Pregenerated sensors for LINC02284 (Homo sapiens)
Ensembl gene IDs: ENSG00000259719Ensembl transcript IDs: ENST00000558120.5, ENST00000560924.2, ENST00000663878.1, ENST00000664388.1, ENST00000664536.1, ENST00000666463.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCATGCTCCCTCCTCAGCACCTCTTGTACATTCAGAGCTCCTGCATaGGATGCCGAGAACTCACACCCTTCCAGGGCTGCTGAAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: ACSLLSTSCTFRAPA*DAENSHPSRAAEDH Trigger: ATGATCTTCAGCAGCCCTGGAAGGGTGTGAGTTCTCGGCATCCCATGCAGGAGCTCTGAATGTACAAGAGGTGCTGAGGAGGGAGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000558120.5 ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS CCA 90 bp | CCAGATACATCACAGGAGGAGGCTGAGCACACGGTTCCGCATGGCTaGGAAGGCCTCAGGAAACTCACAATCATGGTGGAAGGTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: PDTSQEEAEHTVPHG*EGLRKLTIMVEGEE Trigger: CTCTTCACCTTCCACCATGATTGTGAGTTTCCTGAGGCCTTCCCAGCCATGCGGAACCGTGTGCTCAGCCTCCTCCTGTGATGTATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS CCA 90 bp | AGACAGTCCAGACAGCACGGTGCAGCAACAAAACAGGGGAGACGATaGGGCCAAAGAGGGCTTTCACATTTGTCTAACTCTCCTGCACAC | + |
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Preference number: 5 (lower is better) Translates to: RQSRQHGAATKQGRR*GQRGLSHLSNSPAH Trigger: GTGTGCAGGAGAGTTAGACAAATGTGAAAGCCCTCTTTGGCCCCATCGTCTCCCCTGTTTTGTTGCTGCACCGTGCTGTCTGGACTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560924.2 |
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| CDS CCA 90 bp | GTATTCACCTCCTTTTCCATGAGGATAGTGAGGTCATCCAGCGTTTaGCACCGGCGCATGCTCCCTCCTCAGCACCTCTTGTACATTCAG | + |
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Preference number: 5 (lower is better) Translates to: VFTSFSMRIVRSSSV*HRRMLPPQHLLYIQ Trigger: CTGAATGTACAAGAGGTGCTGAGGAGGGAGCATGCGCCGGTGCCAAACGCTGGATGACCTCACTATCCTCATGGAAAAGGAGGTGAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664388.1 |
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| CDS GCA 90 bp | TTCAGGATGAACAGTTCCTGGTGGGGATTTGCACCCAGTGTTTCCTaGTCCACATCCGCATGGTATCCATCAGGCACATGGTGGAAACCA | + |
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Preference number: 5 (lower is better) Translates to: FRMNSSWWGFAPSVS*STSAWYPSGTWWKP Trigger: TGGTTTCCACCATGTGCCTGATGGATACCATGCGGATGTGGAGCAGGAAACACTGGGTGCAAATCCCCACCAGGAACTGTTCATCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000558120.5 ENST00000663878.1 ENST00000664536.1 |
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| CDS TCA 90 bp | GCATGGCTGGGAAGGCCTCAGGAAACTCACAATCATGGTGGAAGGTaGAGAGGAAGTAAGGATCTTCTCCACATGGTATCAGGAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: AWLGRPQETHNHGGR*RGSKDLLHMVSGER Trigger: TCTCTCTCCTGATACCATGTGGAGAAGATCCTTACTTCCTCTTCACCTTCCACCATGATTGTGAGTTTCCTGAGGCCTTCCCAGCCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664388.1 |
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| CDS TCA 90 bp | GACCAGAGAAGAGATAAACAGCCTTTTGCCTTTCACCATGGAGGATaGAATCCAGATACATCACAGGAGGAGGCTGAGCACACGGTTCCG | + |
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Preference number: 5 (lower is better) Translates to: DQRRDKQPFAFHHGG*NPDTSQEEAEHTVP Trigger: CGGAACCGTGTGCTCAGCCTCCTCCTGTGATGTATCTGGATTTCATCCTCCATGGTGAAAGGCAAAAGGCTGTTTATCTCTTCTCTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS GCA 90 bp | ATGGGCCTTAGGCGCTTTGGTTTTTCTGGGCTTCTTCCTTCTACTTaGTTTTACTCTTGCTGGACTCCCATCACTGTGGCTTCACTGGAA | + |
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Preference number: 5 (lower is better) Translates to: MGLRRFGFSGLLPST*FYSCWTPITVASLE Trigger: TTCCAGTGAAGCCACAGTGATGGGAGTCCAGCAAGAGTAAAAGCAAGTAGAAGGAAGAAGCCCAGAAAAACCAAAGCGCCTAAGGCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS CCA 90 bp | CTTTCCATTCCAGTCATAACTTGCTTGGACACAGAAAGAAGGCAGTaGTATTCGGCGCATGCTCCCTCCTCAGCACCTCTTGTACATTCA | + |
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Preference number: 5 (lower is better) Translates to: LSIPVITCLDTERRQ*YSAHAPSSAPLVHS Trigger: TGAATGTACAAGAGGTGCTGAGGAGGGAGCATGCGCCGAATACCACTGCCTTCTTTCTGTGTCCAAGCAAGTTATGACTGGAATGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664536.1 |
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| CDS TCA 90 bp | ACACAAGGAGGGGTAGAGGAAGAGGCCCAGATAGTTCTGTGGCACTaGAGGCAGCTAAGAAAAGAAGGAACTCTTGACTTTGCGATTAGA | + |
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Preference number: 5 (lower is better) Translates to: TQGGVEEEAQIVLWH*RQLRKEGTLDFAIR Trigger: TCTAATCGCAAAGTCAAGAGTTCCTTCTTTTCTTAGCTGCCTTCAGTGCCACAGAACTATCTGGGCCTCTTCCTCTACCCCTCCTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558120.5 ENST00000663878.1 |
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| CDS TCA 90 bp | AGTCTGAGCTCTTGGATTCAGCTGTTCCTGAAATCAGAGGCACACTaGACTTCCCAATCCCAAGAGGCAATAAGTTCCTTTTGTGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: SLSSWIQLFLKSEAH*TSQSQEAISSFCVP Trigger: GGGGACACAAAAGGAACTTATTGCCTCTTGGGATTGGGAAGTTCAGTGTGCCTCTGATTTCAGGAACAGCTGAATCCAAGAGCTCAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS CCA 90 bp | CTCCTTGAATTTATGAGCACCAATGCATCTCCCTTGCATCTGCTTTaGCTGTTGCTTTTGAAAGGAGCGATCACACAAGGAGGGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: LLEFMSTNASPLHLL*LLLLKGAITQGGVE Trigger: CTCTACCCCTCCTTGTGTGATCGCTCCTTTCAAAAGCAACAGCCAAAGCAGATGCAAGGGAGATGCATTGGTGCTCATAAATTCAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000558120.5 ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000666463.1 |
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| CDS TCA 90 bp | TCACTGGAATTCGATGATCATGTTCTGTATCAACATGTCTGCAATTaGGTAGGTAGGGGTACTGACAGCCCCGGGTGGCTATACTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SLEFDDHVLYQHVCN*VGRGTDSPGWLYFP Trigger: TGGAAAGTATAGCCACCCGGGGCTGTCAGTACCCCTACCTACTCAATTGCAGACATGTTGATACAGAACATGATCATCGAATTCCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS TCA 90 bp | AACAAAAGAGAACAAGGCACCATATACCTTCTCCGTTCCATGCCTTaGATGCTGGCCTCTAGCTGCTGTTCTTCCAAGGTGAGAAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: NKREQGTIYLLRSMP*MLASSCCSSKVRKR Trigger: TCTCTTTCTCACCTTGGAAGAACAGCAGCTAGAGGCCAGCATTCAAGGCATGGAACGGAGAAGGTATATGGTGCCTTGTTCTCTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS TCA 90 bp | ATCCTTCAAGGGACAATATGTTCTGCAAAAAGCAGAGTGAACACCTaGAATGAAACAACTCATCCCTGCATTCTGCACAGTGGCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: ILQGTICSAKSRVNT*NETTHPCILHSGWA Trigger: AGCCCAGCCACTGTGCAGAATGCAGGGATGAGTTGTTTCATTTCAGGTGTTCACTCTGCTTTTTGCAGAACATATTGTCCCTTGAAGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664536.1 |
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| CDS TCA 90 bp | TCACAGCATTTACATTTCTTGTTGATAGCTAGTGAAGATTCTCCTTaGAGCTCAAGTTCTCGCTGCCCTCTGTCCCAGTCCCCTGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: SQHLHFLLIASEDSP*SSSSRCPLSQSPVE Trigger: TTCTACAGGGGACTGGGACAGAGGGCAGCGAGAACTTGAGCTTCAAGGAGAATCTTCACTAGCTATCAACAAGAAATGTAAATGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS CCA 90 bp | TCTAACTCTCCTGCACACACACAGAAGGGAAGTTTGCCTTACTTCTaGATATATCAAGGGAGTGATATAAAGGGCCCCAGTGGATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SNSPAHTQKGSLPYF*IYQGSDIKGPSGSE Trigger: TTCAGATCCACTGGGGCCCTTTATATCACTCCCTTGATATATCCAGAAGTAAGGCAAACTTCCCTTCTGTGTGTGTGCAGGAGAGTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560924.2 |
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| CDS CCA 90 bp | TATCAGGAGAGAGAACTTCATGGTAAGGAGTCATTACAGCTTTCATaGGCCTTAGGCGCTTTGGTTTTTCTGGGCTTCTTCCTTCTACTT | + |
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Preference number: 5 (lower is better) Translates to: YQERELHGKESLQLS*ALGALVFLGFFLLL Trigger: AAGTAGAAGGAAGAAGCCCAGAAAAACCAAAGCGCCTAAGGCCCATGAAAGCTGTAATGACTCCTTACCATGAAGTTCTCTCTCCTGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664388.1 |
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| CDS CCA 90 bp | TTTGGTTTTTCTGGGCTTCTTCCTTCTACTTGCTTTTACTCTTGCTaGACTCCCATCACTGTGGCTTCACTGGAATTCGATGATCATGTT | + |
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Preference number: 5 (lower is better) Translates to: FGFSGLLPSTCFYSC*TPITVASLEFDDHV Trigger: AACATGATCATCGAATTCCAGTGAAGCCACAGTGATGGGAGTCCAGCAAGAGTAAAAGCAAGTAGAAGGAAGAAGCCCAGAAAAACCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS CCA 90 bp | GCTCAAGGATTAGAGTTGAAAGCAGGAAAATCTGCTGTGCTTAACTaGGTAAAGTCACAGCATTTACATTTCTTGTTGATAGCTAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: AQGLELKAGKSAVLN*VKSQHLHFLLIASE Trigger: TTCACTAGCTATCAACAAGAAATGTAAATGCTGTGACTTTACCCAGTTAAGCACAGCAGATTTTCCTGCTTTCAACTCTAATCCTTGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS TCA 90 bp | GACTTCCCATTCTGGGGCTACAATGTTTCAAGTCTTTGCCGAGTGTaGAAGAAATCAAATTTATCAGCTATTGAGTTGAATCCTAAAATA | + |
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Preference number: 5 (lower is better) Translates to: DFPFWGYNVSSLCRV*KKSNLSAIELNPKI Trigger: TATTTTAGGATTCAACTCAATAGCTGATAAATTTGATTTCTTTCACACTCGGCAAAGACTTGAAACATTGTAGCCCCAGAATGGGAAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS TCA 90 bp | TTTGGAAGAAACACTGTCCATAAGCCTCACCTAAATTGGCACAACTaGAAATGCCCATCTTTTCATAAGTCTATTGAACGATGTTATTCA | + |
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Preference number: 5 (lower is better) Translates to: FGRNTVHKPHLNWHN*KCPSFHKSIERCYS Trigger: TGAATAACATCGTTCAATAGACTTATGAAAAGATGGGCATTTTCAGTTGTGCCAATTTAGGTGAGGCTTATGGACAGTGTTTCTTCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS TCA 90 bp | TCTTCCAAGGTGAGAAAGAGACCTAGTTATACTTTACAGAGAATTTaGGAATCATGGTCCTTTAGACTTGGGAACATTTTGGAAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: SSKVRKRPSYTLQRI*ESWSFRLGNILEET Trigger: TGTTTCTTCCAAAATGTTCCCAAGTCTAAAGGACCATGATTCTCAAATTCTCTGTAAAGTATAACTAGGTCTCTTTCTCACCTTGGAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS CAA 90 bp | TCATCCAGCGTTTGGCACCGGCGCATGCTCCCTCCTCAGCACCTCTaGTACATTCAGAGCTCCTGCATGGGATGCCGAGAACTCACACCC | + |
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Preference number: 6 (lower is better) Translates to: SSSVWHRRMLPPQHL*YIQSSCMGCRELTP Trigger: GGGTGTGAGTTCTCGGCATCCCATGCAGGAGCTCTGAATGTACAAGAGGTGCTGAGGAGGGAGCATGCGCCGGTGCCAAACGCTGGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000558120.5 ENST00000663878.1 ENST00000664388.1 |
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| CDS TCA 72 bp | TGGAGGATGAAATCCAGATACATCACAGGAGGAGGCTaGGCACACGGTTCCGCATGGCTGGGAAGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: WRMKSRYITGGG*AHGSAWLGRPQ Trigger: CTGAGGCCTTCCCAGCCATGCGGAACCGTGTGCTCAGCCTCCTCCTGTGATGTATCTGGATTTCATCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS CCA 72 bp | CTCCTCAGCACCTCTTGTACATTCAGAGCTCCTGCATaGGATGCCGAGAACTCACACCCTTCCAGGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLSTSCTFRAPA*DAENSHPSRAA Trigger: AGCAGCCCTGGAAGGGTGTGAGTTCTCGGCATCCCATGCAGGAGCTCTGAATGTACAAGAGGTGCTGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000558120.5 ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS CCA 72 bp | TCCTTTTCCATGAGGATAGTGAGGTCATCCAGCGTTTaGCACCGGCGCATGCTCCCTCCTCAGCACCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SFSMRIVRSSSV*HRRMLPPQHLL Trigger: CAAGAGGTGCTGAGGAGGGAGCATGCGCCGGTGCCAAACGCTGGATGACCTCACTATCCTCATGGAAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664388.1 |
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| CDS CCA 72 bp | TCACAGGAGGAGGCTGAGCACACGGTTCCGCATGGCTaGGAAGGCCTCAGGAAACTCACAATCATGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SQEEAEHTVPHG*EGLRKLTIMVE Trigger: TTCCACCATGATTGTGAGTTTCCTGAGGCCTTCCCAGCCATGCGGAACCGTGTGCTCAGCCTCCTCCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS CAA 72 bp | CTCCTTTTCCATGAGGATAGTGAGGTCATCCAGCGTTaGGCACCGGCGCATGCTCCCTCCTCAGCACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLFHEDSEVIQR*APAHAPSSAPL Trigger: AAGAGGTGCTGAGGAGGGAGCATGCGCCGGTGCCAAACGCTGGATGACCTCACTATCCTCATGGAAAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664388.1 |
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| CDS CAA 90 bp | AAAGAAGGCAGTGGTATTCGGCGCATGCTCCCTCCTCAGCACCTCTaGTACATTCAGAGCTCCTGCATGGGATGCCGAGAACTCACACCC | + |
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Preference number: 6 (lower is better) Translates to: KEGSGIRRMLPPQHL*YIQSSCMGCRELTP Trigger: GGGTGTGAGTTCTCGGCATCCCATGCAGGAGCTCTGAATGTACAAGAGGTGCTGAGGAGGGAGCATGCGCCGAATACCACTGCCTTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664536.1 |
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| CDS GCA 72 bp | AACAGTTCCTGGTGGGGATTTGCACCCAGTGTTTCCTaGTCCACATCCGCATGGTATCCATCAGGCACATGG | + |
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Preference number: 6 (lower is better) Translates to: NSSWWGFAPSVS*STSAWYPSGTW Trigger: CCATGTGCCTGATGGATACCATGCGGATGTGGAGCAGGAAACACTGGGTGCAAATCCCCACCAGGAACTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000558120.5 ENST00000663878.1 ENST00000664536.1 |
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| CDS CAA 90 bp | GGTATTCACCTCCTTTTCCATGAGGATAGTGAGGTCATCCAGCGTTaGGCACCGGCGCATGCTCCCTCCTCAGCACCTCTTGTACATTCA | + |
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Preference number: 6 (lower is better) Translates to: GIHLLFHEDSEVIQR*APAHAPSSAPLVHS Trigger: TGAATGTACAAGAGGTGCTGAGGAGGGAGCATGCGCCGGTGCCAAACGCTGGATGACCTCACTATCCTCATGGAAAAGGAGGTGAATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664388.1 |
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| CDS GCA 72 bp | CTTGGACACAGAAAGAAGGCAGTGGTATTCGGCGCATaGTCCCTCCTCAGCACCTCTTGTACATTCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LGHRKKAVVFGA*SLLSTSCTFRA Trigger: AGCTCTGAATGTACAAGAGGTGCTGAGGAGGGAGCATGCGCCGAATACCACTGCCTTCTTTCTGTGTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664536.1 |
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| CDS CCA 72 bp | CCAGTCATAACTTGCTTGGACACAGAAAGAAGGCAGTaGTATTCGGCGCATGCTCCCTCCTCAGCACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PVITCLDTERRQ*YSAHAPSSAPL Trigger: AAGAGGTGCTGAGGAGGGAGCATGCGCCGAATACCACTGCCTTCTTTCTGTGTCCAAGCAAGTTATGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664536.1 |
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| CDS TCA 72 bp | AAGAGGTGGCCATGGGAAGCTATGTGCGCTTCCATCTaGCGACAAGGCCCAAGGAAAAGCATTCAAAACCCA | + |
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Preference number: 6 (lower is better) Translates to: KRWPWEAMCASI*RQGPRKSIQNP Trigger: TGGGTTTTGAATGCTTTTCCTTGGGCCTTGTCGTCAGATGGAAGCGCACATAGCTTCCCATGGCCACCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS TCA 72 bp | GAACAAGGCACCATATACCTTCTCCGTTCCATGCCTTaGATGCTGGCCTCTAGCTGCTGTTCTTCCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: EQGTIYLLRSMP*MLASSCCSSKV Trigger: CACCTTGGAAGAACAGCAGCTAGAGGCCAGCATTCAAGGCATGGAACGGAGAAGGTATATGGTGCCTTGTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS GCA 72 bp | CCAAAGAGCAGATGGTGCAAGCAATATCTCAGTGAATaGCAGTCCATACTGAAGGCCACCTCCTCCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PKSRWCKQYLSE*QSILKATSSFP Trigger: TGGGAAGGAGGAGGTGGCCTTCAGTATGGACTGGCATTCACTGAGATATTGCTTGCACCATCTGCTCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560924.2 |
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| CDS CCA 72 bp | ACTCATTACCATCTACGACAGGGGTGTTCAATCTTTTaGCTTCCTTTAGGGTTCCGCATGGCTGGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: THYHLRQGCSIF*LPLGFRMAGKA Trigger: GGCCTTCCCAGCCATGCGGAACCCTAAAGGAAGCCAAAAGATTGAACACCCCTGTCGTAGATGGTAATGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560924.2 |
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| CDS CCA 72 bp | AGACAGCACGGTGCAGCAACAAAACAGGGGAGACGATaGGGCCAAAGAGGGCTTTCACATTTGTCTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: RQHGAATKQGRR*GQRGLSHLSNS Trigger: AGAGTTAGACAAATGTGAAAGCCCTCTTTGGCCCCATCGTCTCCCCTGTTTTGTTGCTGCACCGTGCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560924.2 |
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| CDS CAA 72 bp | GCCCCGGGTGGCTATACTTTCCATTCCAGTCATAACTaGCTTGGACACAGAAAGAAGGCAGTGGTATTCGGC | + |
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Preference number: 6 (lower is better) Translates to: APGGYTFHSSHN*LGHRKKAVVFG Trigger: GCCGAATACCACTGCCTTCTTTCTGTGTCCAAGCAAGTTATGACTGGAATGGAAAGTATAGCCACCCGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664536.1 |
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| CDS CAA 72 bp | GCCCCGGGTGGCTATACTTTCCATTCCAGTCATAACTaGCTTGGACACAGAAAGAAGGCAGTGGTATTCACC | + |
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Preference number: 6 (lower is better) Translates to: APGGYTFHSSHN*LGHRKKAVVFT Trigger: GGTGAATACCACTGCCTTCTTTCTGTGTCCAAGCAAGTTATGACTGGAATGGAAAGTATAGCCACCCGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664388.1 |
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| CDS TCA 72 bp | TTCGATGATCATGTTCTGTATCAACATGTCTGCAATTaGGTAGGTAGGGGTACTGACAGCCCCGGGTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: FDDHVLYQHVCN*VGRGTDSPGWL Trigger: TAGCCACCCGGGGCTGTCAGTACCCCTACCTACTCAATTGCAGACATGTTGATACAGAACATGATCATCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS TCA 72 bp | ATGTCCAAAGAGCAGATGGTGCAAGCAATATCTCAGTaGATGCCAGTCCATACTGAAGGCCACCTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: MSKEQMVQAISQ*MPVHTEGHLLL Trigger: AAGGAGGAGGTGGCCTTCAGTATGGACTGGCATTCACTGAGATATTGCTTGCACCATCTGCTCTTTGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560924.2 |
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| CDS TCA 72 bp | GGGGTAGAGGAAGAGGCCCAGATAGTTCTGTGGCACTaGAGGCAGCTAAGAAAAGAAGGAACTCTTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: GVEEEAQIVLWH*RQLRKEGTLDF Trigger: AAAGTCAAGAGTTCCTTCTTTTCTTAGCTGCCTTCAGTGCCACAGAACTATCTGGGCCTCTTCCTCTACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558120.5 ENST00000663878.1 |
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| CDS GCA 72 bp | AGGCGCTTTGGTTTTTCTGGGCTTCTTCCTTCTACTTaGTTTTACTCTTGCTGGACTCCCATCACTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RRFGFSGLLPST*FYSCWTPITVA Trigger: AGCCACAGTGATGGGAGTCCAGCAAGAGTAAAAGCAAGTAGAAGGAAGAAGCCCAGAAAAACCAAAGCGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS GCA 72 bp | AAAGAGAACAAGGCACCATATACCTTCTCCGTTCCATaGCTTGAATGCTGGCCTCTAGCTGCTGTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: KENKAPYTFSVP*LECWPLAAVLP Trigger: TGGAAGAACAGCAGCTAGAGGCCAGCATTCAAGGCATGGAACGGAGAAGGTATATGGTGCCTTGTTCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS CAA 72 bp | CGGGTGGCTATACTTTCCATTCCAGTCATAACTTGCTaGGACACAGAAAGAAGGCAGTGGTATTCGGCGCAT | + |
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Preference number: 6 (lower is better) Translates to: RVAILSIPVITC*DTERRQWYSAH Trigger: ATGCGCCGAATACCACTGCCTTCTTTCTGTGTCCAAGCAAGTTATGACTGGAATGGAAAGTATAGCCACCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664536.1 |
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| CDS CAA 90 bp | GAATTTATGAGCACCAATGCATCTCCCTTGCATCTGCTTTGGCTGTaGCTTTTGAAAGGAGCGATCACACAAGGAGGGGTAGAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: EFMSTNASPLHLLWL*LLKGAITQGGVEEE Trigger: CTCTTCCTCTACCCCTCCTTGTGTGATCGCTCCTTTCAAAAGCAACAGCCAAAGCAGATGCAAGGGAGATGCATTGGTGCTCATAAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000558120.5 ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000666463.1 |
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| CDS TCA 72 bp | GGAAGGCCTCAGGAAACTCACAATCATGGTGGAAGGTaGAGAGGAAGTAAGGATCTTCTCCACATGGTATCA | + |
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Preference number: 6 (lower is better) Translates to: GRPQETHNHGGR*RGSKDLLHMVS Trigger: TGATACCATGTGGAGAAGATCCTTACTTCCTCTTCACCTTCCACCATGATTGTGAGTTTCCTGAGGCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664388.1 |
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| CDS CCA 72 bp | TCTGGGCTTCTTCCTTCTACTTGCTTTTACTCTTGCTaGACTCCCATCACTGTGGCTTCACTGGAATTCGAT | + |
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Preference number: 6 (lower is better) Translates to: SGLLPSTCFYSC*TPITVASLEFD Trigger: ATCGAATTCCAGTGAAGCCACAGTGATGGGAGTCCAGCAAGAGTAAAAGCAAGTAGAAGGAAGAAGCCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS CCA 72 bp | CCTGCACACACACAGAAGGGAAGTTTGCCTTACTTCTaGATATATCAAGGGAGTGATATAAAGGGCCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PAHTQKGSLPYF*IYQGSDIKGPS Trigger: ACTGGGGCCCTTTATATCACTCCCTTGATATATCCAGAAGTAAGGCAAACTTCCCTTCTGTGTGTGTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560924.2 |
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| CDS CAA 72 bp | CAGCTCCTTGAATTTATGAGCACCAATGCATCTCCCTaGCATCTGCTTTGGCTGTTGCTTTTGAAAGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: QLLEFMSTNASP*HLLWLLLLKGA Trigger: CGCTCCTTTCAAAAGCAACAGCCAAAGCAGATGCAAGGGAGATGCATTGGTGCTCATAAATTCAAGGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000558120.5 ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000666463.1 |
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| CDS CAA 72 bp | CGGGTGGCTATACTTTCCATTCCAGTCATAACTTGCTaGGACACAGAAAGAAGGCAGTGGTATTCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RVAILSIPVITC*DTERRQWYSPP Trigger: AGGAGGTGAATACCACTGCCTTCTTTCTGTGTCCAAGCAAGTTATGACTGGAATGGAAAGTATAGCCACCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664388.1 |
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| CDS CAA 90 bp | TGTTGTGAGATGGGAAAGGGTACTCCTGCTGCTCAAGGATTAGAGTaGAAAGCAGGAAAATCTGCTGTGCTTAACTGGGTAAAGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: CCEMGKGTPAAQGLE*KAGKSAVLNWVKSQ Trigger: CTGTGACTTTACCCAGTTAAGCACAGCAGATTTTCCTGCTTTCAACTCTAATCCTTGAGCAGCAGGAGTACCCTTTCCCATCTCACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS TCA 72 bp | CCTGAAATTGCCACAGCTGTTGCCATTTCAGCTCCTTaGATTTATGAGCACCAATGCATCTCCCTTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: PEIATAVAISAP*IYEHQCISLAS Trigger: AGATGCAAGGGAGATGCATTGGTGCTCATAAATTCAAGGAGCTGAAATGGCAACAGCTGTGGCAATTTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000558120.5 ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 ENST00000666463.1 |
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| CDS CCA 72 bp | TTTATGAGCACCAATGCATCTCCCTTGCATCTGCTTTaGCTGTTGCTTTTGAAAGGAGCGATCACACAAGGA | + |
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Preference number: 6 (lower is better) Translates to: FMSTNASPLHLL*LLLLKGAITQG Trigger: TCCTTGTGTGATCGCTCCTTTCAAAAGCAACAGCCAAAGCAGATGCAAGGGAGATGCATTGGTGCTCATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000558120.5 ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000666463.1 |
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| CDS CCA 72 bp | AGAGAACTTCATGGTAAGGAGTCATTACAGCTTTCATaGGCCTTAGGCGCTTTGGTTTTTCTGGGCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RELHGKESLQLS*ALGALVFLGFF Trigger: GAAGAAGCCCAGAAAAACCAAAGCGCCTAAGGCCCATGAAAGCTGTAATGACTCCTTACCATGAAGTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560924.2 ENST00000664388.1 |
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| CDS CAA 72 bp | ATTTATGAGCACCAATGCATCTCCCTTGCATCTGCTTaGGCTGTTGCTTTTGAAAGGAGCGATCACACAAGG | + |
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Preference number: 6 (lower is better) Translates to: IYEHQCISLASA*AVAFERSDHTR Trigger: CCTTGTGTGATCGCTCCTTTCAAAAGCAACAGCCAAAGCAGATGCAAGGGAGATGCATTGGTGCTCATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000558120.5 ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000666463.1 |
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| CDS CAA 72 bp | ATGGGAAAGGGTACTCCTGCTGCTCAAGGATTAGAGTaGAAAGCAGGAAAATCTGCTGTGCTTAACTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: MGKGTPAAQGLE*KAGKSAVLNWV Trigger: TACCCAGTTAAGCACAGCAGATTTTCCTGCTTTCAACTCTAATCCTTGAGCAGCAGGAGTACCCTTTCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS CAA 90 bp | TTGCCATTTCAGCTCCTTGAATTTATGAGCACCAATGCATCTCCCTaGCATCTGCTTTGGCTGTTGCTTTTGAAAGGAGCGATCACACAA | + |
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Preference number: 6 (lower is better) Translates to: LPFQLLEFMSTNASP*HLLWLLLLKGAITQ Trigger: TTGTGTGATCGCTCCTTTCAAAAGCAACAGCCAAAGCAGATGCAAGGGAGATGCATTGGTGCTCATAAATTCAAGGAGCTGAAATGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000558120.5 ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000666463.1 |
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| CDS CAA 90 bp | CTTCATGGTAAGGAGTCATTACAGCTTTCATGGGCCTTAGGCGCTTaGGTTTTTCTGGGCTTCTTCCTTCTACTTGCTTTTACTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LHGKESLQLSWALGA*VFLGFFLLLAFTLA Trigger: AGCAAGAGTAAAAGCAAGTAGAAGGAAGAAGCCCAGAAAAACCAAAGCGCCTAAGGCCCATGAAAGCTGTAATGACTCCTTACCATGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS CAA 90 bp | CTTTCACATTTGTCTAACTCTCCTGCACACACACAGAAGGGAAGTTaGCCTTACTTCTGGATATATCAAGGGAGTGATATAAAGGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LSHLSNSPAHTQKGS*PYFWIYQGSDIKGP Trigger: GGGGCCCTTTATATCACTCCCTTGATATATCCAGAAGTAAGGCAAACTTCCCTTCTGTGTGTGTGCAGGAGAGTTAGACAAATGTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560924.2 |
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| CDS TCA 72 bp | CTGGACTCCCATCACTGTGGCTTCACTGGAATTCGATaGTCATGTTCTGTATCAACATGTCTGCAATTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LDSHHCGFTGIR*SCSVSTCLQLS Trigger: ACTCAATTGCAGACATGTTGATACAGAACATGATCATCGAATTCCAGTGAAGCCACAGTGATGGGAGTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000560924.2 ENST00000663878.1 ENST00000664388.1 ENST00000664536.1 |
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| CDS TCA 72 bp | TCTTGGATTCAGCTGTTCCTGAAATCAGAGGCACACTaGACTTCCCAATCCCAAGAGGCAATAAGTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SWIQLFLKSEAH*TSQSQEAISSF Trigger: AAAGGAACTTATTGCCTCTTGGGATTGGGAAGTTCAGTGTGCCTCTGATTTCAGGAACAGCTGAATCCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS CAA 72 bp | GACCCATCTGCTGAAATCCTGAAATTGCCACAGCTGTaGCCATTTCAGCTCCTTGAATTTATGAGCACCAAT | + |
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Preference number: 6 (lower is better) Translates to: DPSAEILKLPQL*PFQLLEFMSTN Trigger: ATTGGTGCTCATAAATTCAAGGAGCTGAAATGGCAACAGCTGTGGCAATTTCAGGATTTCAGCAGATGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS CAA 90 bp | TTTGATTTTGACCCATCTGCTGAAATCCTGAAATTGCCACAGCTGTaGCCATTTCAGCTCCTTGAATTTATGAGCACCAATGCATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: FDFDPSAEILKLPQL*PFQLLEFMSTNASP Trigger: GGGAGATGCATTGGTGCTCATAAATTCAAGGAGCTGAAATGGCAACAGCTGTGGCAATTTCAGGATTTCAGCAGATGGGTCAAAATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS TCA 72 bp | GATGAGGGATACACAGAGTACATGGACATGCTAATCTaGTACCAAAGAGGAAACAAAGACACTGGGCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: DEGYTEYMDMLI*YQRGNKDTGLK Trigger: CTTTAGCCCAGTGTCTTTGTTTCCTCTTTGGTATCAGATTAGCATGTCCATGTACTCTGTGTATCCCTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560924.2 |
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| CDS TCA 72 bp | GGGACAATATGTTCTGCAAAAAGCAGAGTGAACACCTaGAATGAAACAACTCATCCCTGCATTCTGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: GTICSAKSRVNT*NETTHPCILHS Trigger: ACTGTGCAGAATGCAGGGATGAGTTGTTTCATTTCAGGTGTTCACTCTGCTTTTTGCAGAACATATTGTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664536.1 |
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| CDS TCA 72 bp | GTCAAATCCCGCTTTTGCACTTACTTGATTACCTGCTaGAATCCTGAAATTGCCACAGCTGTTGCCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: VKSRFCTYLITC*NPEIATAVAIS Trigger: TGAAATGGCAACAGCTGTGGCAATTTCAGGATTTCAGCAGGTAATCAAGTAAGTGCAAAAGCGGGATTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS CAA 90 bp | CCGTTCTTCTTGTTTGGACCCAATGGAATAGAAAATCCACAAGTTTaGTCTTTCTGCATGAAGAGTGCACTTAACCCTTTCAATGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PFFLFGPNGIENPQV*SFCMKSALNPFNAH Trigger: ATGAGCATTGAAAGGGTTAAGTGCACTCTTCATGCAGAAAGACAAAACTTGTGGATTTTCTATTCCATTGGGTCCAAACAAGAAGAACGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS CAA 72 bp | AACTTTGATTTTGACCCATCTGCTGAAATCCTGAAATaGCCACAGCTGTTGCCATTTCAGCTCCTTGAATTT | + |
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Preference number: 6 (lower is better) Translates to: NFDFDPSAEILK*PQLLPFQLLEF Trigger: AAATTCAAGGAGCTGAAATGGCAACAGCTGTGGCAATTTCAGGATTTCAGCAGATGGGTCAAAATCAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS TCA 72 bp | AACACTGTCCATAAGCCTCACCTAAATTGGCACAACTaGAAATGCCCATCTTTTCATAAGTCTATTGAACGA | + |
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Preference number: 6 (lower is better) Translates to: NTVHKPHLNWHN*KCPSFHKSIER Trigger: TCGTTCAATAGACTTATGAAAAGATGGGCATTTTCAGTTGTGCCAATTTAGGTGAGGCTTATGGACAGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS CAA 90 bp | CTGAGAAGTTCGAAAATGTGTACCGAGGTAGAAATCATCATAACTTaGTTAACAGAGGTGTCCATTTTCTTTCCAAGAGATATTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LRSSKMCTEVEIIIT*LTEVSIFFPRDIRS Trigger: GCTCCTAATATCTCTTGGAAAGAAAATGGACACCTCTGTTAACAAAGTTATGATGATTTCTACCTCGGTACACATTTTCGAACTTCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664536.1 |
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| CDS TCA 72 bp | TTCTGGGGCTACAATGTTTCAAGTCTTTGCCGAGTGTaGAAGAAATCAAATTTATCAGCTATTGAGTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: FWGYNVSSLCRV*KKSNLSAIELN Trigger: ATTCAACTCAATAGCTGATAAATTTGATTTCTTTCACACTCGGCAAAGACTTGAAACATTGTAGCCCCAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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| CDS TCA 72 bp | TTGTGGTGTTCTGACTGTTGCACAGGTGCTTGTTATTaGAGAGATAGATACATGCTCTATATAAAAGACATT | + |
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Preference number: 6 (lower is better) Translates to: LWCSDCCTGACY*RDRYMLYIKDI Trigger: AATGTCTTTTATATAGAGCATGTATCTATCTCTTCAATAACAAGCACCTGTGCAACAGTCAGAACACCACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS GCA 72 bp | CATTTGCAGTGGGTATTACTAGCAATGTTATACAGATaGAGAAACTGGGACAGTAAAACAGTAAAGAAACTT | + |
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Preference number: 6 (lower is better) Translates to: HLQWVLLAMLYR*RNWDSKTVKKL Trigger: AAGTTTCTTTACTGTTTTACTGTCCCAGTTTCTGCATCTGTATAACATTGCTAGTAATACCCACTGCAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666463.1 |
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| CDS CAA 72 bp | TCGAAAATGTGTACCGAGGTAGAAATCATCATAACTTaGTTAACAGAGGTGTCCATTTTCTTTCCAAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SKMCTEVEIIIT*LTEVSIFFPRD Trigger: ATCTCTTGGAAAGAAAATGGACACCTCTGTTAACAAAGTTATGATGATTTCTACCTCGGTACACATTTTCGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663878.1 ENST00000664536.1 |
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| CDS TCA 72 bp | GAGAAGATATTGAAGAAGGAGAGTAGGAATGTCTTTTaGAACTCAATATGCTTAATAAAGTTGAGGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: EKILKKESRNVF*NSICLIKLREN Trigger: GTTCTCCCTCAACTTTATTAAGCATATTGAGTTTCAAAAGACATTCCTACTCTCCTTCTTCAATATCTTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664388.1 |
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