Pregenerated sensors for LINC02285 (Homo sapiens)

Ensembl gene IDs: ENSG00000259004

Ensembl transcript IDs: ENST00000557121.2

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTGAGGCTCACGGTGTCAAGAGTGGAGGAATCAAGCCGATCGGGCTaGCTCTCCACCCAGACTGGGGGACTCCTCACTGAAGGGCCTCCA	+
Preference number: 5 (lower is better) Translates to: LRLTVSRVEESSRSG*LSTQTGGLLTEGPP Trigger: TGGAGGCCCTTCAGTGAGGAGTCCCCCAGTCTGGGTGGAGAGCCAGCCCGATCGGCTTGATTCCTCCACTCTTGACACCGTGAGCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS CCA 90 bp	GTTGTCTCAGAGGGTCACCAGGAAGTGCACGGTCCAGGTGGGCATTaGGTCATCCCAGCCCCAGAAAGGCTTCAGCATCAGAGGGCTGCA	+
Preference number: 5 (lower is better) Translates to: VVSEGHQEVHGPGGH*VIPAPERLQHQRAA Trigger: TGCAGCCCTCTGATGCTGAAGCCTTTCTGGGGCTGGGATGACCCAATGCCCACCTGGACCGTGCACTTCCTGGTGACCCTCTGAGACAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS CCA 90 bp	CCAGGAAGTTGTCTCAGAGGGTCACCAGGAAGTGCACGGTCCAGGTaGGCATTGGGTCATCCCAGCCCCAGAAAGGCTTCAGCATCAGAG	+
Preference number: 5 (lower is better) Translates to: PGSCLRGSPGSARSR*ALGHPSPRKASASE Trigger: CTCTGATGCTGAAGCCTTTCTGGGGCTGGGATGACCCAATGCCCACCTGGACCGTGCACTTCCTGGTGACCCTCTGAGACAACTTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS TCA 90 bp	ACACTGGAGCTGCGCAGTTTCAGGCCACTGTTCCCAGACTTGCACTaGCTCCATGATGATCAACTCTGCCCAGGAAGTTGTCTCAGAGGG	+
Preference number: 5 (lower is better) Translates to: TLELRSFRPLFPDLH*LHDDQLCPGSCLRG Trigger: CCCTCTGAGACAACTTCCTGGGCAGAGTTGATCATCATGGAGTCAGTGCAAGTCTGGGAACAGTGGCCTGAAACTGCGCAGCTCCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS GCA 90 bp	CCGACACACTGGAGCTGCGCAGTTTCAGGCCACTGTTCCCAGACTTaGACTGACTCCATGATGATCAACTCTGCCCAGGAAGTTGTCTCA	+
Preference number: 5 (lower is better) Translates to: PTHWSCAVSGHCSQT*TDSMMINSAQEVVS Trigger: TGAGACAACTTCCTGGGCAGAGTTGATCATCATGGAGTCAGTGCAAGTCTGGGAACAGTGGCCTGAAACTGCGCAGCTCCAGTGTGTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS CCA 90 bp	AGGCATAACATATGCAATAAAATGCACGCATCTGAAGTGTGCAGCTaGATGCATCTCACAGGCACAGACATGCAGGAAACCTCTATCTCA	+
Preference number: 5 (lower is better) Translates to: RHNICNKMHASEVCS*MHLTGTDMQETSIS Trigger: TGAGATAGAGGTTTCCTGCATGTCTGTGCCTGTGAGATGCATCCAGCTGCACACTTCAGATGCGTGCATTTTATTGCATATGTTATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS GCA 90 bp	AAATCAAGGCATAACATATGCAATAAAATGCACGCATCTGAAGTGTaGAGCTGGATGCATCTCACAGGCACAGACATGCAGGAAACCTCT	+
Preference number: 5 (lower is better) Translates to: KSRHNICNKMHASEV*SWMHLTGTDMQETS Trigger: AGAGGTTTCCTGCATGTCTGTGCCTGTGAGATGCATCCAGCTGCACACTTCAGATGCGTGCATTTTATTGCATATGTTATGCCTTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS GCA 90 bp	GGCATGCCAACAGCTCTTTCCTTTTCCTTGCTGTGTAGAATTCTTTaGATGAATATAATGGGATTTACTGCACATGTTACAGTGAATGGG	+
Preference number: 5 (lower is better) Translates to: GMPTALSFSLLCRIL*MNIMGFTAHVTVNG Trigger: CCCATTCACTGTAACATGTGCAGTAAATCCCATTATATTCATGCAAAGAATTCTACACAGCAAGGAAAAGGAAAGAGCTGTTGGCATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS GCA 72 bp	CTGCCCAGGAAGTTGTCTCAGAGGGTCACCAGGAAGTaGACGGTCCAGGTGGGCATTGGGTCATCCCAGCCC	+
Preference number: 6 (lower is better) Translates to: LPRKLSQRVTRK*TVQVGIGSSQP Trigger: GGGCTGGGATGACCCAATGCCCACCTGGACCGTGCACTTCCTGGTGACCCTCTGAGACAACTTCCTGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS CCA 72 bp	GAGGGTCACCAGGAAGTGCACGGTCCAGGTGGGCATTaGGTCATCCCAGCCCCAGAAAGGCTTCAGCATCAG	+
Preference number: 6 (lower is better) Translates to: EGHQEVHGPGGH*VIPAPERLQHQ Trigger: CTGATGCTGAAGCCTTTCTGGGGCTGGGATGACCCAATGCCCACCTGGACCGTGCACTTCCTGGTGACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS CAA 90 bp	AGTTGTCTCAGAGGGTCACCAGGAAGTGCACGGTCCAGGTGGGCATaGGGTCATCCCAGCCCCAGAAAGGCTTCAGCATCAGAGGGCTGC	+
Preference number: 6 (lower is better) Translates to: SCLRGSPGSARSRWA*GHPSPRKASASEGC Trigger: GCAGCCCTCTGATGCTGAAGCCTTTCTGGGGCTGGGATGACCCAATGCCCACCTGGACCGTGCACTTCCTGGTGACCCTCTGAGACAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS GCA 72 bp	CTCCTCACTGAAGGGCCTCCACCGACACACTGGAGCTaGGCAGTTTCAGGCCACTGTTCCCAGACTTGCACT	+
Preference number: 6 (lower is better) Translates to: LLTEGPPPTHWS*AVSGHCSQTCT Trigger: AGTGCAAGTCTGGGAACAGTGGCCTGAAACTGCGCAGCTCCAGTGTGTCGGTGGAGGCCCTTCAGTGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS CCA 72 bp	ACGGTGTCAAGAGTGGAGGAATCAAGCCGATCGGGCTaGCTCTCCACCCAGACTGGGGGACTCCTCACTGAA	+
Preference number: 6 (lower is better) Translates to: TVSRVEESSRSG*LSTQTGGLLTE Trigger: TTCAGTGAGGAGTCCCCCAGTCTGGGTGGAGAGCCAGCCCGATCGGCTTGATTCCTCCACTCTTGACACCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS CAA 72 bp	AGAGGGTCACCAGGAAGTGCACGGTCCAGGTGGGCATaGGGTCATCCCAGCCCCAGAAAGGCTTCAGCATCA	+
Preference number: 6 (lower is better) Translates to: RGSPGSARSRWA*GHPSPRKASAS Trigger: TGATGCTGAAGCCTTTCTGGGGCTGGGATGACCCAATGCCCACCTGGACCGTGCACTTCCTGGTGACCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS TCA 72 bp	CTGCGCAGTTTCAGGCCACTGTTCCCAGACTTGCACTaGCTCCATGATGATCAACTCTGCCCAGGAAGTTGT	+
Preference number: 6 (lower is better) Translates to: LRSFRPLFPDLH*LHDDQLCPGSC Trigger: ACAACTTCCTGGGCAGAGTTGATCATCATGGAGTCAGTGCAAGTCTGGGAACAGTGGCCTGAAACTGCGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS TCA 72 bp	CGCCCCTCCAGTCAACAACCCCAGAAACAGCAGCAATaGAGCTGTTGGCATAGATGGTTCTTGCCTGGTTCT	+
Preference number: 6 (lower is better) Translates to: RPSSQQPQKQQQ*SCWHRWFLPGS Trigger: AGAACCAGGCAAGAACCATCTATGCCAACAGCTTCATTGCTGCTGTTTCTGGGGTTGTTGACTGGAGGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS GCA 72 bp	AGCAGTAGGTCTGTGAGATCCACCTGTGTTGTGGCATaGCAACAGCTCTTTCCTTTTCCTTGCTGTGTAGAA	+
Preference number: 6 (lower is better) Translates to: SSRSVRSTCVVA*QQLFPFPCCVE Trigger: TTCTACACAGCAAGGAAAAGGAAAGAGCTGTTGGCATGCCACAACACAGGTGGATCTCACAGACCTACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS CCA 72 bp	ATATGCAATAAAATGCACGCATCTGAAGTGTGCAGCTaGATGCATCTCACAGGCACAGACATGCAGGAAACC	+
Preference number: 6 (lower is better) Translates to: ICNKMHASEVCS*MHLTGTDMQET Trigger: GGTTTCCTGCATGTCTGTGCCTGTGAGATGCATCCAGCTGCACACTTCAGATGCGTGCATTTTATTGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2
CDS GCA 72 bp	CATAACATATGCAATAAAATGCACGCATCTGAAGTGTaGAGCTGGATGCATCTCACAGGCACAGACATGCAG	+
Preference number: 6 (lower is better) Translates to: HNICNKMHASEV*SWMHLTGTDMQ Trigger: CTGCATGTCTGTGCCTGTGAGATGCATCCAGCTGCACACTTCAGATGCGTGCATTTTATTGCATATGTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557121.2