Pregenerated sensors for LINC02283 (Homo sapiens)
Ensembl gene IDs: ENSG00000248184Ensembl transcript IDs: ENST00000511634.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CACTCTGTGCCTGTTAATTCCATCCTCAGCTCAAGCCGGGATCCTTaGGTTACAACAGATGCTTCTTCCCTGGGGCTTCAGCCCCCATCG | + |
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Preference number: 5 (lower is better) Translates to: HSVPVNSILSSSRDP*VTTDASSLGLQPPS Trigger: CGATGGGGGCTGAAGCCCCAGGGAAGAAGCATCTGTTGTAACTCAAGGATCCCGGCTTGAGCTGAGGATGGAATTAACAGGCACAGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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| CDS GCA 90 bp | TGCATGTGCCAGACTTGCACAAACGTTGGGCTGCCAACCACTCTGTaGCTGTTAATTCCATCCTCAGCTCAAGCCGGGATCCTTGAGTTA | + |
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Preference number: 5 (lower is better) Translates to: CMCQTCTNVGLPTTL*LLIPSSAQAGILEL Trigger: TAACTCAAGGATCCCGGCTTGAGCTGAGGATGGAATTAACAGGCACAGAGTGGTTGGCAGCCCAACGTTTGTGCAAGTCTGGCACATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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| CDS CCA 90 bp | TCAGCTCAAGCCGGGATCCTTGAGTTACAACAGATGCTTCTTCCCTaGGGCTTCAGCCCCCATCGATCAGCTTTGTTGATGAGGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: SAQAGILELQQMLLP*GFSPHRSALLMRKK Trigger: TTTCTTCCTCATCAACAAAGCTGATCGATGGGGGCTGAAGCCCCAGGGAAGAAGCATCTGTTGTAACTCAAGGATCCCGGCTTGAGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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| CDS GCA 90 bp | TTCTTCTCCAGCATAGTTGCTAATGATGTGTGCATGTGCCAGACTTaGACAAACGTTGGGCTGCCAACCACTCTGTGCCTGTTAATTCCA | + |
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Preference number: 5 (lower is better) Translates to: FFSSIVANDVCMCQT*TNVGLPTTLCLLIP Trigger: TGGAATTAACAGGCACAGAGTGGTTGGCAGCCCAACGTTTGTGCAAGTCTGGCACATGCACACATCATTAGCAACTATGCTGGAGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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| CDS GCA 72 bp | CCTCAGCTCAAGCCGGGATCCTTGAGTTACAACAGATaGTTCTTCCCTGGGGCTTCAGCCCCCATCGATCAG | + |
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Preference number: 6 (lower is better) Translates to: PQLKPGSLSYNR*FFPGASAPIDQ Trigger: CTGATCGATGGGGGCTGAAGCCCCAGGGAAGAAGCATCTGTTGTAACTCAAGGATCCCGGCTTGAGCTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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| CDS GCA 72 bp | CAGACTTGCACAAACGTTGGGCTGCCAACCACTCTGTaGCTGTTAATTCCATCCTCAGCTCAAGCCGGGATC | + |
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Preference number: 6 (lower is better) Translates to: QTCTNVGLPTTL*LLIPSSAQAGI Trigger: GATCCCGGCTTGAGCTGAGGATGGAATTAACAGGCACAGAGTGGTTGGCAGCCCAACGTTTGTGCAAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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| CDS TCA 72 bp | CCTGTTAATTCCATCCTCAGCTCAAGCCGGGATCCTTaGGTTACAACAGATGCTTCTTCCCTGGGGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: PVNSILSSSRDP*VTTDASSLGLQ Trigger: CTGAAGCCCCAGGGAAGAAGCATCTGTTGTAACTCAAGGATCCCGGCTTGAGCTGAGGATGGAATTAACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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| CDS GCA 72 bp | AGCATAGTTGCTAATGATGTGTGCATGTGCCAGACTTaGACAAACGTTGGGCTGCCAACCACTCTGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SIVANDVCMCQT*TNVGLPTTLCL Trigger: CAGGCACAGAGTGGTTGGCAGCCCAACGTTTGTGCAAGTCTGGCACATGCACACATCATTAGCAACTATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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| CDS GCA 72 bp | TTCTTCTCCAGCATAGTTGCTAATGATGTGTGCATGTaGCAGACTTGCACAAACGTTGGGCTGCCAACCACT | + |
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Preference number: 6 (lower is better) Translates to: FFSSIVANDVCM*QTCTNVGLPTT Trigger: AGTGGTTGGCAGCCCAACGTTTGTGCAAGTCTGGCACATGCACACATCATTAGCAACTATGCTGGAGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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| CDS CAA 72 bp | CTGTCAGCATCTCCCAAATGTACCTGGCTGTTTGCTTaGCTCACGAGTTCATTCATTTTAGCTATGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LSASPKCTWLFA*LTSSFILAMKL Trigger: AAGCTTCATAGCTAAAATGAATGAACTCGTGAGCAAAGCAAACAGCCAGGTACATTTGGGAGATGCTGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511634.1 |
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