Pregenerated sensors for LINC02280 (Homo sapiens)
Ensembl gene IDs: ENSG00000260792Ensembl transcript IDs: ENST00000564585.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCTCAGGGCTTCGGACTCAGACCGCACTGCACCACCAGCTTCCCTaGGTCTTCGCGGGCGTGGGACCTCTCGGCCTGCGTGGTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: LSGLRTQTALHHQLP*VFAGVGPLGLRGHL Trigger: CAGGTGACCACGCAGGCCGAGAGGTCCCACGCCCGCGAAGACCCAGGGAAGCTGGTGGTGCAGTGCGGTCTGAGTCCGAAGCCCTGAGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | CGATTAGGTCCATGGATGGTGGGTGGTGGGGCAGGTTCCTCACTGTaGGGTGGGAGCTACAGACAAGCAGGGGCAAGGGCCAGAACGACC | + |
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Preference number: 5 (lower is better) Translates to: RLGPWMVGGGAGSSL*GGSYRQAGARARTT Trigger: GGTCGTTCTGGCCCTTGCCCCTGCTTGTCTGTAGCTCCCACCCCACAGTGAGGAACCTGCCCCACCACCCACCATCCATGGACCTAATCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | GCGGGCGGAGTGACGGTTAACTTTATGTGTCAGCTCCCCTGGCCGTaGGGTGCCGGGTTGAACGTTATTTCTGGGGATGTCCGAGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: AGGVTVNFMCQLPWP*GAGLNVISGDVRGC Trigger: ACACCCTCGGACATCCCCAGAAATAACGTTCAACCCGGCACCCCACGGCCAGGGGAGCTGACACATAAAGTTAACCGTCACTCCGCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | CCTGCACACTGCAGCTTAGCGATTAGGTCCATGGATGGTGGGTGGTaGGGCAGGTTCCTCACTGTGGGGTGGGAGCTACAGACAAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PAHCSLAIRSMDGGW*GRFLTVGWELQTSR Trigger: CCTGCTTGTCTGTAGCTCCCACCCCACAGTGAGGAACCTGCCCCACCACCCACCATCCATGGACCTAATCGCTAAGCTGCAGTGTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS TCA 90 bp | ACAAACGACGAAGTCTGTGAAGCCAAAAGCAAATGGACCCGCACATaGGCCCTGTACCCTGGCAGACACACGCTTCTGCCGCGGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: TNDEVCEAKSKWTRT*ALYPGRHTLLPRGT Trigger: TGTACCCCGCGGCAGAAGCGTGTGTCTGCCAGGGTACAGGGCTCATGTGCGGGTCCATTTGCTTTTGGCTTCACAGACTTCGTCGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | ACATTCCAGAAAATTCTCTCCACCAGGCATGCCTTTGGCCAGCCCTaGGACATGTACTGCCCCTTGAGGTTTCCAGTACTCTGCCCTACC | + |
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Preference number: 5 (lower is better) Translates to: TFQKILSTRHAFGQP*DMYCPLRFPVLCPT Trigger: GGTAGGGCAGAGTACTGGAAACCTCAAGGGGCAGTACATGTCCCAGGGCTGGCCAAAGGCATGCCTGGTGGAGAGAATTTTCTGGAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS GCA 90 bp | TTCCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATaGAGAACTGTGAGTCAATTAAACCTCCTTTGTGGGCTGGGCGAG | + |
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Preference number: 5 (lower is better) Translates to: FPSTMIVSFLRPPQP*RTVSQLNLLCGLGE Trigger: CTCGCCCAGCCCACAAAGGAGGTTTAATTGACTCACAGTTCTGCATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGTGGAAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | GGGAAAATACACAGGACTTTGCTGACGGTGGAGTCCCAGGTTCTGTaGAGACCGCTAGGTCCTTTGGCCACATTCACTATTGAGGAACAC | + |
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Preference number: 5 (lower is better) Translates to: GKIHRTLLTVESQVL*RPLGPLATFTIEEH Trigger: GTGTTCCTCAATAGTGAATGTGGCCAAAGGACCTAGCGGTCTCCACAGAACCTGGGACTCCACCGTCAGCAAAGTCCTGTGTATTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | GGGTGCCGGGTTGAACGTTATTTCTGGGGATGTCCGAGGGTGTTCTaGATGAGATTAGCATTTGAATCAGTGGGCTCTGTAAAGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GCRVERYFWGCPRVF*MRLAFESVGSVKQA Trigger: GGCCTGCTTTACAGAGCCCACTGATTCAAATGCTAATCTCATCCAGAACACCCTCGGACATCCCCAGAAATAACGTTCAACCCGGCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | ACTCTCCTTCACATTCCAGAAAATTCTCTCCACCAGGCATGCCTTTaGCCAGCCCTGGGACATGTACTGCCCCTTGAGGTTTCCAGTACT | + |
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Preference number: 5 (lower is better) Translates to: TLLHIPENSLHQACL*PALGHVLPLEVSST Trigger: AGTACTGGAAACCTCAAGGGGCAGTACATGTCCCAGGGCTGGCCAAAGGCATGCCTGGTGGAGAGAATTTTCTGGAATGTGAAGGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | ACACAGACACACACACAAACACACACACACCCTTCACAACCTTCCTaGGCTCTTAGCATTTTCTGTGGGGCTGTCAAGGCAGGAAGATCC | + |
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Preference number: 5 (lower is better) Translates to: TQTHTQTHTHPSQPS*ALSIFCGAVKAGRS Trigger: GGATCTTCCTGCCTTGACAGCCCCACAGAAAATGCTAAGAGCCCAGGAAGGTTGTGAAGGGTGTGTGTGTGTTTGTGTGTGTGTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | ACATGTGATCTGCAAATGATGGCAGATGACTGTGTGAGGTGGCCTTaGGAATGTCATGGCTCCTCTCCACAGCACTCTCCTTCACATTCC | + |
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Preference number: 5 (lower is better) Translates to: TCDLQMMADDCVRWP*ECHGSSPQHSPSHS Trigger: GGAATGTGAAGGAGAGTGCTGTGGAGAGGAGCCATGACATTCCCAAGGCCACCTCACACAGTCATCTGCCATCATTTGCAGATCACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 90 bp | ACACTGCTGCAAGTAACCTGCTCTAAATGTGGGTCTCTTTCCTGCTaGGACCCTGATAGATCTAAGGGTTTCTCCCAGGAATTCAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: TLLQVTCSKCGSLSC*DPDRSKGFSQEFKE Trigger: TTCCTTGAATTCCTGGGAGAAACCCTTAGATCTATCAGGGTCCCAGCAGGAAAGAGACCCACATTTAGAGCAGGTTACTTGCAGCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | CACTGCACCACCAGCTTCCCTGGGTCTTCGCGGGCGTaGGACCTCTCGGCCTGCGTGGTCACCTGCGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: HCTTSFPGSSRA*DLSACVVTCAQ Trigger: CTGGGCGCAGGTGACCACGCAGGCCGAGAGGTCCCACGCCCGCGAAGACCCAGGGAAGCTGGTGGTGCAGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | CTTCGGACTCAGACCGCACTGCACCACCAGCTTCCCTaGGTCTTCGCGGGCGTGGGACCTCTCGGCCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: LRTQTALHHQLP*VFAGVGPLGLR Trigger: ACGCAGGCCGAGAGGTCCCACGCCCGCGAAGACCCAGGGAAGCTGGTGGTGCAGTGCGGTCTGAGTCCGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | CCATGGATGGTGGGTGGTGGGGCAGGTTCCTCACTGTaGGGTGGGAGCTACAGACAAGCAGGGGCAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PWMVGGGAGSSL*GGSYRQAGARA Trigger: GGCCCTTGCCCCTGCTTGTCTGTAGCTCCCACCCCACAGTGAGGAACCTGCCCCACCACCCACCATCCATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | CTCGGCCTGCGTGGTCACCTGCGCCCAGGCTTCAGCTaGCATTTCCCCTGCTTGAACTTCTTTCTCGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: LGLRGHLRPGFS*HFPCLNFFLVP Trigger: CGGCACGAGAAAGAAGTTCAAGCAGGGGAAATGCCAGCTGAAGCCTGGGCGCAGGTGACCACGCAGGCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CAA 90 bp | CTGCGTGGTCACCTGCGCCCAGGCTTCAGCTGGCATTTCCCCTGCTaGAACTTCTTTCTCGTGCCGCCTTGTGAGAAGGCACCTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LRGHLRPGFSWHFPC*NFFLVPPCEKAPAS Trigger: GGAAGCAGGTGCCTTCTCACAAGGCGGCACGAGAAAGAAGTTCAAGCAGGGGAAATGCCAGCTGAAGCCTGGGCGCAGGTGACCACGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | TGCAGCTTAGCGATTAGGTCCATGGATGGTGGGTGGTaGGGCAGGTTCCTCACTGTGGGGTGGGAGCTACAG | + |
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Preference number: 6 (lower is better) Translates to: CSLAIRSMDGGW*GRFLTVGWELQ Trigger: CTGTAGCTCCCACCCCACAGTGAGGAACCTGCCCCACCACCCACCATCCATGGACCTAATCGCTAAGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | GGCGGAGTGACGGTTAACTTTATGTGTCAGCTCCCCTaGCCGTGGGGTGCCGGGTTGAACGTTATTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GGVTVNFMCQLP*PWGAGLNVISG Trigger: CCCAGAAATAACGTTCAACCCGGCACCCCACGGCCAGGGGAGCTGACACATAAAGTTAACCGTCACTCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CAA 72 bp | CACCTGCGCCCAGGCTTCAGCTGGCATTTCCCCTGCTaGAACTTCTTTCTCGTGCCGCCTTGTGAGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: HLRPGFSWHFPC*NFFLVPPCEKA Trigger: TGCCTTCTCACAAGGCGGCACGAGAAAGAAGTTCAAGCAGGGGAAATGCCAGCTGAAGCCTGGGCGCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS TCA 72 bp | GAAGTCTGTGAAGCCAAAAGCAAATGGACCCGCACATaGGCCCTGTACCCTGGCAGACACACGCTTCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: EVCEAKSKWTRT*ALYPGRHTLLP Trigger: CGGCAGAAGCGTGTGTCTGCCAGGGTACAGGGCTCATGTGCGGGTCCATTTGCTTTTGGCTTCACAGACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS GCA 72 bp | ACCAGGCATGCCTTTGGCCAGCCCTGGGACATGTACTaGCCCTTGAGGTTTCCAGTACTCTGCCCTACCTTT | + |
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Preference number: 6 (lower is better) Translates to: TRHAFGQPWDMY*PLRFPVLCPTF Trigger: AAAGGTAGGGCAGAGTACTGGAAACCTCAAGGGGCAGTACATGTCCCAGGGCTGGCCAAAGGCATGCCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | GTGACGGTTAACTTTATGTGTCAGCTCCCCTGGCCGTaGGGTGCCGGGTTGAACGTTATTTCTGGGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: VTVNFMCQLPWP*GAGLNVISGDV Trigger: GACATCCCCAGAAATAACGTTCAACCCGGCACCCCACGGCCAGGGGAGCTGACACATAAAGTTAACCGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CAA 90 bp | TCCACCAGGCATGCCTTTGGCCAGCCCTGGGACATGTACTGCCCCTaGAGGTTTCCAGTACTCTGCCCTACCTTTATAAAGAGCCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: STRHAFGQPWDMYCP*RFPVLCPTFIKSPF Trigger: AAAGGGGCTCTTTATAAAGGTAGGGCAGAGTACTGGAAACCTCAAGGGGCAGTACATGTCCCAGGGCTGGCCAAAGGCATGCCTGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | CACAGGACTTTGCTGACGGTGGAGTCCCAGGTTCTGTaGAGACCGCTAGGTCCTTTGGCCACATTCACTATT | + |
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Preference number: 6 (lower is better) Translates to: HRTLLTVESQVL*RPLGPLATFTI Trigger: AATAGTGAATGTGGCCAAAGGACCTAGCGGTCTCCACAGAACCTGGGACTCCACCGTCAGCAAAGTCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | CACATTCCAGAAAATTCTCTCCACCAGGCATGCCTTTaGCCAGCCCTGGGACATGTACTGCCCCTTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: HIPENSLHQACL*PALGHVLPLEV Trigger: AACCTCAAGGGGCAGTACATGTCCCAGGGCTGGCCAAAGGCATGCCTGGTGGAGAGAATTTTCTGGAATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | CTGCAAATGATGGCAGATGACTGTGTGAGGTGGCCTTaGGAATGTCATGGCTCCTCTCCACAGCACTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LQMMADDCVRWP*ECHGSSPQHSP Trigger: AGGAGAGTGCTGTGGAGAGGAGCCATGACATTCCCAAGGCCACCTCACACAGTCATCTGCCATCATTTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CAA 72 bp | CATGCCTTTGGCCAGCCCTGGGACATGTACTGCCCCTaGAGGTTTCCAGTACTCTGCCCTACCTTTATAAAG | + |
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Preference number: 6 (lower is better) Translates to: HAFGQPWDMYCP*RFPVLCPTFIK Trigger: CTTTATAAAGGTAGGGCAGAGTACTGGAAACCTCAAGGGGCAGTACATGTCCCAGGGCTGGCCAAAGGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CAA 72 bp | AAGCAACTGAAACACGATGGGAAAATACACAGGACTTaGCTGACGGTGGAGTCCCAGGTTCTGTGGAGACCG | + |
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Preference number: 6 (lower is better) Translates to: KQLKHDGKIHRT*LTVESQVLWRP Trigger: CGGTCTCCACAGAACCTGGGACTCCACCGTCAGCAAAGTCCTGTGTATTTTCCCATCGTGTTTCAGTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS TCA 72 bp | TCCAGATCTAGCAGCAGCTCTCATGACCAACAGTGTTaGAGCAGGAACAAAAATGAGGCTTCAAGACGCCGA | + |
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Preference number: 6 (lower is better) Translates to: SRSSSSSHDQQC*SRNKNEASRRR Trigger: TCGGCGTCTTGAAGCCTCATTTTTGTTCCTGCTTCAACACTGTTGGTCATGAGAGCTGCTGCTAGATCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS GCA 72 bp | ACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATaGAGAACTGTGAGTCAATTAAACCTCCTTTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: TMIVSFLRPPQP*RTVSQLNLLCG Trigger: CCCACAAAGGAGGTTTAATTGACTCACAGTTCTGCATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | CAAGTAACCTGCTCTAAATGTGGGTCTCTTTCCTGCTaGGACCCTGATAGATCTAAGGGTTTCTCCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: QVTCSKCGSLSC*DPDRSKGFSQE Trigger: TTCCTGGGAGAAACCCTTAGATCTATCAGGGTCCCAGCAGGAAAGAGACCCACATTTAGAGCAGGTTACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS GCA 72 bp | CGTGAACGACATTGTAATGGCAGAGACACGACACTGTaGATCTGTCAAAACCCACAGAACTTCACAGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: RERHCNGRDTTL*ICQNPQNFTAR Trigger: TCTTGCTGTGAAGTTCTGTGGGTTTTGACAGATGCACAGTGTCGTGTCTCTGCCATTACAATGTCGTTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS CCA 72 bp | GTTGAACGTTATTTCTGGGGATGTCCGAGGGTGTTCTaGATGAGATTAGCATTTGAATCAGTGGGCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: VERYFWGCPRVF*MRLAFESVGSV Trigger: TACAGAGCCCACTGATTCAAATGCTAATCTCATCCAGAACACCCTCGGACATCCCCAGAAATAACGTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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| CDS TCA 72 bp | GCATCTGTCAAAACCCACAGAACTTCACAGCAAGAGTaGGCCTTAATGTATGCAAATTTTAAAGCTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: ASVKTHRTSQQE*ALMYANFKAQS Trigger: TGACTGAGCTTTAAAATTTGCATACATTAAGGCTCACTCTTGCTGTGAAGTTCTGTGGGTTTTGACAGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564585.1 |
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