Pregenerated sensors for LINC02287 (Homo sapiens)
Ensembl gene IDs: ENSG00000258499Ensembl transcript IDs: ENST00000555299.1, ENST00000630965.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCAGGGACACCATGTCCCTCAGCTCAGGGCATGCCGATAGGTTCTaGGAGGCTCCTGGAAGCACACTCAGTGCTTTGCAAAGAAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: GRDTMSLSSGHADRF*EAPGSTLSALQRKR Trigger: GCGCTTTCTTTGCAAAGCACTGAGTGTGCTTCCAGGAGCCTCCCAGAACCTATCGGCATGCCCTGAGCTGAGGGACATGGTGTCCCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS GCA 90 bp | CTCAAGGCTCAAGGCCTCCTGCCTCAGCTTGTCCCTTCTCTGGTTTaGAGAGTCTCAGGAGAACATAAAGTAGAAGGACAAGCAAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LKAQGLLPQLVPSLV*RVSGEHKVEGQARG Trigger: TCCCCTTGCTTGTCCTTCTACTTTATGTTCTCCTGAGACTCTGCAAACCAGAGAAGGGACAAGCTGAGGCAGGAGGCCTTGAGCCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS GCA 90 bp | TCCGCACACGTGAGGGATCATAGGGTGGCTTGCGTAACAAGGAGTTaGAGAGAGAATCTGAACTTGGATCACTGCTGGGGAAAGCATCTC | + |
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Preference number: 5 (lower is better) Translates to: SAHVRDHRVACVTRS*RENLNLDHCWGKHL Trigger: GAGATGCTTTCCCCAGCAGTGATCCAAGTTCAGATTCTCTCTGCAACTCCTTGTTACGCAAGCCACCCTATGATCCCTCACGTGTGCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS TCA 90 bp | GGCTGCCTGGGTTCAAGGCCTATATTTGCCCCTGTCTACTTTCTGTaGCCTTGGATGAGTGACTTGCTCTTGGGAGGCTTCAGTGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: GCLGSRPIFAPVYFL*PWMSDLLLGGFSVL Trigger: AAGAACACTGAAGCCTCCCAAGAGCAAGTCACTCATCCAAGGTCACAGAAAGTAGACAGGGGCAAATATAGGCCTTGAACCCAGGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS TCA 90 bp | GTTCAAGGCCTATATTTGCCCCTGTCTACTTTCTGTGACCTTGGATaGGTGACTTGCTCTTGGGAGGCTTCAGTGTTCTTCTTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VQGLYLPLSTFCDLG*VTCSWEASVFFLGK Trigger: CTTCCCCAAGAAGAACACTGAAGCCTCCCAAGAGCAAGTCACTCATCCAAGGTCACAGAAAGTAGACAGGGGCAAATATAGGCCTTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS GCA 72 bp | ACAGGGGTGGTCACTGAGACCCAGCTGGTGCCAGGATaGATACCCAGGTCCGTCCACACACAAAGCCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: TGVVTETQLVPG*IPRSVHTQSLR Trigger: ACGCAGGCTTTGTGTGTGGACGGACCTGGGTATGCATCCTGGCACCAGCTGGGTCTCAGTGACCACCCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS TCA 72 bp | GGACCGTTGTTACCCCCATTTCACAGGGGTGGTCACTaGGACCCAGCTGGTGCCAGGATGCATACCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: GPLLPPFHRGGH*DPAGARMHTQV Trigger: GACCTGGGTATGCATCCTGGCACCAGCTGGGTCTCAGTGACCACCCCTGTGAAATGGGGGTAACAACGGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS GCA 72 bp | CAGGATGCATACCCAGGTCCGTCCACACACAAAGCCTaGGTTCATTCAGCTTTTCCAGGATCCCACGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: QDAYPGPSTHKA*VHSAFPGSHAS Trigger: GCTGGCGTGGGATCCTGGAAAAGCTGAATGAACGCAGGCTTTGTGTGTGGACGGACCTGGGTATGCATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS CCA 72 bp | ACCATGTCCCTCAGCTCAGGGCATGCCGATAGGTTCTaGGAGGCTCCTGGAAGCACACTCAGTGCTTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: TMSLSSGHADRF*EAPGSTLSALQ Trigger: TTGCAAAGCACTGAGTGTGCTTCCAGGAGCCTCCCAGAACCTATCGGCATGCCCTGAGCTGAGGGACATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS CAA 90 bp | GGTGAGATGAGGACAGCAACGCTCTCCCATGATGACCAAACCAGCTaGAAACTGGGAGGCATCGACTGTTTTGCCTCTATGCTCGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GEMRTATLSHDDQTS*KLGGIDCFASMLVA Trigger: TGCCACGAGCATAGAGGCAAAACAGTCGATGCCTCCCAGTTTCAAGCTGGTTTGGTCATCATGGGAGAGCGTTGCTGTCCTCATCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS TCA 72 bp | GGACAGCAACGCTCTCCCATGATGACCAAACCAGCTTaGAACTGGGAGGCATCGACTGTTTTGCCTCTATGC | + |
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Preference number: 6 (lower is better) Translates to: GQQRSPMMTKPA*NWEASTVLPLC Trigger: GCATAGAGGCAAAACAGTCGATGCCTCCCAGTTTCAAGCTGGTTTGGTCATCATGGGAGAGCGTTGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS GCA 72 bp | GAGTGCTCCGCACACGTGAGGGATCATAGGGTGGCTTaGGTAACAAGGAGTTGCAGAGAGAATCTGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: ECSAHVRDHRVA*VTRSCRENLNL Trigger: CAAGTTCAGATTCTCTCTGCAACTCCTTGTTACGCAAGCCACCCTATGATCCCTCACGTGTGCGGAGCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS CAA 90 bp | CATGCCGATAGGTTCTGGGAGGCTCCTGGAAGCACACTCAGTGCTTaGCAAAGAAAGCGCTGGATCCTGAGAAGAAAGAATCTGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: HADRFWEAPGSTLSA*QRKRWILRRKNLAM Trigger: CATGGCCAGATTCTTTCTTCTCAGGATCCAGCGCTTTCTTTGCAAAGCACTGAGTGTGCTTCCAGGAGCCTCCCAGAACCTATCGGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS TCA 72 bp | GCTTCAGTGTTCTTCTTGGGGAAGCTGGGAGGACAGTaGATACTTCACAGGGCTGTTGTGGGGATTAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: ASVFFLGKLGGQ*ILHRAVVGIKG Trigger: CCCTTTAATCCCCACAACAGCCCTGTGAAGTATTCACTGTCCTCCCAGCTTCCCCAAGAAGAACACTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS GCA 72 bp | AATTTCAGCCACAAGACAGGGACTTGGAAGTCAGGCTaGCTGGGTTCAAGGCCTATATTTGCCCCTGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: NFSHKTGTWKSG*LGSRPIFAPVY Trigger: GTAGACAGGGGCAAATATAGGCCTTGAACCCAGGCAGCCTGACTTCCAAGTCCCTGTCTTGTGGCTGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS GCA 72 bp | GTGAGGGATCATAGGGTGGCTTGCGTAACAAGGAGTTaGAGAGAGAATCTGAACTTGGATCACTGCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: VRDHRVACVTRS*RENLNLDHCWG Trigger: TCCCCAGCAGTGATCCAAGTTCAGATTCTCTCTGCAACTCCTTGTTACGCAAGCCACCCTATGATCCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS CAA 72 bp | AGGACAGCAACGCTCTCCCATGATGACCAAACCAGCTaGAAACTGGGAGGCATCGACTGTTTTGCCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: RTATLSHDDQTS*KLGGIDCFASM Trigger: CATAGAGGCAAAACAGTCGATGCCTCCCAGTTTCAAGCTGGTTTGGTCATCATGGGAGAGCGTTGCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS TCA 72 bp | GGTTCAAGGCCTATATTTGCCCCTGTCTACTTTCTGTaGCCTTGGATGAGTGACTTGCTCTTGGGAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSRPIFAPVYFL*PWMSDLLLGGF Trigger: GAAGCCTCCCAAGAGCAAGTCACTCATCCAAGGTCACAGAAAGTAGACAGGGGCAAATATAGGCCTTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS CCA 72 bp | AGCTGGGAGGACAGTGAATACTTCACAGGGCTGTTGTaGGGATTAAAGGGGATAGAGCGTGTAAAGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SWEDSEYFTGLL*GLKGIERVKCS Trigger: AGAGCACTTTACACGCTCTATCCCCTTTAATCCCCACAACAGCCCTGTGAAGTATTCACTGTCCTCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS CAA 72 bp | AGGTTCTGGGAGGCTCCTGGAAGCACACTCAGTGCTTaGCAAAGAAAGCGCTGGATCCTGAGAAGAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RFWEAPGSTLSA*QRKRWILRRKN Trigger: ATTCTTTCTTCTCAGGATCCAGCGCTTTCTTTGCAAAGCACTGAGTGTGCTTCCAGGAGCCTCCCAGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS CAA 72 bp | AAAACTGGTGGGGAATTTCAGCCACAAGACAGGGACTaGGAAGTCAGGCTGCCTGGGTTCAAGGCCTATATT | + |
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Preference number: 6 (lower is better) Translates to: KTGGEFQPQDRD*EVRLPGFKAYI Trigger: AATATAGGCCTTGAACCCAGGCAGCCTGACTTCCAAGTCCCTGTCTTGTGGCTGAAATTCCCCACCAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS TCA 72 bp | ATTTGCCCCTGTCTACTTTCTGTGACCTTGGATGAGTaGCTTGCTCTTGGGAGGCTTCAGTGTTCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: ICPCLLSVTLDE*LALGRLQCSSW Trigger: CCAAGAAGAACACTGAAGCCTCCCAAGAGCAAGTCACTCATCCAAGGTCACAGAAAGTAGACAGGGGCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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| CDS CAA 72 bp | CATGGTAGACACCGGGATAACAACAACAGTCCTCTCTaGTTTCAAGGGATTCGGAACCACCCATGGCATAAG | + |
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Preference number: 6 (lower is better) Translates to: HGRHRDNNNSPL*FQGIRNHPWHK Trigger: CTTATGCCATGGGTGGTTCCGAATCCCTTGAAACAAGAGAGGACTGTTGTTGTTATCCCGGTGTCTACCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555299.1 ENST00000630965.1 |
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