger: TCTCCCAGCCAACAGATCTGATGTCACTATCAATCACGCTTCGACTGAGTACAGCCAAACCAGGATACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557526.1 |
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| CDS CCA 72 bp | TCTCTGCTGCTTAACGTGGTGTCCTGGAAACGTCTCTaGATAGAAACACTGGTATCTTCTGGAAGCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLLLNVVSWKRL*IETLVSSGSVF Trigger: GAAGACGCTTCCAGAAGATACCAGTGTTTCTATCCAGAGACGTTTCCAGGACACCACGTTAAGCAGCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CAA 72 bp | CCATCCCTAGAGACCTACAAACAAAAGCTCCTGTTCTaGGCAAGCCTCTTACAAGCAGGACAGATGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PSLETYKQKLLF*ASLLQAGQMQE Trigger: TTCCTGCATCTGTCCTGCTTGTAAGAGGCTTGCCAAGAACAGGAGCTTTTGTTTGTAGGTCTCTAGGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557526.1 ENST00000660008.1 |
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| CDS CAA 90 bp | TTAGCTCAAATGCACAGTGAGAGCCAAAGCAAATTGAGTTACATGTaGGTTCCACCCCACATTCAAGGGATTGGTTTCACCGAATCCCCG | + |
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Preference number: 6 (lower is better) Translates to: LAQMHSESQSKLSYM*VPPHIQGIGFTESP Trigger: CGGGGATTCGGTGAAACCAATCCCTTGAATGTGGGGTGGAACCAACATGTAACTCAATTTGCTTTGGCTCTCACTGTGCATTTGAGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000555512.1 ENST00000658895.1 ENST00000660476.1 |
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| CDS CAA 90 bp | GCTTCCCTTGCTTTAGCTCAAATGCACAGTGAGAGCCAAAGCAAATaGAGTTACATGTTGGTTCCACCCCACATTCAAGGGATTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ASLALAQMHSESQSK*SYMLVPPHIQGIGF Trigger: GAAACCAATCCCTTGAATGTGGGGTGGAACCAACATGTAACTCAATTTGCTTTGGCTCTCACTGTGCATTTGAGCTAAAGCAAGGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555512.1 ENST00000658895.1 ENST00000660476.1 |
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| CDS TCA 72 bp | CATATCTTCTGGGGGACATCATTAAACACACAACAATaGCCTAGCCTCAGAAGATGCATGCCATCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HIFWGTSLNTQQ*PSLRRCMPSAL Trigger: CAGAGCTGATGGCATGCATCTTCTGAGGCTAGGTCATTGTTGTGTGTTTAATGATGTCCCCCAGAAGATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000556781.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS TCA 72 bp | ACGGTGGCACATGGAAGGTGCTCATTGGTGAAACAATaGGTGGGAAAGAATAAATCATTCCTTGCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TVAHGRCSLVKQ*VGKNKSFLASS Trigger: GGAAGAGGCAAGGAATGATTTATTCTTTCCCACTCATTGTTTCACCAATGAGCACCTTCCATGTGCCACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS TCA 72 bp | GGGTCAGAACGGTGGCACATGGAAGGTGCTCATTGGTaGAACAATGAGTGGGAAAGAATAAATCATTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GSERWHMEGAHW*NNEWERINHSL Trigger: CAAGGAATGATTTATTCTTTCCCACTCATTGTTTCACCAATGAGCACCTTCCATGTGCCACCGTTCTGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658895.1 ENST00000660156.1 ENST00000660476.1 |
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| CDS CAA 72 bp | ATGCACAGTGAGAGCCAAAGCAAATTGAGTTACATGTaGGTTCCACCCCACATTCAAGGGATTGGTTTCACC | + |
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Preference number: 6 (lower is better) Translates to: MHSESQSKLSYM*VPPHIQGIGFT Trigger: GGTGAAACCAATCCCTTGAATGTGGGGTGGAACCAACATGTAACTCAATTTGCTTTGGCTCTCACTGTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555512.1 ENST00000658895.1 ENST00000660476.1 |
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| CDS TCA 72 bp | GGGAAATGCTTCCCTTGCTTTAGCTCAAATGCACAGTaGGAGCCAAAGCAAATTGAGTTACATGTTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GKCFPCFSSNAQ*EPKQIELHVGS Trigger: GGAACCAACATGTAACTCAATTTGCTTTGGCTCTCACTGTGCATTTGAGCTAAAGCAAGGGAAGCATTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000555512.1 ENST00000658895.1 ENST00000660476.1 |
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